KEGG   Sinocyclocheilus grahami (golden-line barbel): 107582010
Entry
107582010         CDS       T04918                                 
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
  KO
K11864  BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03440  Homologous recombination
sgh04621  NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    107582010
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    107582010
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:sgh01002]
    107582010
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sgh04121]
    107582010
   03036 Chromosome and associated proteins [BR:sgh03036]
    107582010
   03400 DNA repair and recombination proteins [BR:sgh03400]
    107582010
Peptidases and inhibitors [BR:sgh01002]
 Metallo peptidases
  Family M67
   107582010
Ubiquitin system [BR:sgh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    107582010
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    107582010
   BRISC complex
    107582010
Chromosome and associated proteins [BR:sgh03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    BRISC complex
     107582010
DNA repair and recombination proteins [BR:sgh03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-A complex
     107582010
SSDB
Motif
Pfam: BRCC36_C JAB Prok-JAB UPF0172 REP_ORF2-G2P DUF6262 DUF7385
Other DBs
NCBI-GeneID: 107582010
NCBI-ProteinID: XP_016123187
LinkDB
Position
Unknown
AA seq 260 aa
MAVSAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRV
EISPEQLSAASTEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFV
GLIFSCFIEDKNTKTGRVLYTCFQSVQAQKGSEYERIEIPIHVVPHEAIGKVCLESAVEL
PRILCQEEQDTYRRIHSLTHLDPITKIHNGSVFTKTLCSQMSAISGPLLQWLEDRLEQNK
QSIIKLQKEKEQLTQELASL
NT seq 783 nt   +upstreamnt  +downstreamnt
atggcagtgagcgctgtacatttagagtcagacgcatttctagtctgtatgaatcacgct
ctgagcacggagaaagaggaagtaatggggctctgcatcggcgaggtggacacaaaccgc
atcgtgcacattcattctgtcataattctgcgtcgatcagacaagaggaaagaccgagtg
gagatttcaccagagcagctgtcagcagcgtccaccgaagcggagaggttggctgagatg
acgggacgtcccatgagggttgtgggctggtaccactctcatccacacatcaccgtgtgg
ccatcgcatgttgatgttaggactcaagcaatgtatcagatgatggatcagggttttgtt
ggactcatcttctcatgctttatagaagataaaaacacaaagactggtagagtcctgtac
acctgtttccagtcagtacaagcccagaaaggctcagagtatgagcggattgagatcccc
atccatgtagtcccacatgaagccatcgggaaagtatgtctggagtctgccgtggaacta
cccagaatcctctgtcaagaagaacaggatacatacagaaggattcacagtttaactcac
ctggatccaatcacaaagatacataatggatcagtgttcactaaaaccctgtgcagtcag
atgtcggccattagcggcccgctgctgcagtggctggaagaccgactggaacagaacaaa
caaagtatcatcaaactccagaaagagaaagagcaactgacacaagaactggcttcatta
taa

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