Sinocyclocheilus grahami (golden-line barbel): 107581862
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Entry
107581862 CDS
T04918
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
107581862 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107581862 (rag1)
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107581862 (rag1)
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107581862 (rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_10
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
U-box
Zn_ribbon_6
zf-rbx1
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
107581862
NCBI-ProteinID:
XP_016123020
UniProt:
A0A672PM48
LinkDB
All DBs
Position
Unknown
AA seq
1063 aa
AA seq
DB search
MEKGRWSSEDAPRASMPDELSHPKFSEWKFKLFRVRSMEKAPLPNETPVEKENQPEVAME
VAGSPGSVMKLCFGGKSKENMESARGRVDLKLQEIDTHMNLLKCLCRLCGLSIRKAKGPS
HEVQGDLEESSRCALRRMGCKFLTWPEVILKVFKVDVTTDMETVHPSLFCQRCWTAAMRG
GGFCSFTRTQIPDWKPHTSNCDLCFPKKSSFQRIGRKRAKPLKSAHSLPKRIKRDSSEFS
GANRVWRKTTENTAGSGGKEWLKLSVQRGQWAKNITQCQRNHLSTKLIPTEVPADFIRAV
TCQVCDHLLSDPVQSPCRHLFCRVCILRYSRALGPNCPTCNQHLNPSHLTRPAKFFLATL
NSLPLLCPREGCSDWVRLDSFREHCLNHYHEKESQEEQTPSDQNIDGYLSVNKGGRPRQH
LLSLTRRAQKHRLRDLKNQVKVFAEKEEGGDVKSVCLTLFILALRAGNEHKQADELEAMM
QGRGFGLHPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRNAEKELLPGFH
QFEWQPALKNVSSSWDVGIIDGLSGWTTSVDDVPADTISRRFRYDVALVSALKDLEEDII
EGLRERELDDSICTSGFTVVVKESCDGMGDVNEKHGSGPAVPEKVVRFSITIMSISIRVE
GEDDGITIFQEQKPNSELSCRPLCLMFVDESDHETLTAILGPVVAERKAMTESRLILSVG
GLLRSFRFFFRGTGYDEKMVRELEGLEASGSTYICTLCDSTRAEASQNMVLHSITRNHDE
NLERYEIWRTNPFSESADELRDRVKGVSAKPFMETQPTLDALHCDIGNATEFYKIFQDEI
GEVYQKSNPSREERRRWRSTLDKQLRKKLKLKPVMRMNGNYARRLMTREAVEVVCELVPS
EERREALRKLMDLYLQMKPVWRSTCPSRDCPDQLCQYSYNSQQFADLLSTTFKYRYDGKI
TNYLHKTLAHVPEIVERDGSIGAWASEGNESGNKLFRRFRKMNARQSKMFELEDILKHHW
LYTSKYLQKFMEAHKNSAKAMQATFNPEEIPDEVDMPLEVPDF
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagggaggtggagttctgaagatgctcccagagcctccatgcctgacgaactg
tcacatcctaagttttcggaatggaagtttaagctctttcgggtcaggtccatggagaag
gcccctctgcctaatgaaacaccggtggagaaggaaaaccagcctgaggtagcaatggag
gtggcaggctctccaggcagtgttatgaagctctgttttggagggaagagtaaggaaaac
atggagagtgctcgagggagagtggaccttaagctgcaggaaattgatacacatatgaat
cttctcaaatgcctgtgtcgcctttgtggcctttcaatacggaaggctaaaggtccttcg
catgaagtccagggagacttggaagagtccagtcggtgtgccttgcgtaggatgggctgc
aagtttctgacctggccggaagtgatcttgaaggtcttcaaggtggatgtgacaaccgac
atggagacggtgcatccatctttgttttgtcaaagatgctggactgctgccatgagggga
ggaggtttctgttctttcactaggacccagatcccagactggaagccccacacctccaac
tgcgacctctgcttccctaaaaagagctcttttcagcgaataggaaggaagcgggctaaa
ccacttaaaagtgcacacagccttccaaagagaatcaaaagggactcctcagaattctca
ggggccaatagagtgtggagaaagaccacagagaatactgcgggatcaggtgggaaagaa
tggttaaaactatcagttcagagaggacagtgggcaaagaatatcacacaatgccagagg
aaccatctgagcactaagctcatccccactgaagtcccagcggacttcatacgtgctgtt
acttgccaagtatgtgatcatctgctttctgaccctgtccagtcgccgtgtagacacctg
ttctgtcgggtctgcatcctaagatacagtcgtgctttgggcccaaactgtcccacctgt
aaccaacatctaaatccatcccacctgaccaggccagccaaattcttccttgccaccctc
aactcactccctctgctctgccccagagaaggatgcagcgactgggtccgattggactcc
tttagggaacactgcctcaaccactaccatgaaaaagagtctcaagaagaacaaacacct
tcagaccagaatatcgatggttacttgtcggtcaacaaaggtgggcgtcctcgacagcac
cttttgtcactgacccgtcgggctcaaaagcacaggctgagagacttgaagaaccaggtg
aaggtttttgctgaaaaggaagaaggaggggatgtgaagtcagtctgtttgacgctcttc
attctggcgttgagagctgggaatgaacacaaacaagcagatgaactggaagctatgatg
caaggcaggggatttggtctgcatcctgcagtgtgtttggctataagggtaaacaccttc
ctcagctgcagtcagtaccacaagatgtaccgcactgtaaaggccactagtggtcgccag
atattccagcccctgcacactctacgtaatgctgagaaagagcttcttcctgggttccac
cagtttgagtggcagccagctttaaaaaatgtttccagctcctgggatgtgggcatcatt
gatggcctctctggttggacaacctctgttgacgatgtccctgcggacactatctccaga
agattccgttacgatgtggcactggtttctgcattaaaagatttggaggaggacataatt
gaaggactgagagagagggagctggatgacagcatatgcacctccggttttaccgttgtg
gtgaaagaatcatgtgatggtatgggagatgtcaacgagaagcatggatctggtccagcg
gttcctgagaaggtagtgaggttttccatcacaatcatgtccatctccatccgagttgag
ggtgaagatgatggcatcaccatctttcaggaacaaaagccaaactctgagctctcctgc
agacctttgtgcctcatgtttgtggatgagtccgaccatgagaccctgacggccatcttg
ggacctgtggtagcagagcggaaagccatgacggaaagtcgtcttattttatcggttggt
ggtctgctacgatcctttaggttcttcttccggggcacaggctatgatgagaagatggtt
cgtgaattggaaggcctagaagcatcaggctccacttatatatgcacactctgcgactca
acccgagctgaagcgtctcagaacatggtgctacattccatcacacgtaatcacgatgaa
aatcttgagcgctacgagatctggaggacaaatcctttctcagagtctgctgatgagctc
cgtgaccgggtcaaaggcgtttctgccaagcctttcatggagacccagcctactctagat
gccctgcactgcgacattggcaatgctactgaattctacaagatctttcaggatgagatt
ggcgaagtctaccagaagagcaatccgagccgagaggaacgccgtcgttggcggtcaacc
ctggacaaacagctaagaaagaagctgaaactcaagcctgtgatgaggatgaatggaaac
tatgctcgtcggctgatgacacgtgaagctgtggaggtggtctgtgagctggttccttct
gaggaacggcgtgaggcactacgaaaactgatggacctctacctccagatgaagcctgtg
tggcgttccacctgtccctcccgagactgccctgaccaactctgtcaatacagctacaac
tctcagcaatttgctgatctgctttccaccacatttaagtaccgctatgatggaaaaatc
accaactacctccacaagactctggcccatgttcctgagattgttgagagagacgggtct
attggagcatgggccagtgaaggcaatgagtctgggaacaagctgttcagacgttttcgg
aagatgaatgcaaggcagtccaaaatgtttgaacttgaagatatacttaaacaccactgg
ctgtacacctccaagtatcttcagaagtttatggaggctcacaagaattcagcaaaagca
atgcaggccacattcaacccagaagagatcccagatgaagttgacatgcctcttgaagtc
ccagatttttga
DBGET
integrated database retrieval system
