Sinocyclocheilus grahami (golden-line barbel): 107582970
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Entry
107582970 CDS
T04918
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A-like isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107582970
04020 Calcium signaling pathway
107582970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107582970
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107582970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
107582970
NCBI-ProteinID:
XP_016124481
LinkDB
All DBs
Position
Unknown
AA seq
1774 aa
AA seq
DB search
MSEMFIKMYGLGTRPYLHSSFNCFDCIVICGSIFEVLWSMIQPGTSFGISVLRALRLLRI
FKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEAGTPPTN
FDTFPAAIMTVFQILTGEDWNMVMYDGIESQGGVKKGMVFSVFFIVLTLFGNYTLLNVFL
AIAVDNLANAQELTKDEQEEEQAANQKMALQAAKEVAEVSPLSAANLSIAAVTVNSERLD
ATEHFLDCKEQQKNHKGCKSVWEQRTSELRRQTLMNSREALYNELDPEDRWKVSYSRHIR
PDMKTHLDRPLVVDPQENRNNNTNKTHPGDIQPQHTHQLLHKQPNFNEGESGGGGGGSEP
WAALERGDSTGSRRSLLGSESHGVGRESHRRHQHGERCSQARQHHKTAKDEGEGGGKRHR
SKGRERGPECEHADGGERKHRHHRHEGEGRKERGVRHRTRKDGHGSGPTLSTTRPIQKTL
SRQDSQYSEDLDNAMNNKLATQPPSNSTPHDSLLNLANSAHTAGLAHTDTESSLILTNPS
STTANVTSTGHLSMNPDYTAVDIPPMFPSSNAILQVNKNANTEPLPKKEDTKGDDDDDEK
DDAGPKPMPPYTSMFILTTTNPFRRLCHYIVTLRYFEMCILLVIAMSSIALAAEDPVWPD
SPRNNVLRYFDYVFTGVFTFEMLIKMVDLGLVLHQGSYFRDLWNILDFIVVSGALVAFAF
TGSSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFI
FAVVAVQLFKGRFFYCTDESKELERDCRGEYLVYEKDNEVRAQKREWKKYDFHYDNVLWA
LLTLFTVSTGEGWPQVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVAL
IIITFQEQGDKMMEEYSLEKNERACIDFAINAKPLTRHMPQNKQTFQYRMWEFVVSPPFE
YTIMALIALNTIVLMMKYDGASDAYEAVLANLNIVFTSLFSMECILKIIAFGVLNYFKDA
WNIFDCVTVLGSITDILVTELGMNNFINLSFLRLFRAARLIKLLRQGETIRILLWTFVQS
FKALPYVCLLIAMLFFIYAIIGMQLFGNIAIEEDGESAINQHNNFRTFFQALMLLFRSAT
GEAWHDIMLSCLGKKVCDPLSGNVEAECGSEFAYLYFVSFIFLCSFLMLNLFVAVIMDNF
EYLTRDSSILGPHHLDEYVRIWAEYDPAACGRISFRDMYEMLRHMSPPLGLGKKCPARVA
YKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGEGGVDKHQMDAELRKEMMAIW
PNLSQKNLDLLVTPHKSATDLTVGKIYAAMMIMEYYRQSKAKRTQAIHDEQNRTPLMFQR
LEPPSPSQDVGQGLTGLPETQQHPANHLPVDERIPESQSWVTARAQEMSQKAGSWSPEGQ
HPDDPADNRRHSQTVEMREMGRDGYSDTEHYLPMEGHGRAASMPRLPADNQQPRRKGRHR
GDNLTTITDNSPMKRSASSLGHGRQGRSMRGEDYTMDRVIPEEGHRHGHRHRDRSHRASE
RSLSRYTDADTGLGTDLSTTTQSGDLPSKERDRGRAKDRKHHHHHHHHHGSLDKEHYGHE
RERGDYGHRGSGERDRRWSRSPSEGRECLTHRQGSSSVSGSPVPSTSGTSTPRRGRRQLP
QTPATPRPHVTYSPVVRKPIGGTPPPGQQNRLPAPTSHRFSPPGPEPPLPPPHHGSPRSA
RHAHWDQPAPPRPASAPPNPRHAPTPRHLLSRGP
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagatgtttattaagatgtatgggctggggaccagaccttatttgcactcctcc
ttcaactgttttgactgcattgtcatttgtggcagcattttcgaggtgctctggtctatg
atccagccaggaacctcgtttgggatcagtgtgttacgagctctcaggttactgaggatc
ttcaaagtgaccaagtattgggcgtctctgaggaacctggtggtgtctttgttgaactcc
atgaaatccattatcagtttactcttcctccttttcctcttcatcgtggtctttgctctg
ctgggcatgcagctttttggaggacagtttaattttgaagccggcacaccacctacaaac
tttgatacttttcctgcagcaataatgacagtatttcagatcctgacgggtgaagactgg
aacatggtcatgtatgatgggatcgagtctcagggcggagtcaaaaagggcatggtcttc
tcagtcttcttcatcgttcttacactcttcggcaactacactttgctcaatgtgttcttg
gctatcgctgtggacaatctggccaatgcacaagagctgaccaaggatgaacaggaggaa
gagcaagcagccaatcagaaaatggctcttcaggcggccaaggaagtagcagaggtcagc
ccactgtctgcagccaacctctccattgctgccgtgacagtaaactctgagcgtcttgat
gcaacagaacactttctggactgtaaagagcaacagaagaaccacaaaggttgtaaatcg
gtatgggagcagcgcactagcgagttgagacgacagaccctgatgaacagcagagaggct
ctttacaatgagttggaccctgaagatcgctggaaggtctcatactcccgtcacattcgt
cccgatatgaagacacatctggatcggccgctggtcgtggaccctcaggagaaccgcaat
aacaataccaacaaaactcatccgggtgacatccagccccagcacactcatcagctcctg
cacaaacagcccaacttcaatgagggggagagtggaggaggaggtggagggtctgagccc
tgggcagcgttggaaaggggggactccacagggtctcgtcggagtcttttaggctccgag
agccatggggtgggtagagagtctcaccgcagacatcagcatggcgagcgctgcagccag
gcccgccaacaccataaaactgcaaaggatgagggagagggcggagggaagagacacagg
agtaagggcagggaaagaggacctgagtgtgagcatgcagatggaggagagcggaaacac
agacatcatcgccatgagggcgaaggaagaaaagagagaggggtgcgacaccgtaccagg
aaggatggccatggaagtggccccactctctcgaccacccgtcccattcagaagactctg
tccaggcaggacagtcagtacagtgaggacctggacaatgccatgaacaacaagcttgcc
acccagccacctagtaactccactcctcatgatagtctgctcaatctggccaacagtgcc
cacactgccggcctggcacatactgacactgagagcagcctcattctcaccaacccttcc
tctaccactgctaatgttaccagcactggtcacctgagcatgaatcctgattacactgcc
gtggacattcccccgatgttcccctccagtaacgccatcctacaggtcaataagaatgca
aacacagagcccctgcccaagaaggaggacacaaagggtgacgatgacgatgatgagaaa
gatgatgcggggcctaaacccatgccaccctatacctcaatgttcattctgactaccacc
aacccatttcggaggttgtgccactatatcgtcacgctcagatattttgagatgtgtatt
ctgctggtcattgcaatgagcagtattgccctggccgctgaagaccctgtctggcccgat
tccccccgcaacaatgtcctgcggtactttgactatgtgttcactggtgtgttcaccttt
gagatgctcattaagatggtagatttaggtcttgtcctccatcaaggctcatatttccgt
gacttgtggaacatcctggactttatagtggttagtggtgccctggtggcgtttgccttc
acaggaagcagcaaggggaaagacatcagtactatcaagtcgctgcgtgtgctccgagta
ttgcggcctctgaaaaccatcaagcgtctgccaaagctgaaggctgtctttgactgtgtg
gtgaactctctgaagaatgtgttgaacatactcattgtctacatgctgttcatgttcatc
tttgctgtggtggctgtgcagctcttcaaaggccgtttcttctactgtaccgatgaatcc
aaggagttggagcgtgactgcaggggcgaatatcttgtctatgaaaaagataacgaagtg
cgggcgcagaagcgggaatggaagaaatacgatttccactacgacaatgtgctctgggcc
cttctcaccctcttcacagtttctacgggagaggggtggccacaggtgctgaaacattca
gtggatgcgacctacgagaatcagggcccgagtccaggttaccggatggaaatgtccatc
ttttacgtggtgtacttcgtggtcttccccttcttcttcgtcaacatcttcgtggctctt
atcatcattactttccaggagcaaggagacaaaatgatggaggagtatagcctggaaaag
aatgagagagcctgcatagacttcgccatcaatgctaaaccgctcacgcgacacatgcct
cagaacaaacaaacattccagtaccgcatgtgggagtttgtggtgtctcctccatttgaa
tacaccatcatggcattgattgccctcaacaccattgtccttatgatgaagtatgatgga
gcatcagatgcctatgaagctgtgttagccaacctgaacatagtgttcacctcacttttc
tccatggagtgcatattgaagatcattgcctttggagtgctgaactacttcaaagacgcc
tggaacatcttcgactgtgtgactgtacttggcagcatcactgatattttagtcacagag
ctagggatgaacaacttcataaatctgagttttctaaggctcttcagagctgctcgtctc
attaagttgctcaggcagggtgagaccatacgcatcctgctctggaccttcgtccagtct
ttcaaggctctgccgtatgtgtgcctactcatcgccatgctgttcttcatctacgccatc
attggcatgcagctgtttgggaacattgcgattgaggaggatggtgagagtgccattaac
cagcacaacaacttcaggacttttttccaggcgctaatgctgctcttcaggagtgctaca
ggtgaggcgtggcatgatatcatgctgtcgtgtctgggaaagaaggtgtgtgatcctctc
tctggtaacgtggaggcagagtgtgggagcgagtttgcctacctctactttgtttccttc
atcttcctctgttcctttctgatgctgaatctgttcgtggctgtgatcatggataatttt
gagtacctgacgcgtgactcctctatcctgggaccccatcacctggacgagtatgtgaga
atctgggcggagtatgatccagctgcttgtggcagaatcagtttcagggatatgtatgag
atgctcaggcacatgtctcctccgttaggccttgggaagaagtgccctgcacgggttgcc
tacaagagactgttgcggatggatctgccagttgctgatgacaacacagtgcactttaat
tccacacttatggccttaatccgaactgctctggacatcaagatcgccaagggtggggaa
ggaggcgtagataagcaccagatggatgctgaactaaggaaggagatgatggcgatatgg
cctaatctctctcagaagaatctggaccttctggtgacaccccacaagtcagcgacagac
ctgacagtgggaaagatctatgctgccatgatgatcatggagtattataggcaaagtaaa
gccaaacggacacaggctatccacgatgaacagaatcgaacgccattaatgtttcagcgt
ctggagccgccgtctccaagccaggatgtgggacagggactcactggccttcctgaaaca
caacagcaccctgcaaatcatctgcctgttgatgaaaggatcccagagagccaatcatgg
gtgacagcgcgagcccaggagatgtctcagaaagcaggaagctggagtcctgaaggccaa
cacccagacgaccccgcagataaccgcagacactctcagacagtagagatgagagagatg
gggcgggacgggtactcggacactgagcactatctgccgatggaaggccatggcagggct
gcttccatgcctcgactcccagcagacaaccaacagccacggaggaaaggacggcaccgg
ggagataatctcactaccatcaccgataacagtccgatgaagcgttcagcttcatctttg
ggccatgggcgtcaaggccgttcaatgcggggtgaggactataccatggacagggttata
ccagaagagggtcacagacatgggcatcgccaccgagaccgcagtcaccgtgcgtcagaa
cgctccctgagccgctacactgatgctgacacaggtcttggcactgacctcagcaccacc
acacagtcaggagacctgccatccaaggagagggaccggggccgggccaaagaccgcaag
caccaccatcatcaccatcaccatcacggttctctagataaggagcactacggacacgag
agagaacgaggggactacggccacagagggtctggagagagagaccgccgctggtcccgc
tcaccaagtgagggcagagagtgcctgactcacagacagggcagtagttcagtaagcggc
agtccagtcccctccacctctgggaccagcacgccccgccgcggccggcgtcagcttccc
caaacccccgccacgccccgaccccacgtcacctactctcccgtggtccgtaagcccatt
ggcggcaccccccctccgggccagcagaaccgactccccgctccgacctcccatcggttc
agtccgcccggccccgagcccccgcttccccctccccaccatggctctcctcgctcggcc
cgtcatgcgcactgggaccagcccgccccgccgcggccggcgtcagctcccccaaacccc
cgccacgccccgaccccacgtcacctactctcccgtggtccgtaa
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integrated database retrieval system
