Sinocyclocheilus grahami (golden-line barbel): 107581608
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Entry
107581608 CDS
T04918
Name
(RefSeq) collagen alpha-1(XIV) chain-like
KO
K08133
collagen type XIV alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sgh00535
]
107581608
Proteoglycans [BR:
sgh00535
]
Extracellular matrix (ECM) proteoglycans
Others
107581608
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
FN3_DSCAM-DSCAML_C
Fn3_PBP1
Fn3_VIN3
Pur_ac_phosph_N
Ig_ANOS1
Motif
Other DBs
NCBI-GeneID:
107581608
NCBI-ProteinID:
XP_016122724
LinkDB
All DBs
Position
Unknown
AA seq
1652 aa
AA seq
DB search
MRVSGSRIKLWCPLISLALIQFLTPVSAQVPAPRRLRFKVLSAGRLLVSWKEPKGEYDGY
KFIYNSEPGGETSELQIARGENKAIIKDFNPRKEYSVKVIAVSGNLHSRALQGKYTAEDQ
SSDGDTTQSQRLKEPGPVEEGNEISGVDQFVCTTSAIADIVILVDGSWSIGRINFRLVRM
FLENLVSAFDVGIDKTRIGLAQYSGDPRIEWHLNGFSTKDAVIDAVKNLPYKGGNTLTGL
ALTYILENSFKPESGARSNVPKIGILITDGKSQDDVIPPAQTLRSAGVELFAIGVKNADE
NELKAIASEPEETHVYNVADFSIMSTIVDGLTNKVCDGVEQQDKEIKRDSSTEETASPPQ
DLVTSEVTAHSFRVTWTHTPGSVEKYRVVYHPTGADILEEIVVGGTKKSVVLQNLNSLTE
YEIAVFAVYRSAASDALRGSEITLALPTVSDLKVYDVTDNSMRARWRDAEGASGYMILYA
PLSSETTDERELKVDESVTDVELTGLIPDSEYTVTVYAMFGEEASDPATVQETTMSLRPP
HNLWVTEVDHSSVRLNWDAASSKVKGYRVMYMKTDGVQTSEVDLGPVTNVYLKNLSPLTE
YTVAVFALYNAGQSEALSGGFTTKLVPAPFSLMTSEVTSESFRVSWSHPARDVVLYKMNW
SPTEGGEEREMMLDGAVDSYVIQNMSPFTEYKVSLSAIYKDETESSVVVVLENTLGWTTE
VPTTFPSTTAFVHLGVSNLWVDEETPFSMQVNWEVLDSDVEQYKVTYVSADRTEETVLVS
GNRRSVTLQPLLSDTRYKITVTPFYADGESTALAMASTGKTIPLSGPSNLRVSDEWYNRF
RISWDSPQFPTMGYRVIYQPISVPGPALETFVGDDVNTLLILSLLSDTEYSVQVIASYTT
GSSQPLTSKGKTLFLGVNRLSTYQVLSSSMCAQWQPHRHATVYRVVIESLLTPAPTQPPT
APPTTIPPPTIPPAKEVCKAAKADLAFLVDGSWSIGDDNFQKIIRFLYSTTGALDVIGPE
GTQVAIVQFSDDARTEFKLSSYSDKEALLDAVQRITYKGGNTKTGMYLNPQTCPSMLMSG
NTLAGFRMMEMFGLVEKHYSNVQGVSLEPGTFNSYPCYRLHKDALVSQPTRYLHPEGLPS
DYTISMLFRILPETPQEPFALWEILDKNNEPLVGIILDNGGKTLTFFNSDYKGEFQTVTF
EGSEIKKIFYGSFHKLHVAISKTAAKVVIDCKTVGEKSINAAGNITIDGVEILGRMVHSR
GRRDNSAPFQLQMFDIVCSTSWASRDKCCELPGLRVEEDCPAMPHACTCAQDSKGPPGPS
GPPGGPGIRGSRGDRGEPGLTETAGHSHFVSAARLVGPQGPPGEIGSPGPQGPPGPQGPN
GLSIQGSPGAPGEKGEKGEIGLPGPQGVPGASGGPGRDGPPGQRGLLGKDGPQGRQGPPG
PMGSPGAPGAPGPSGSPGQIGDQGPPGPPGTKGERGERGDMQSQAAVRAIARQVCEQLIQ
SHLSRYNSILNQIPSQSVSVRTVPGPPGEPGRSGPPGPQGEQGPAGRPGFPGASGQNGRP
GERGLPGERGEKGSPGIGTQGPRGPPGPPGSPGEGRTGSQGPPGRPGIQGTSGRPGIPGS
PGPAGSPGYCDQNSCLRYNVGDGNRSNSPMFP
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgtcgggatcgaggattaagctgtggtgtccgcttatctcgctggcactgatt
cagtttcttacccctgtttcggctcaagttccagctccaagaagacttcgatttaaagtt
ctgagtgcaggcaggctacttgtctcatggaaggaaccaaaaggagaatatgatggctac
aaatttatatataatagtgaaccaggtggggaaacaagcgagttgcaaattgcaagggga
gagaataaagcaataataaaggattttaatcccaggaaggagtattcagtcaaggttata
gctgtgagtggaaacctgcacagccgagcacttcagggaaaatatactgcagaagaccag
agcagtgatggagacaccactcagtctcaaagactgaaagaaccaggacctgtggaagag
ggaaatgagatctcaggagtggatcagtttgtctgcacaacttctgcaattgcggatatt
gtcatcctggtcgatggatcttggagtattgggcgaatcaatttccgtctggttcgcatg
ttccttgaaaacctggtcagtgccttcgatgtgggaatagacaaaacccggattggactg
gcccagtacagcggggatccacgaattgagtggcacttgaatggcttcagcacaaaagat
gcagtaatagatgctgtcaaaaacctgccatacaagggaggcaacactctcacaggtctt
gctcttacctacatcctggagaacagcttcaaacctgagtctggggctcgtagcaatgtt
cccaaaattggaattctgataactgacggcaaatcccaggatgatgttatccctcctgct
cagaccctgagaagtgctggagtcgagttatttgccattggtgtgaagaatgctgatgag
aacgagctgaaggccatcgcctctgaaccagaggaaacacacgtttataatgtggcagac
ttcagtatcatgagcactatagtggatgggctgaccaataaggtgtgtgatggagtggag
caacaagacaaagaaattaaacgagattcttccactgaagagacggcgtctccaccccaa
gacttggtcacttctgaggtgactgcacacagttttcgagtgacctggactcatacgcct
ggcagtgtggaaaaatatcgagttgtttaccatccaaccggggcagatattctggaagag
attgtggtgggtggcacgaagaaatcagtcgtcttgcagaatttgaactctctgactgaa
tacgagattgctgtgttcgctgtgtaccgcagcgcagcaagtgacgctctgagaggcagc
gagatcacgctggctctgccaacagtgagtgatctcaaggtgtacgatgtgacagacaac
agcatgagagcccgctggagggatgcagaaggggcttctgggtacatgatcctttacgct
ccactgagcagtgagactacagatgaaagagagctaaaggtggatgagtcggtgactgat
gtggaactgactggattgattcctgactcagagtacaccgttacagtctatgccatgttc
ggagaggaggccagtgatcccgctactgttcaggagaccaccatgtccctgagacctcca
cataacctgtgggtcactgaagttgaccacagctctgtgcgactcaactgggacgcagca
tccagtaaggttaagggctaccgtgtcatgtatatgaagacagatggtgtccagaccagt
gaggtggatttgggtccagtcaccaatgtgtacctgaagaacctgtcacccttaacagag
tacaccgttgcagtttttgctctctacaatgccggccaatcagaggcactcagtggtgga
ttcactacaaagcttgtgccggccccgttcagcctgatgacatcagaggtgacctcagag
agtttccgggtcagctggtcacatcctgccagggatgtggtgctctataagatgaactgg
tcacccactgaaggaggagaagagagagagatgatgctggatggagctgtggactcatat
gtgattcaaaacatgagtccttttacagagtataaggtgtcactgtcagccatctataaa
gacgaaacggagagcagcgttgtggttgtgctcgagaatacattgggctggaccacagaa
gttcccaccactttcccctccactacagcatttgttcatctgggagtgagtaacctgtgg
gtggatgaggagacccccttcagtatgcaagtgaactgggaggtgctggactcagacgtg
gagcagtacaaagtgacatatgtcagtgcagaccgcacagaagagacagtgttagtctcg
ggaaacagaagaagcgtaaccctgcaacctctcctctcagacacgaggtacaagatcaca
gtgacccctttttatgcagatggagagtccacagctctggccatggcctcaaccggcaaa
acaattccactttctggacccagtaaccttagggtgtctgatgaatggtataatcgcttc
cgcatcagctgggacagccctcagttccctactatgggttacagagtcatctaccagccc
atctctgtgccaggtccggctctagagacgtttgtaggggatgatgtgaacaccctgctg
atcctcagtctgttgagcgacacggagtacagcgttcaggtcatcgcctcctacaccacc
ggctccagccaacccctcaccagcaagggcaaaacattgtttctgggggtgaaccgtctc
agcacataccaggtgctcagtagcagcatgtgtgcccagtggcaacctcaccgccacgcc
accgtctacagagtagtcattgagtcactgcttactccagcacccacccagccaccgacc
gcaccacccaccacgatccctcctcccaccatcccccctgccaaagaagtttgcaaagca
gccaaggcagacctggccttccttgtagatggctcctggagtattggagatgacaacttt
cagaagattatccgtttcctatacagcacaactggtgcacttgatgtgattggcccagag
ggaacacaggtggccattgttcaattcagtgatgacgccaggactgagttcaagctcagc
tcctacagcgataaggaggctctgctggacgccgtgcagcgcatcacctacaagggagga
aacaccaagacaggcatgtatctcaatcctcagacttgcccctcgatgttgatgagcgga
aacactttagctggtttccgtatgatggagatgtttggtttggtcgagaagcactacagc
aatgtgcaaggtgtctcactggagcctgggactttcaacagctacccctgctaccggttg
cacaaggacgccctcgtctcccagcctaccaggtatctacatccagaaggccttccctct
gactacactatatctatgctgttccgcatactgcctgaaactcctcaggaaccttttgca
ttgtgggaaatccttgacaaaaacaatgagccactggtgggcattatcctggataacgga
gggaaaacattaaccttcttcaattccgactacaagggagaatttcaaacggtgactttc
gaaggaagtgaaattaagaagattttctatggcagtttccataagcttcatgtggccatc
agcaaaaccgctgctaaagtggtgattgactgcaaaacggtgggagagaaatccatcaat
gctgcagggaacatcaccattgatggagtggagattctgggacgcatggtccactcgcgt
ggaaggagagataactcagcgccgtttcagctccagatgtttgacatagtctgcagtaca
tcatgggccagtcgggataagtgctgtgagcttccaggcttgagagtagaagaggactgc
cctgccatgccccatgcctgcacctgtgctcaggatagcaaaggaccacctggaccctca
ggacccccgggcggtcctggtatcagaggttcaagaggagatcggggggagccaggcttg
acggagactgccgggcattcacactttgtttcagcagcccggctggtggggcctcaaggg
ccacctggtgagattggatctccaggaccgcagggaccaccgggtcctcaggggccgaat
ggactgtccattcaggggtcaccgggggctccaggagagaaaggagagaagggtgaaatt
ggtctgccaggtcctcagggtgtaccaggtgccagtggaggaccaggccgagatggacct
ccaggacagagaggcctactgggtaaagatggaccccagggacgacagggtcctccagga
ccaatgggaagccctggagctcctggggctccaggaccaagtggatcgccagggcaaatt
ggtgatcaggggccacctgggcctcccggcaccaaaggcgaacgaggagagagaggtgac
atgcagtctcaggccgctgtccgtgccatagcacgacaagtttgtgaacagctaattcag
agtcacttgtctcgctacaactctattttgaaccagattcccagtcagtctgtttcagta
cgaacagtaccaggtccaccgggtgagcctggtcggtcaggacctccggggccacaggga
gagcagggtcctgctggcagaccaggattccctggagccagtgggcaaaatggccgccca
ggagagagaggtctcccaggagaaagaggagagaagggcagtccagggatagggacacaa
ggtcctcgtggtcctccagggcctccagggtctcctggagaaggtcggacaggaagtcag
ggccctccagggagacctggaattcaaggcacctcaggacgtccaggtatccctggtagc
cctggtcctgcaggatcccccggctactgcgaccagaactcctgcctcagatacaacgtt
ggagatggcaaccgatctaattcccccatgttcccatag
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integrated database retrieval system
