Sinocyclocheilus grahami (golden-line barbel): 107582269
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Entry
107582269 CDS
T04918
Name
(RefSeq) LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107582269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgh03041
]
107582269
Enzymes [BR:
sgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107582269
Spliceosome [BR:
sgh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
107582269
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
Motif
Other DBs
NCBI-GeneID:
107582269
NCBI-ProteinID:
XP_016123524
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MVMVGYSICFEDCTSEHTILKYMTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILF
GLIKDVARFRPDLKVLVASATLDTELFSCFFDDAPVFRIPGRRFPVDIYYTKAPEADCLE
ACVVSVLQIHVTQPAGDVLVFLTGQEEIEACCELLQERCRRLGSKISEFVVLPIYANLPS
DMQAKIFNPTPPGAAKTKQTDAKSYVVVATNIAETSLTINGIIYVIDPGFCKQKSYNART
GMESLIVTPCSPCSEEILTIAAMLSVNNSIFYRPKDKVVHADNARMNFVVPGGDHIVLLN
VYTQWVESGYSTQWCSENFIQFRSMKTLMDRIEVELCSCNGESVPIHKAVTAGYFYNTAC
LSKGGYKTVKHQQTVYIHPXSSLFEEQPRWMIYHELVFTTKVFMRQVIEIESGWLLEVAP
HYYKNKELEDGSSKKMPRKQGKAREELG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggtcatggtgggctacagcatctgttttgaggactgtacgtcagaacacaccatcctg
aagtacatgactgatggcatgttactcagagagtttcttacagagcccgacctcgccagc
tacagtgtgatcatcatcgatgaggcccacgagcgaacgttacacacagacatcctcttc
ggtctaatcaaagacgttgcacgtttccgccctgacctgaaggttctggtggccagcgcc
actctggacacagagctcttctcttgcttctttgacgatgcacccgtatttaggattcca
ggtcgtaggtttcctgtggatatttactacacaaaggctccggaggctgactgcctagaa
gcatgtgttgtgtcagtgctacagatccatgtcactcagccggctggagacgtactggtc
ttcctcactggacaggaggagattgaggcgtgctgtgaacttctacaggagagatgtagg
agactgggctcgaagatatctgaatttgttgttctgcccatctatgccaacttgccctcg
gacatgcaggccaagatcttcaatcccactccgcctggagccgcaaaaaccaaacaaact
gatgctaaatcttatgttgtggtggccacaaatatcgcagagacgtctctcacaatcaat
ggcatcatctatgtgattgatccaggtttctgcaaacaaaagagctacaatgcaaggaca
ggaatggaatctctcattgtcactccctgttcaccatgctctgaggagattctgaccatc
gcggccatgctgtcagtgaacaactccatcttctaccggcccaaggacaaagtggttcat
gccgacaacgctcgaatgaactttgtggtaccaggaggagatcacattgtgctgctcaat
gtatatacacagtgggtagagagtggttactccactcagtggtgctccgagaacttcatc
cagtttcgctccatgaagacgttgatggacaggatcgaggtggaactgtgcagctgcaac
ggtgaaagtgtgcccattcacaaggcggtgactgcaggatatttctacaacacggcatgc
ttgagcaaagggggttataaaacagtcaaacaccagcagactgtttacatccatccanac
agctcactctttgaggaacagccacgttggatgatctaccacgagctggtcttcaccacc
aaagtgttcatgagacaggtgatagagattgaaagtggctggctgctggaagtggctcct
cattattataagaacaaagaactggaggacggcagcagtaagaagatgccccgcaaacaa
ggcaaagcccgtgaagagctgggctga
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