Sinocyclocheilus grahami (golden-line barbel): 107582788
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Entry
107582788 CDS
T04918
Name
(RefSeq) neurexin-1a isoform X1
KO
K07377
neurexin
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107582788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107582788
Membrane trafficking [BR:
sgh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
107582788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
107582788
NCBI-ProteinID:
XP_016124287
LinkDB
All DBs
Position
Unknown
AA seq
1504 aa
AA seq
DB search
MSFSMRNGAHLIWIGLLVCCLVDMGASMEFTGAEGQWARFPMWNACCESEMSFNMKTKSA
HGLLVYFDDEGFCDFLELLIHNGRLSLRFSIFCAEPATVLSDTAVNDSRWHAVTLRRNFK
NTMLVVDEEIKWVEVKSKRRDMTVFSHLFLGGLPPELRSVALRLTSSAIKDQVPYKGWIT
NLRVNSSEPPLIGSEGVNNDICEADHICLNGGVCSIVNDEPICDCSKTGFQGKDCSEEEA
YVGGLAHLMMGDQGKRKEREEYVATFKGSEYFCYDLSPNPIQSSSDEITLSFKTLQRNGL
MLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHS
GIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNN
FMGCLKEVVYKNNDVRLELSRLAKLGDPKMKVSGVVAFKCENVATLDPVTFETPESFITL
DKWSAKKAGSISFDFRTTEPNGLLLFSHGKPKPQQQKDPKSPKTLKVDFFAIEMLDGHLY
LLLDMGSGTTKTRAVNKKVNDGEWYHVDFQRDGRSGTISINSIRTPYNAPGESEILDLDD
ILYLGGLPEDRAGLIFPTEVWTALLNYGYVGCVRDLFMDGQSKDIRRIAEAQRAVGVKPS
CSKEPPKQCLSNPCLNSGTCREGWNRYVCDCSGTGYLGRSCERDATILSYDGSKFMKIQL
PVVMHTEAEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRINCTT
SKGPETIFAGQNLNDNEWHTVRVIRRGKSLKLMVDDLQPSEGQITGDHTQLEFHNVETGI
VTEKRYMPAVPSNFIGHLQGLSFNGMSYIDLCKNGDIDYCELNAMIGYRSIVADPVTFKS
RSSYVTLPTLQAYYSMHLFFQFKTTSPDGLIVYNRGDGNDFIVVELVKGYLHYVSDLGNG
AHLIKGNSNTPLNDNHWHNVMISRDTNNLHMVKIDTKITTQTTMGAKNLDLKGDLYVGGV
AKEMYKDLPKLVHSKEGFQGCLASVDLNGRLPDLLSDALSNAGQVERGCEGEENVALLKA
DLQGPSTTCQEDSCSNQGVCLQQWEGFSCDCSMTSFGGPLCNDPGTTYIFGRDGGLIVYT
WPPNDRPSTRADRLAVGFSTQQKDAVLVRVDSSSGLGDYLQLQIEKGNIKVVFNVGTDDI
NIEETSKFVNDGKYHIVRFTRSGGNATLQVDDLPVIERYPTGNIDNERLAIARQRIPYRL
GRVVDEWLLDKGRQLTIFNSQTTIKIGGWEKGSRPFQGQLSGLYYNGLKVLNMAAEGDPN
VRVEGSARLVGDMPSSSITPQSSASATGNRSETSPSITDITTTTASNRQGKQTTTPQDDL
LVASAECPSDDEDIDPCDPSSGGLAHPPLPEAKGYPSPEVIRESSSTTGMVVGIVAAAAL
CILILLYAMYKYRNRDEGSYHVDESRNYISNSATQPNGAAVKEKPIGVPKNKKDKKNKDK
EYYV
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgagcttctcaatgcggaacggcgcacatctaatctggataggcttactggtttgttgc
cttgtcgacatgggggccagtatggagttcaccggcgcagaaggccagtgggcacggttt
cctatgtggaacgcctgctgtgaaagcgaaatgagtttcaacatgaagaccaaaagcgct
catggacttttagtttactttgacgacgagggattctgtgacttcttggaactgctcatc
cacaacggtagactcagtttgcggttctccatcttctgcgccgagccggcgacggtgctg
tccgataccgccgtcaatgacagccgctggcacgccgtgaccttgcgcaggaatttcaaa
aacactatgttagttgtggacgaagagatcaagtgggtggaggttaagtcgaaaaggagg
gacatgacggtcttcagtcatttattcttaggagggttacctcctgaactgcgatctgta
gcattacgcctcacgtcttcagccatcaaagatcaggtcccctacaaaggatggataacc
aatctgagggtgaacagttccgagccgccgcttatcggtagcgagggagtcaacaacgac
atttgcgaagctgaccacatttgcctgaacggaggagtctgcagcatcgtcaacgacgag
cccatttgcgactgctccaaaacgggattccagggaaaagactgcagtgaagaagaggcc
tatgtaggaggtcttgcgcacctgatgatgggcgaccaagggaaaaggaaagagagagaa
gagtacgtggccaccttcaagggttcagagtatttctgttacgacctgtccccgaacccc
attcagagcagtagcgatgagattacgctgtccttcaagaccctgcagcgcaatggattg
atgctccacaccggaaaatctgcagactacgtcaacttggcgctgaagaatggtgccgtc
tcgctggtcatcaacctgggctctggggccttcgaggccctggtggagcccgtcaatgga
aaatttaatgacaatgcctggcatgatgtgaaggttaccaggaaccttcgtcagcactca
ggcattggacacgctatggtaaacaaactacattgttcggttacaatatctgtggatgga
attctgaccaccactggatatacacaagaggactacaccatgctaggctcggatgacttt
ttctatgtcgggggtagtcccagcactgccgatctgcccggatcccccgttagcaacaac
tttatgggctgtctgaaagaggttgtgtacaagaacaatgatgtaaggctcgagctgtct
cgactggccaagctaggcgaccccaaaatgaaggtgagcggtgtggtggccttcaaatgt
gagaacgtggctaccctagatcctgtcaccttcgagacgccagagtcattcattaccctt
gacaagtggtccgccaaaaaagccggttccatctccttcgacttccgcaccactgagccc
aacgggcttcttctcttcagccacggaaaacccaaaccgcagcagcagaaagaccccaag
agccccaaaaccttaaaggtggatttcttcgccattgagatgctggacggccacctgtac
cttctactcgacatgggctcgggcaccaccaaaacccgtgctgtcaacaaaaaagtcaac
gatggggaatggtaccatgtggacttccagagagatggaagatcaggcaccatttccatc
aactcgatccgtactccctacaacgctcccggtgagagtgagatcctggacttggacgac
atactctacttgggcggcctgccagaggaccgtgccggtctgatcttccctacggaggtc
tggactgcgctcctaaactacggatatgtgggctgtgtgcgagatctgttcatggacggc
cagagcaaggacatccggcgtatagcggaggcccagagagctgtcggggtgaagccatcc
tgctctaaggaacctcccaaacagtgtctaagcaacccctgcctgaacagcggcacctgc
agagagggctggaaccgatatgtatgtgactgctcagggacgggctatctgggacgctcc
tgtgagagagatgccaccatcctcagttatgatggcagtaagttcatgaagatccagttg
ccagtagtgatgcacacagaagcagaagacgtgtctttgcgcttccgttcccagcgtgcc
tatggtgttctcatggcaaccacctcccggaactcagcagacactctgagactggagctg
gacggagggcgtgtccgactcactgtcaatctagactgtatcaggataaactgtactacc
agtaaaggtccagagaccatatttgcgggccagaacttgaatgacaatgaatggcacaca
gttcgtgtcatcagaagaggcaaaagtctgaagctaatggtggatgacctgcagccctct
gaaggtcaaatcacgggagaccacacgcagctggagttccacaatgtggaaacgggcatc
gttaccgagaagcgttatatgcccgctgtgccctccaacttcattggacacctgcagggc
ttgtccttcaatggcatgtcctacattgacctgtgcaagaacggcgacatcgactactgc
gaattgaatgccatgattggctacaggagcatcgtggcagacccggtgaccttcaagtct
cgctctagctatgtgaccttgcccaccctccaggcctactactccatgcacctgttcttc
caatttaagaccacttcaccagatggactcatcgtgtacaaccgaggagatggcaatgac
ttcatagtagtagagctggttaaaggatatctccattatgtgtcagaccttggaaatgga
gctcatctcatcaaagggaattccaacacaccactgaatgacaatcactggcacaatgtg
atgatctcacgagatacaaacaacctccatatggtcaaaatagacaccaaaatcaccaca
cagactaccatgggagccaagaacctggatctgaaaggtgatttgtatgtcggaggtgtg
gccaaagagatgtataaggacttgccaaagctggtgcattctaaagagggcttccaaggc
tgcttggcttctgtagacctgaacggccgtttgccagacctgctttcagacgcactgtcc
aacgccggccaggtggagagaggatgcgaaggtgaggaaaatgttgcattgctgaaagct
gacttgcaaggtcccagcactacctgtcaagaggattcctgctccaatcagggcgtgtgt
ctgcagcagtgggaggggttcagttgcgactgcagcatgacatcatttggagggccgctc
tgcaatgacccgggaaccacatacatatttggacgtgatggagggctcattgtgtacaca
tggccgcccaacgacagaccgagcacacgagctgaccgactggcagtcggctttagcacc
cagcagaaggatgcagtgctggttagggtggacagctcttctggcctgggagactacctg
cagcttcagattgaaaaaggaaatatcaaagtggtgttcaatgtgggcaccgatgacata
aacattgaagaaacctctaagtttgtaaatgatggaaagtaccacatagttcgctttacg
agaagtggtggtaacgccaccttgcaggtggatgatctgccagtcattgagcgctaccca
acaggcaacattgataacgaacgcctggcgattgctagacagcgaatcccatatcggctt
ggtcgagtagttgacgaatggctactcgacaaaggtcggcagctcaccatcttcaacagt
cagaccaccataaagattggaggctgggagaagggcagccggcccttccagggccaactc
tcagggctttactacaatggcctaaaagtgctcaacatggctgccgagggcgaccccaac
gtacgtgtggagggtagtgcccggctggtgggagatatgccctcctcgtctattacgcct
cagtccagcgcctccgccacaggcaaccgctcagaaacgtcaccctccatcaccgacatc
accactacaaccgcatccaaccgccagggcaagcagacgacaactccacaggatgatctt
ctggtagcgtcggcagaatgtcccagcgacgatgaggacattgacccttgcgacccaagt
tcaggtgggttagctcaccctccactgcctgaggccaagggttaccccagcccggaagtg
attcgggagtccagcagcaccacgggcatggtcgtaggcatcgtcgcggcagccgccctt
tgcatcctaatcttactctacgccatgtacaaatacagaaatcgcgatgagggctcgtac
cacgtggatgagagccgtaactacattagtaattccgccacgcagcccaacggagccgcc
gtcaaagaaaagcccattggcgtgcccaaaaataaaaaagataaaaagaacaaggacaag
gagtactacgtctga
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