Sinocyclocheilus grahami (golden-line barbel): 107581559
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Entry
107581559 CDS
T04918
Name
(RefSeq) thrombospondin-2-like isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04145
Phagosome
sgh04510
Focal adhesion
sgh04512
ECM-receptor interaction
sgh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107581559
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107581559
09144 Cellular community - eukaryotes
04510 Focal adhesion
107581559
09142 Cell motility
04820 Cytoskeleton in muscle cells
107581559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107581559
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgh04147
]
107581559
00536 Glycosaminoglycan binding proteins [BR:
sgh00536
]
107581559
Membrane trafficking [BR:
sgh04131
]
Endocytosis
Phagocytosis
Opsonins
107581559
Exosome [BR:
sgh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107581559
Exosomal proteins of colorectal cancer cells
107581559
Exosomal proteins of bladder cancer cells
107581559
Glycosaminoglycan binding proteins [BR:
sgh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107581559
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CCN
EGF_3
TSP1_ADAMTS
Laminin_G_3
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
107581559
NCBI-ProteinID:
XP_016122647
UniProt:
A0A672L137
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MILRRCLRMMALLLLYTSVKSQDAQLEDETVFDLFETSGLTRKTIGVKLFKGLDSDAPAY
RFIRFDQLPSVSSSALQKLLLQIQNNEGFILTATLRQDRTSCGTILALEGPGERRQFEVV
SDGRTNTLDLVYWWADGSRNVISFEDVDLSDSQWKNVTLYVHGETATLYIGCGLIDSFIL
DEPFYEHLSGTGGRMYVAKGATRESHFRGLLQNVRFIFDTPLEDILESRGCDLGNPVEVN
VVSESEEEVEVPSSIATNVIGQNTDVPATSSSELMCERSCEELANLFQELKGLRVVVSNL
IDGLQKVTEENTAMKEVLNKMQSLSEQTMCWQDGRMFEDKEDWIVDSCTKCTCQEGKVVC
RQITCPPVACANPSFIDGECCPVCLPMDREDGWSPWSEWTQCTVTCGSGTQQRGRSCDDT
SNACSGPSIQTRKCSLGKCDRRVRQDGGWSLWSPWSSCSVTCGEGLITRIRHCNAPVPQR
GGKDCEGDGRETQSCNTDPCPIDGGWGPWSPWTKCSATCGGGLKSRVRECNSPEPQHGGR
KCLGDSIENEVCNRQECPIDGCLSNPCFSGVECITASDGSWECGPCPNGYRGNGTSCEDV
NECDMVSDLCHKVGGLQQCVNTDPGFNCLPCPPRYKGTQPYGMGVESAKTNKQVCEPYNP
CKDNSHSCHKYAACIFLSHFSDPMYKCECRIGYAGDGIICGEDFDLDGWPNQDLVCGANA
TYHCKKDNCPTLPNSGQEDFDNDGQGDACDKDDDNDEIVDERDNCPLMYNPRQYDYDKDD
VGDRCDNCPYEHNPAQTDTDNNGEGDACSIDMDGDEILNERDNCPLIYNTDQKDTDLDGV
GDQCDNCPLVHNPQQTDADNDLIGDQCDDNQDIDEDGHQNNMDNCPYIANANQADHDGDG
KGDSCDFDDDNDGIPDDRDNCRLVSNKDQTDSDGDGRGDACENDFDNDKVPDIFDACPEN
NAISVTDFRKFQMVHLDPKGTTQIDPNWVVRNQGKELVQTANSDPGIAVGFDEFSAVDFS
GTFYVNTDRDDDYAGFVFGYQSSRRFYVVMWKQITQTYWEEKPSKAFGISGVSLKVVNST
TGTGEILRNALWHTGNTKQQVRTLWHDPKNIGWKDYSAYRWHLIHRPKTGFIRVVVYEGK
QIMADSGPIYDKTFAGGRLGLFVFSQEAVFFSDLKYECRDN
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgattctccgacgatgtcttcgaatgatggcccttttgcttctgtacacctccgtaaaa
tctcaagatgcacaactggaagatgagacggtttttgacttgtttgaaaccagtgggctc
acacgcaagactatcggtgtgaagcttttcaaaggcctggacagtgatgctccagcatac
cgcttcatccgttttgaccagctcccctcagtcagctcctccgcgctacaaaaacttctt
ttgcagatacaaaacaatgaaggcttcattctgacagccactctgcgccaggaccgcaca
tcctgtggcaccattcttgcactggaaggccccggagagcgcagacagtttgaagttgtt
tcggacggaagaactaacactttagatttggtgtactggtgggctgatggctcacgcaat
gtgatctcttttgaggatgtagacctctcggattcacagtggaagaatgtaacactctat
gtgcatggagagacggcaactttgtacattggttgtggacttattgatagcttcattctc
gatgaacctttctatgaacacctgagcggcacaggtggtcgtatgtatgtggccaaaggg
gccacacgagaaagccattttaggggcttgctgcagaatgtacgttttatctttgacacc
ccacttgaggacattctggagagcaggggatgtgatcttggaaacccagtggaggtgaat
gtagtcagcgagagtgaagaggaggtggaggttccatcttcaattgccaccaacgtgatt
ggccagaatacagatgttccagcaaccagctcctcagaactgatgtgtgaacgttcctgt
gaagaactggccaacctcttccaggagctcaagggtctcagagttgtcgttagcaacctc
atagatggtctgcagaaagtgacagaagaaaacacggcgatgaaggaggtactaaataag
atgcagagtctttcggagcagactatgtgttggcaagatggtcgtatgtttgaggacaaa
gaggactggattgtggatagctgtactaaatgtacctgccaagaaggaaaagttgtttgt
cgtcagatcacttgtcctccagtggcatgtgccaatccatccttcatcgatggcgaatgc
tgtccagtttgccttccaatggacagggaggatggctggtctccatggtcagagtggact
cagtgcacagtcacatgtggaagtggcactcaacagagggggcgctcttgtgatgacaca
agcaatgcatgttctggaccctcgattcagacacgcaaatgcagtttgggaaaatgtgac
cgcagagttcgtcaggacggtggctggagcttatggtctccgtggtcatcctgctcagtg
acgtgtggagagggactgatcacacgtatccgccactgcaatgctcctgttccacaaaga
ggtggaaaggactgtgaaggtgatggacgagagacacagagctgcaacacagacccctgt
ccgattgatggtggctggggtccatggtctccttggacaaaatgttcggctacatgtgga
gggggtctgaagagtcgtgttagggagtgtaatagccctgaaccacagcatggaggacgg
aagtgtcttggagactccattgaaaatgaagtatgcaaccgacaggagtgtcctattgat
ggctgtctttcgaacccttgcttctccggagtcgagtgtatcacagcttctgatggatcc
tgggaatgtggaccctgcccaaatggttaccgtggcaatggaacttcctgtgaagatgtc
aatgagtgcgatatggtatcagatctgtgtcataaggtgggtggcctacagcaatgtgtg
aatacagaccccggattcaactgtctcccctgccccccgcgctacaaaggaactcagccc
tacggcatgggagtggagtcagctaaaaccaacaaacaggtgtgtgaaccctacaacccc
tgcaaggacaacagccacagttgccacaagtatgctgcatgcatcttccttagtcacttc
agtgacccgatgtacaagtgtgagtgccgtattggttatgctggagatggcatcatctgt
ggagaggactttgatctggatggatggcccaaccaagatcttgtgtgtggagcaaatgcc
acctaccattgcaaaaaggacaactgtccgactttacccaactctggtcaggaggacttt
gacaatgatgggcaaggagatgcttgtgacaaagatgatgataatgatgaaattgtggat
gaaagggacaactgccccctgatgtataatcccaggcagtatgactatgacaaggatgat
gttggagaccgttgcgataactgcccatatgagcataaccctgctcagaccgacactgac
aacaatggggaaggagatgcctgttctattgacatggatggagatgagattctaaacgag
cgagacaactgccctctcatttacaacacagaccagaaagacacagatttagatggtgtc
ggagaccagtgtgataactgccccttagttcacaacccacaacagacggatgcagataat
gatctaattggagaccagtgtgatgacaaccaggacatagatgaagatggccatcaaaat
aacatggataactgcccatacatagccaatgctaaccaagccgaccacgacggagacggg
aaaggagattcttgtgattttgatgatgataatgatggcattcctgatgaccgggataac
tgcagactagtttccaacaaggaccaaacagactctgatggtgatggccgtggtgacgcc
tgtgagaatgatttcgacaatgacaaagtcccggatatcttcgatgcgtgcccggaaaac
aatgccatcagtgtcacagatttccggaagtttcaaatggttcacctcgaccccaaggga
accacgcagattgatcccaactgggtggtccgaaaccaaggcaaagagcttgtgcaaact
gccaactccgaccctggaattgcagtgggctttgatgagttcagcgctgtggatttcagc
gggaccttctatgtgaatacagacagggatgatgactatgcaggttttgtgtttggatac
cagtctagccgacgtttttacgtagtaatgtggaaacagatcacgcagacgtactgggaa
gagaagccatcaaaggcatttggcatctctggtgtctctctcaaggtggtcaactccacc
acaggcactggggaaattctacgcaatgcattatggcacacaggcaacaccaaacagcag
gtgcgcactctgtggcatgacccgaagaatatcggctggaaagactattccgcctaccgc
tggcatctcatccacagaccgaagactggcttcattagagttgttgtgtatgaaggaaag
cagatcatggcagactcaggccccatttatgacaagacgtttgcaggtggaagactcggg
ttattcgttttctcccaggaggccgtcttcttctctgacctcaaatatgaatgcagagat
aattga
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integrated database retrieval system
