Sinocyclocheilus grahami (golden-line barbel): 107582366
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Entry
107582366 CDS
T04918
Name
(RefSeq) uncharacterized protein LOC107582366
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
107582366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107582366
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107582366
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
107582366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
zf-RING_UBOX
zf-C3HC4_4
SPRY
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
ANCHR-like_BBOX
U-box
GlutR_dimer
DUF948
Motif
Other DBs
NCBI-GeneID:
107582366
NCBI-ProteinID:
XP_016123650
LinkDB
All DBs
Position
Unknown
AA seq
861 aa
AA seq
DB search
MSAHLWTEEQFNCPVCLDLPSDPVTIPCGHSYCKACITDYWDNEGRKNGTYSCPECRQTF
NPRPTLCRNTMLAEAVEQLRRGALSSAGRESIKSARSAASSASESAHTRSKGASKKLPGS
AVPCDCCPEPRAAVKTCLVCMASFCETHLKPHNTQEKLKNHELIAPTGDLTQKICPEHKY
LQEFFCRSCQMYVCWLCTSNQHKGHESVSTQAERNEKQKELGAVLSENHQRLQDRERELK
DMKKVLDTLTRSSGTVRDEADVVLSELQESVQRMLELLQDVMVSTAQEKLNEAQEVVTKL
EAEVKQLKRKDGELKELINCQDSIYFLKTYQSLCCPLEGGELGAVTVNPEATFDPVRSVV
VQLREKVEEMCDQELDKVNKTVYNTTAFTVADRNGQKTGGIMKLFSGKGARATRAQGPPP
LPSVSTRGTVNTRTQAVRNSEPRVNRGVTNAPRQARSPRKERDDTDRSRSSLRPRETQKR
EERENDADTWSFSSVRSRGRPRGEDGDQERENQASQRRQSTQSRNTRDEEQVDRWSLSSV
RPRLRREDREQVNGEAQSSPSQQRSNAVDRQQPARQSDRWSLSSLLPRNRKKRQDTVKEA
TPTLQEAGSVRPRSLSRASAWGEPTEVNPGLFLDSPTDSPVVNPAFPTLREINIESIQAP
EPRVRDEFLQYACDLTLDPNTAHRRLVLSDGDTVATLQQTSQPFPDLPQRFDGWTQVLCL
QPLSSDRCYWEVEWRGRGSSLGVVSGSISRKGADTGAGLGYNSQSWSLELSDMCCAAMHA
NKKVEIPVTYSPRVGVFLDRTAGTLTFYSVDDELVPLHAFQGSFPPQLYAAFGVGCGVGV
GLDFAMGQFSSTSDSIKICPL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctcatctatggactgaggagcagtttaactgccccgtctgtctggatctgccc
tctgaccccgtgaccatcccatgtgggcacagttactgcaaggcctgcatcacagattac
tgggacaatgaaggcaggaaaaacggcacctacagctgcccagaatgccggcagaccttc
aaccctcgtcccactctctgccggaacaccatgctggccgaagctgtggagcagctccgc
cgaggggccctcagctccgctgggcgagagtccatcaagagcgcccggagcgcagcgtcc
tctgcgtctgagagtgcgcacacacggagcaaaggggcatcgaaaaagctgccaggttcg
gcagtgccctgtgactgctgcccagagcccagagcggcagtgaagacgtgtttggtgtgt
atggcatcattctgcgagactcacctgaagcctcataacacgcaggagaagctgaagaac
cacgagctgatcgcacccaccggtgacctgactcagaagatctgccccgagcacaagtac
ctgcaggagttcttctgccgctcgtgtcagatgtacgtgtgctggctgtgcaccagtaac
cagcacaagggccacgagagcgtctccacacaggctgagagaaacgagaagcagaaagag
ctgggcgcagttctgtctgagaaccatcagcgactccaggacagagagagagaactgaaa
gacatgaagaaagtcttagacacactcacgaggtcctcaggaacagtgcgggacgaggcg
gacgtggtcctgtcggagctccaggagtcagtgcagcggatgctggagctactccaggac
gtgatggtctccactgcgcaggagaaactcaacgaggcccaggaagtggtgaccaaactg
gaggccgaagtcaaacagcttaagagaaaagacggagaactgaaagagctcatcaactgc
caggacagtatctacttcctgaagacgtatcagtctctgtgctgcccgctggaaggagga
gagctgggagctgtaaccgtgaaccctgaagccacgtttgatcctgtcaggagcgtcgtc
gtccagctgagggagaaagtggaggagatgtgtgaccaggagctggacaaggtcaacaag
acagtgtacaacaccacagcgttcacagttgcagaccgcaacggacagaaaacaggaggc
ataatgaaactgttttctggaaaaggagccagagccactcgtgcacaaggacccccacca
ctaccttcagtaagcacacgaggaacagtgaacacgcgcacacaagctgtcagaaacagt
gagccaagagttaacagaggtgttacaaacgccccaagacaagccagatccccgagaaag
gagagagatgacactgacaggagtcgcagttcattgagaccaagagaaacacaaaagaga
gaggaaagagaaaacgatgcagacacctggagtttcagttcagtgagatcaagagggaga
ccgagaggagaagacggagatcaggaaagagaaaatcaggcctctcaaaggcgtcaaagc
acacagagcagaaacacacgggatgaagaacaagtggaccgctggagtttgagttcagtc
agaccgagactgaggagagaggacagagaacaagtcaatggagaagcccagtctagtccc
tctcagcagagatcaaacgctgtggacagacagcagccggccagacaatcggacagatgg
agtctgagctctctcttacctagaaacaggaagaagagacaggacacagtgaaagaggcc
acacccactctccaggaggcggggtcagtgagacctcgtagcctctcccgtgccagtgcc
tggggagagccaacagaagtgaatcctgggctgttcctggactcacctactgacagtcca
gtcgtcaatcctgcttttcccacattgcgagaaattaacattgagagtattcaggcccca
gagcccagagtcagagacgagttcctgcaatatgcttgtgatttgaccctggatccaaac
acggcccatcggcgtctggtcttgtctgatggagacactgtggccacccttcagcagacg
tctcagccgttccctgacctccctcagcgcttcgacggctggacacaggtgctctgtctc
cagcccctctcctccgaccgctgctactgggaggtggagtggagggggcgtggctcctct
ctgggtgtggtcagtggttccatttcccgcaaaggggcggatacgggggcagggcttggg
tataacagccaatcgtggagcttggagctgtcagacatgtgctgcgcagccatgcacgcc
aataagaaggtggagatccctgtgacctacagccctcgagtcggggtgtttctggacagg
accgcagggactctgactttctatagcgtggatgacgagttggttcctctccatgctttt
caagggtcattcccaccacagctgtacgctgcgttcggggtgggctgtggggtcggcgtg
gggctggattttgccatggggcagttcagctccacgtcagacagcattaaaatctgtccc
ttgtga
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integrated database retrieval system
