KEGG   Sinocyclocheilus grahami (golden-line barbel): 107583000
Entry
107583000         CDS       T04918                                 
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107583000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgh03019]
    107583000
   03041 Spliceosome [BR:sgh03041]
    107583000
Messenger RNA biogenesis [BR:sgh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     107583000
Spliceosome [BR:sgh03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107583000
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_EML WD40_CDC20-Fz WDR55 Beta-prop_EML_2 ANAPC4_WD40 WD40_MABP1-WDR62_2nd WDR54 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_CAF1B_HIR1 WD40_like Beta-prop_NOL10_N Beta-prop_IP5PC_F EIF3I Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 107583000
NCBI-ProteinID: XP_016124544
LinkDB
Position
Unknown
AA seq 323 aa
MGPVELLHMSVFSQSFSPCGRFLAAGNNYGEIAVFSLSAALSPDASEGSQKPILNFTAHD
GPVFTLLSTDTHLLSAGNGEIRAWSWAELIKKSTKAAWTRKPSYETSLEIPEINAMIINP
KDNSLVVGGGDNNIHIMDMETGIFKSVLKGHTDYIHCLCFKEREGEILSGGEDGAVRIWD
SRTNRPVHCIEVFRYEECAXPQFGKWISCLATDSDWMLCGGGPSLSLWHLRSMSPTSVFP
LPGCQREAVFHQDLIMSVGEGPYVSHCLHGGTVKAQIPCTPSSLNTLALNLKNTEHRVMT
VGGSSHQIDVFTNFSYRAFSLSF
NT seq 972 nt   +upstreamnt  +downstreamnt
atgggtccagttgagctgctgcatatgtccgtgttctctcagagtttctctccctgcggg
cgtttccttgcagcgggtaacaactatggagagatcgcggtgttcagtctttcagctgca
ctgagtccagatgcatcagaggggagccagaagcccatccttaacttcactgctcatgat
ggtccggtgttcactcttctctccacggacactcatctcctgagtgctgggaacggagag
atccgtgcctggagttgggcagagctcatcaaaaaaagcaccaaagctgcatggacaagg
aaacccagttatgagactagtcttgaaataccagagatcaatgcaatgatcattaaccca
aaggacaacagcttggtagttggaggaggtgacaataacattcacatcatggacatggaa
actggcatctttaagtctgtactgaagggccacactgactacatccactgcctgtgcttt
aaagaaagggaaggggagatcctctctggtggggaggatggtgctgtgaggatatgggac
tcacggacaaatcgcccagttcactgtattgaagttttcagatacgaggaatgcgcantg
ccccagtttgggaagtggattagctgtcttgctacggactctgattggatgctctgtggt
ggaggcccatcgctctcattatggcacctccgttccatgtcccccacctctgtcttccct
ttgcccggctgtcaaagggaagctgtctttcaccaggacctgatcatgtcagtaggtgag
ggtccatatgtgtcccactgtttacatggaggaacagtgaaagctcagattccctgcact
ccttcctcactcaatacactggctctcaatctcaaaaacactgaacatagggttatgaca
gtagggggcagcagtcaccaaattgatgtgttcaccaacttcagttacagagccttttct
ctgtcattttga

DBGET integrated database retrieval system