Sinocyclocheilus grahami (golden-line barbel): 107579619
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Entry
107579619 CDS
T04918
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase-like
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107579619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgh03400
]
107579619
Enzymes [BR:
sgh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
107579619
DNA repair and recombination proteins [BR:
sgh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
107579619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
107579619
NCBI-ProteinID:
XP_016120912
UniProt:
A0A672P5Y2
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MPKRAKKNEEAVDGETGNGAEPAKKEKKGKEPEAPILYEDPPDKMTSKDGRAANMKITSW
NVDGLRAWVKKKGLDWVRKEDPDVICLQETKCAEKALPSEITDMPEYPHKYWAASEGKEG
YSGVAMLCKSEPLNVTYGIGKEEHDKEGRVITAEFPSFFLVTAYVPNASRGLVRLDYRKT
WDVDFRAYLSDLDKRKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREGFTELLEAG
FTDSFRALYPEQANAYTFWTYMMNARAKNVGWRLDYFLLSSALLPGLCDSKIRNTAMGSD
HCPITLYLAV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaagagccaagaagaatgaggaagctgtggatggggagactggcaatggagct
gaacctgcaaagaaagagaaaaaggggaaagagccagaggctccgattctgtacgaagat
cctcctgataagatgaccagtaaagatggccgtgcggccaacatgaagatcacctcctgg
aatgtggacggtcttcgtgcatgggtcaaaaagaaaggccttgattgggtgcgtaaggag
gatccagacgtgatttgtctgcaggaaacaaagtgtgctgagaaagccctgccatctgag
atcactgacatgcctgagtatccgcacaagtactgggctgcatcagagggtaaggaaggt
tacagcggagtggccatgctctgcaagtctgaaccgctcaatgtcacctacggtattggt
aaagaggaacatgataaagagggccgagttatcactgctgagtttccgtctttcttcctg
gtcacggcatatgtgcccaatgccagccgtggtctggtgcggctcgactaccgcaagacc
tgggacgtggatttccgtgcctacctgagcgacttggacaagcgcaagccgctggtgctg
tgtggagatctgaatgtggcccaccaagagattgatctcaaaaaccccaagggtaaccgc
aagaacgcaggcttcaccccagaggaacgtgagggcttcaccgaacttctcgaggccggt
tttaccgacagttttcgggcgctgtatccagaacaagccaatgcctacaccttctggacc
tacatgatgaacgcacgagccaaaaacgtcggctggcgtttggactactttttgctgtcg
tctgccttactcccgggtctatgtgacagcaagatccgaaatacggccatgggaagtgac
cactgtcctattaccctgtatttggcagtgtag
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