Sinocyclocheilus grahami (golden-line barbel): 107582784
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Entry
107582784 CDS
T04918
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107582784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgh03400
]
107582784
DNA repair and recombination proteins [BR:
sgh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107582784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
T3SS_needle_reg
AAA_27
Motif
Other DBs
NCBI-GeneID:
107582784
NCBI-ProteinID:
XP_016124279
UniProt:
A0A672RFR5
LinkDB
All DBs
Position
Unknown
AA seq
936 aa
AA seq
DB search
MAVQPKQNLSMDSASEHGFLNFYFSMPEKPDTTVRVFDRNDYYTVHGKDAAFAAKEVFKT
NGVIKNLGTGNKRLESVVLSKMNFESFVRDLLLVRQYRVEVYKNVSKSSKEHDWQISFKA
SPGNLTQFEEILFSSGGGPGEGAAGVVGVRLGTGADGQRVVGVGYVDGTLRKLGVCEFPD
NDQFSNLEALLVQIGPKECVLPGGDAGGDLGKLKQVVQRGGILLTDRKKSEFTTKDIVQD
LNRLLKARKGETVSSAALPEMEKQIAMSCLQAVIKYLELLSDEANFGSFKITTFDLNQYM
RLDNAAVQALNLFQGSSDDATGTHSLAGLLNKCRTPQGQRLVSQWIKQPLIDKNKIEERL
DLVETFVEDSELRKSCQEDLLRRFPDLNRMAKKFQRQSSNLQDCYKVYQAVGHLPNLVLA
LERYSGKHQVLLHAAFISPLNDLVSDFSKFQEMIETTLDMNQVEHHEFLVKPSFDPTLSE
LRENMNRLEKAMQAALNSAARELGLEAAKTVKLESNAQIGYFFRVTCKEEKSLRNNKKFT
TLDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEIISIAAGYVDPVQTLNEVIA
QLDAVVSFAVVSHAAPVPYIRPKILEKGSGKLVIKAARHPCVEAQDDVAFIPNDVTFARG
EEMFHIITGPNMGGKSTYIRQVGVIVLMAQIGCFVPCDEAELSVVDCVLARVGAGDSQIK
GVSTFMAEMLETAAILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEYIATRLKSFCLF
ATHFHELTALAQQVPTVRNLHVTALTTDSTLTMLYKVKKGVCDQSFGIHVAELANFPKHV
IANAREKALELEEFQDISRAGEEAGPEAKKRCLEKQEGEKIIEAFLAKVKSMPAESMSDE
AVKEELRKLKAEVIGQNNSFVNEMVSRSAKVKLTSA
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaacctaaacaaaatctgtccatggacagtgcatctgaacatgggtttctg
aatttttatttttctatgcccgagaaaccagacaccaccgtgagagtatttgatcgaaac
gattattatacggtgcacggaaaagatgcggcctttgcagccaaggaggttttcaagacg
aatggagtcatcaaaaacctgggcacaggaaataagaggttggagagtgtggttctcagt
aagatgaactttgagtcatttgtgagggacctgctgctggtcaggcagtaccgggtggag
gtttacaagaatgtcagtaagagtagcaaagaacatgactggcaaatatctttcaaggcc
tctccaggaaatctgacccagtttgaggagattttatttagcagtggaggagggcctggg
gagggagctgctggtgttgtcggggttcgtcttggcaccggggccgatggacagcgtgtt
gtcggtgttggctatgtggacggcaccctcaggaaactcggtgtgtgtgaattcccagac
aacgatcagttttccaatctggaggctcttcttgtgcagatcgggcccaaagagtgtgtg
cttcctggaggagatgcaggtggagaccttgggaaactcaaacaggtggtacagcgtggt
ggcattctgctcacagacaggaagaaatcagagttcacaaccaaagacattgtgcaggat
ctgaatcgtctactgaaggcccgtaagggagagaccgtgtccagtgctgcacttccagag
atggagaaacagattgcaatgtcttgcttacaagcagtcatcaaatacctggagctcctc
tcagatgaggccaattttggttccttcaagataaccacctttgatctcaaccagtacatg
cgtctggataatgctgctgtgcaggccctgaatctcttccagggttcctctgatgatgct
acaggcacacactccctggcaggcctcttaaacaaatgtcgtaccccacaaggacagcgg
ttggtcagccagtggatcaaacagcctctcatcgacaaaaacaagatagaagaaagactg
gatcttgtggagacttttgtagaggactctgagctgaggaagagttgtcaggaggatctt
ctccgccgttttccagacctgaaccgaatggcaaagaagttccagcgtcaaagctctaat
ttacaagactgttacaaggtctatcaagctgtggggcatctgccgaatctggtgctggcg
ttggagagatacagtgggaaacatcaggtcctcctgcacgcagcattcatctctcccctc
aacgacctcgtctctgacttctccaaatttcaggagatgattgaaaccacactggacatg
aaccaggttgaacatcatgagttcctggtgaaaccctcatttgatcccacattgagtgag
ctcagggagaacatgaatcgtttggagaaagccatgcaggctgccttgaacagtgcggct
cgtgaactggggctggaagcagctaagactgtgaagcttgaatccaatgcacagattggt
tactttttccgagtcacatgcaaagaagaaaagagtctccgcaacaacaagaaattcact
actttagatgttcaaaagaatggagtgcgattcactaacagtaagctgagctctttgaat
gaagagtacactaaaagcagagaagagtatgaagaggctcagaatgccatcgtcaaagaa
atcatcagcatagccgctggctatgtggatccagtacagactctgaatgaggtgatagct
cagctggatgcagtggtgagctttgctgtggtgtcccatgctgccccagtgccttacata
aggcctaaaatactagagaaagggtcagggaaactagttataaaggcggcaagacatccc
tgtgttgaagcccaagatgatgtggctttcattcccaatgatgtcaccttcgcaaggggc
gaggagatgtttcatatcatcacaggtccaaatatgggtggtaaatctacatacatccgt
caagtgggtgtgatcgtgctgatggcacagattggttgttttgtaccatgtgatgaggca
gagctaagtgtggtggactgcgtgctcgctcgagtgggtgcgggggacagccagatcaaa
ggagtgtccacctttatggctgagatgctggagacggctgctattcttcgatcagccaca
gaggattctctcatcattattgatgaattgggcagaggcacatccacatacgatggcttt
ggtctggcctgggcaatctcggagtacatcgccacccgcctcaagtccttctgcctgttt
gccactcacttccatgagctgacggcacttgcacagcaggttcccactgtccgtaacctc
cacgtcactgccctgaccacagacagcactctcaccatgctctacaaggtgaaaaagggc
gtttgtgaccagagctttgggattcatgtggcagagcttgctaacttccccaagcatgtg
attgctaatgcacgggagaaggctttggagctagaggagttccaggatatctcaagagcc
ggggaggaagctggacccgaagccaagaaacgctgccttgagaaacaggagggggagaag
atcatcgaggctttcctggctaaggttaaatcaatgcctgctgaaagcatgtcggatgag
gctgtcaaagaggagctgcgcaaactcaaggcagaggtcatcggacaaaacaatagcttt
gttaatgagatggtgtcacgttctgccaaagtcaaactgacttcagcctaa
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