KEGG   Sinocyclocheilus grahami (golden-line barbel): 107580738
Entry
107580738         CDS       T04918                                 
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107580738
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sgh03021]
    107580738
   03036 Chromosome and associated proteins [BR:sgh03036]
    107580738
Transcription machinery [BR:sgh03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     107580738
   Coactivators
    SAGA/TFTC/STAGA complex
     107580738
Chromosome and associated proteins [BR:sgh03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     107580738
    STAGA complex
     107580738
    TFTC complex
     107580738
    SAGA complex
     107580738
    SLIK complex
     107580738
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_SCAP ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_SPT8 RMC1_N Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_HPS5 PROPPIN Beta-prop_IP5PC_F Ge1_WD40 Beta-prop_WDR75_2nd PEP5_VPS11_N WD40_like Beta-prop_DCAF12 WDR54 WD_LRWD1 eIF2A Nbas_N Cytochrom_D1 DUF7165 Mala_s_1-like
Other DBs
NCBI-GeneID: 107580738
NCBI-ProteinID: XP_016121871
LinkDB
Position
Unknown
AA seq 265 aa
ADDEDALGSEIKTLRAHSGPVYCTAFLTDGSGLLSCSEDSTVRLWDLSSFTNTVLYRGHA
YPVWDVDVSPCSLYFSTASHDRTACLWSFARTYPLRLYAGHLSDVNCVKFHPNSNYVATG
STDKTVRLWSTQQGASVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGSLFK
DLRGHSDSITSLSFSQDSSLVASASMDNSVRVWDIRGAHGSAPSDGSSSELIGQYTGSTS
NILNVQFMACNLLLVTGTALEKQEQ
NT seq 798 nt   +upstreamnt  +downstreamnt
gccgatgacgaggatgccttgggcagtgagataaagaccctgcgtgctcacagcggtccc
gtgtactgcacggcgttcctgacggacggctccggcctgctgtcctgttcggaggactcc
accgtgcgcctctgggacctgagcagcttcacgaacaccgtcctgtaccgcggccatgcc
taccccgtctgggacgtggacgtcagtccctgcagcctctacttctccacggcgtcccac
gaccgcaccgcgtgcctctggagcttcgcacgcacctatccgctgcgtctgtatgccgga
cacctctccgacgtcaactgtgtcaaattccacccgaactccaactacgtggcgacgggc
tccacggataaaaccgtgcgcctgtggagcacgcagcagggggcgtccgtgaggctgttc
accgggcaccgcgggcccgtgctgtcgctcgccttctcgcccaacggcaaatacctggcc
tcggccggagaggaccagagactgaagctgtgggatctggcgtccggcagcctgttcaaa
gacctgcggggtcacagcgacagcatcaccagtctctctttcagtcaggacagcagtctg
gtggcctccgcctccatggacaactcagtgcgggtctgggacatacgcggcgcccacggc
agcgcccccagcgatggctccagcagcgagctaatcggacagtacacaggcagcactagc
aacatcctcaatgtgcagttcatggcctgcaacctgctgctggtgacgggcactgcactg
gagaaacaggaacagtga

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