Sinocyclocheilus grahami (golden-line barbel): 107581937
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Entry
107581937 CDS
T04918
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107581937
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107581937
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
107581937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
107581937
NCBI-ProteinID:
XP_016123152
UniProt:
A0A672JWV8
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MGCNLCTLQKREEHYKLLYEIAQVNGRDFSKSGHEGTVEAMRKDPIVVQVLRRGPSARNQ
NSLQEVCVVDVCTQTDITFEHIMALAKMRPTTPPVPDICPFLLSDSCHSIQTMEHDYFDC
PEYVASTQAEVDRAVEFECEEVELCRMNSQEKLGLTLCYRTDDEEDIGIFVGQVELNSIA
ARDGRIREGDRILQINGHDVQNREEAVALLSNENSRSIVLLVTRPEGQMDGSWLDEDHQD
FLEELKMEILEEQKKEGILQTAGCVKRSKIYEDASASTDTATCSSTILEKDSGVKCSFED
SSEHELLSHPQTRTQKQLRDRWEVGSHLVPMDTICLTRQEKGQEGRLSENGVDCDHFQQL
LELKCQIRNGGECGLVYRRSSTIECSLTEQGGSGVARELHMLNEELRSIERECQSIMQAH
QLRRSKHDSPRTDKESRLRRGKLADINEHPERLQSEKLRDKDSSSAYNTAESSRSTPLGT
ECSPDHSLQRRVHLTNQRNLRSTQQLQSPYSSPILSLPSQSSPICSRAHTYTSSTPPLQT
PITSPGSQGPSQAFSSSLEQSPSNPSESDPALPADDERCEKERNRNRVATARPYHSPYHS
NTTTQPPSTRHYQSYLQLLQQHSSSSLEYSQSQLSLLSLRGRPGPTPPGRLEWKVKVRAD
GTRYVARRPTRDRILRERALRIREERSGGMTTDDDAVSELKMGRYWSKEERKQQLARARE
QRRRREFMQRSRLECLRETMGTASGEVSILELSHKKMLKKRNKKILDNWMTIQELMSHGA
RAPEGTKVHNAFLSVTTV
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgggctgtaacttgtgcacgctgcagaaaagagaggagcactacaagctgctgtatgag
atcgcacaggtgaatgggcgtgatttttcaaagtctggacatgagggaacggtggaggcc
atgcggaaggatcccattgtggtgcaggtgttgaggcgggggccctcggcccggaaccag
aacagcctacaggaagtgtgtgtggtggatgtgtgcactcagacagacatcacctttgag
cacatcatggctctggctaagatgagacccaccaccccaccagtgccagacatctgcccc
ttcctgctgtcggacagttgtcattccattcagactatggagcatgactattttgattgt
ccagaatatgtggccagcactcaggcagaggtggacagggcagttgaattcgagtgtgag
gaggtggaactctgtcgaatgaacagccaggaaaagctgggtcttactctctgttaccgc
actgatgatgaggaagatataggcatttttgttggtcaggtcgagctcaacagcatagct
gcgagggatggacgcatcagagagggagacagaattttacagataaatggtcatgacgtg
cagaacagggaagaggctgtcgctctcctctcaaatgaaaattccagatctatagtgtta
cttgtcaccagacctgaaggacagatggatggaagctggcttgatgaggaccatcaagat
ttcctagaggagctgaagatggagattttagaagaacagaaaaaagagggaattcttcaa
acagcaggttgtgtaaagcggtctaaaatatatgaggatgcctcagcaagtactgataca
gcaacatgttcctctaccattctggagaaggacagtggcgtaaaatgcagctttgaggac
agctctgaacatgaattgctctctcatccccaaacacggactcaaaaacaacttcgggac
aggtgggaagtgggctcgcatttggttcctatggacaccatttgcttaaccaggcaggag
aagggtcaggagggcaggttgagcgagaatggggtagattgtgaccattttcagcaactc
ctggagctcaagtgccagatccgtaatggtggagaatgtgggttggtctacaggcgaagc
agtactattgagtgcagcctgacggagcagggcggaagcggggtggcacgggagctgcac
atgctcaacgaagagctgcgcagcattgaacgtgagtgccagagcatcatgcaagcccac
cagctgcgcaggagcaagcacgactctcctcgaacggataaagaaagtcgactgcgtcgt
ggcaagcttgcggatattaacgagcatcctgagagactacaaagtgaaaagctcagagat
aaagacagctctagtgcctacaatacagctgaaagttcccgttcaactccactgggaaca
gaatgttcaccagatcactctctacagcgtcgagtccatctgaccaatcaaaggaacctt
cggagtacccaacaactgcagagtccctacagtagtcccatcttgtcattacccagccaa
agtagccctatttgcagtcgtgcccatacatacaccagctccacaccacccttacagacc
cccattaccagtcctggttcacaaggacccagtcaggccttctccagcagcttggagcaa
agccccagtaacccttcggagtcagacccagcacttccagctgatgatgagcgctgtgag
aaagaaagaaaccggaatagggttgcaactgctcggccttaccattcaccctaccacagc
aacaccacaacccagcctcccagcacacgacactaccagagttacctacagctcctacaa
cagcattcctcttcctctcttgagtactcccagagccagcttagcctcctcagcctccgt
ggacggcctggtcccacgccacctggccgacttgaatggaaggtcaaagtgcgagcagat
ggaaccaggtatgtggcacgtcggcccacacgagaccgcatcctgcgcgaacgagcctta
cgaatccgggaggaacgcagcggtgggatgactacagatgacgatgcagtcagcgagttg
aaaatgggtcggtactggagtaaagaagaacgcaagcagcagctagcacgggctagagaa
cagcggcgcaggagggagttcatgcagaggagccggcttgagtgcctcagggagaccatg
gggacggcaagtggagaggtcagcatcctggagctcagtcataagaagatgctgaagaaa
cgaaacaagaagatccttgacaactggatgaccattcaagagctcatgagccatggagca
cgagcacccgagggcaccaaagttcacaatgccttcctttctgtcaccacagtttag
DBGET
integrated database retrieval system
