Sinocyclocheilus grahami (golden-line barbel): 107582435
Help
Entry
107582435 CDS
T04918
Name
(RefSeq) transcription factor SOX-13-like
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107582435
Transcription factors [BR:
sgh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107582435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
107582435
NCBI-ProteinID:
XP_016123767
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MSYGSTSEQQRRRRGVYRLEKSAPPNARSPLESSPSKESIRSYISASQDGGSRAHDKTDR
KPNVSEVMPTIEKLLNTDWKEKFFGKGLQGSVNLKGTPESLAEKELQLLLMINQLSGLRE
QLLGAHSEQRNMAALLLEKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNM
PYVMIPAFHPNAQPLPVTSEAQMGLPRHPIPCKPVEYPLPLLPNPHSTPVKRSSGTVFRQ
DSSQPLNLTAKPKTPSPQALEMAHLQVGYRARDLPHSPTRSALSLSFLGEGDVVTQAIHD
AQQLLRGGQGPMGRERDNNTRLEASRERMDDGQSLRMNEDHHSSDTEGQMAVSGVGSFGE
SRTPSSGHIKRPMNAFMVWAKDERRRILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYE
EQARLSRQHLERYPDYKYKPRPKRTCIVEGRRLRVGEYKAMMKSRRQEQRVTYPPSQSEQ
QLPYPTSEGQYQTTPVSMAPLALHPALLEHYLPRGLEPMKGQGSEMRDVTRPRQPYSEGE
ESDAGERSEGELVVLTD
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatggctctacatccgaacaacagcgaaggaggagaggtgtttatagacttgag
aagtcagcgccccctaatgcacgatctcctttggagagttctcccagtaaagaatcaata
cgatcatacatatctgccagtcaagatggaggcagcagagctcatgataagactgacagg
aagcctaatgtcagtgaggtgatgcccactattgaaaagcttctgaatacagactggaaa
gaaaagttcttcgggaagggtcttcagggcagtgtcaacctaaaaggaaccccagagagt
ctggcagagaaggagcttcagttgttgttgatgataaaccagctctctggtctgcgggag
cagctgctaggagctcattctgagcagaggaacatggccgctctgctgctggagaaacag
cagcaacagatggaactggcaaggcagcagcaagaacagatcgccaaacagcagcagcag
ttgatacagcagcaacataaaatcaacttactgcagcagcaaattcagcaggtgaacatg
ccttatgttatgatccctgcctttcatcccaatgcccaaccgttgcccgtcacctctgag
gcccaaatgggattgcctcggcatcccattccctgcaaaccagtggaatatcccttgccg
ttgctgcccaatccacactccactccagtcaaaaggtccagtggtacagtctttcgccag
gattccagtcaacctctcaacctcacggctaaacctaagaccccaagtcctcaggcactg
gaaatggcccacttgcaagtagggtaccgagccagagatctaccccatagtcctactcga
tctgccctcagcctgagcttcttgggagagggtgatgttgtgacacaagccattcatgat
gcccagcagctgttgcgtggaggacaaggcccgatgggccgtgagagggacaacaacaca
aggctggaggcgtctcgagagcggatggatgatggacagtccctgcggatgaatgaggac
caccacagcagtgacactgaggggcagatggcagtctctggtgtgggtagctttggtgaa
tcccggactccctcctctggccacatcaaacgtcccatgaacgccttcatggtgtgggcc
aaagacgaaagacggcgtatcctgcaggcgttccctgacatgcacaactccagtatcagc
aagatcctcggttcccgatggaagtccatgtccaatcaggagaagcagccgtactacgaa
gagcaggccagattgagtcggcagcacctggaacgttacccagactacaaatacaaaccc
cggccgaagcggacctgtatcgtagagggcagacgactgcgggtcggagagtacaaggcc
atgatgaagagtcggcgacaggagcaacgagtaacttaccctccaagccaatcagagcag
cagctaccgtaccctaccagtgaaggacagtaccagaccacgccggtgtcaatggcccca
ttggccttgcaccctgccctcctggagcactaccttcctcggggtctggagcccatgaaa
ggccaagggagtgagatgcgggatgtcacgcggcccagacagccctacagcgaaggggag
gagagtgatgcgggtgaacgcagtgagggagagctggttgtcctcactgactga
DBGET
integrated database retrieval system
