Sinocyclocheilus grahami (golden-line barbel): 107583224
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Entry
107583224 CDS
T04918
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107583224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107583224
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
107583224
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
HECT type E3
107583224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
107583224
NCBI-ProteinID:
XP_016124859
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MMLCWGSSASGQLGIGASEASVFEPRSCCMFDGRGLKEVACGSHHSLFLLHDGSVYASGS
NSCGQLGHDKGGWRPELVGALDAQKIAGVSCGQAHSLVVNEQGQVFAWGAGEGGQLGLGA
AEEAVRVPRLIKKLCEHRISQVMCGKQHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLS
PQPLRSLCGIPLAQISAGGDHSFALSLSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLR
SQKVVYISCGEEHTAALTKEGGLFTFGNGSRGQLGHDSTRNEPLPRRVMELMGTEVSQIA
CGRHHTLAFVPSTGLVYAFGCNTQGQLGTGLRGNAKSPLPVRNIQPLCIGNTHTKAECYT
IGKIHSGGDHNFLLLSTTKEGSSCPEDFRIMNTTKSIAVINSESLDSWRMKLHDNSDSSI
TNDIILLFSSTACWNASFLDQSDDGHFKTNPKVPGIDFNAVRLLFETLMKPAFARLLEQM
YKSIVVFLLTGGKALLMPVFLESYTSAALRLLEKLHKVNLKVHRVEYNHFYIPDISRLVD
IQEDYLKWFLRKADIKMRYPPVQGSVTLCAYPFILNAQAKTTVLQTDAELQMQMAVSGAN
LHNVFMLLTMEPLLARNPFLVLHVRRNLLVSDALRELTVYNDVDLKKPLKVIFDGEEAVD
AGGVTKEFFLLLLKELMDPIYGMFTQYSESNLLWFSDKCFVEHNWFHLIGIICGLAIYNS
TVVDLHFPLVLYKKLLNVSPTLDDLKELSPTEGRSLQQLLEYEGDVEETFCLNFAITREY
YGITEVKELVQGGKTITVDKTNRCDCTRSLIQYVFSDSVQEQYSAFSSGFLKVCGGEILS
LFQPSELMAMVVGNNNYNWEEMEKNASYKGEFSASHPTVKMFWEVFHEFPLEKKKQFLLF
LTGSDRIPIHGMASLRIVIQSTAAEEHYLPVAHTCYNMLDMPCYQTKETLRHRLTQAVEQ
YEGFSLV
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgctggggaagcagtgcctcgggtcagctgggcatcggtgcgtctgaggcg
tctgtctttgagccgaggagctgttgcatgttcgacgggaggggtcttaaagaagttgcg
tgcggcagccatcactcactcttcctgttgcatgatgggagcgtttacgcttctggctcc
aacagctgtggtcagctgggccatgacaagggaggctggagaccagagctggttggagct
ctggatgctcagaagatcgccggcgtgtcgtgtgggcaagctcactctctggtggtgaac
gagcaggggcaggtgtttgcctggggggccggagaaggagggcagctcggtctgggtgcg
gctgaagaggcggtccgcgtgcccaggttgattaaaaaattgtgcgagcatcgaatctca
caagtaatgtgtggcaaacaacactgcatagcactttcgaaagatggtcagttgtttgta
tggggagagaactccagcggtcagctgggtttagggaagggggagccaagcactctgtct
cctcaaccgctcagatctctgtgtgggatcccactggctcagatcagcgctggaggagac
cacagcttcgccctgtcgctctctggagccgtgttcggctgggggaagaacagcgccggg
caactaggcctcaatgacgagcaagatcgggctgttccctgtcacatcaagttcctgcgc
tcacagaaggtggtgtacatcagctgtggagaggagcacaccgctgccttgacaaaggaa
gggggtctgttcacatttggaaatggttcaagaggacagctgggccacgattccaccaga
aacgagcctcttccacgcagagttatggagctcatgggcactgaagtgtctcagatcgct
tgtgggcggcaccacaccctggcattcgtgccctccactggtctggtttacgctttcggc
tgcaacactcagggccagctgggtacaggcctcagaggaaatgctaagagcccacttcct
gtcagaaacatccagcccctgtgcatcggaaatacacacacaaaagccgagtgctacacc
attggtaaaattcacagtggaggcgatcacaatttcctgttgttgtcgactactaaggag
ggttcatcttgtcctgaggatttccgaattatgaataccaccaaaagcatcgctgtgatt
aattctgagagtctggacagctggaggatgaagctccatgacaacagcgattcaagcatc
accaatgacatcatactcctgttttcctcaactgcatgttggaatgccagctttttagac
caaagtgatgacgggcatttcaaaaccaaccccaaagtccctggcatcgatttcaatgct
gttaggctgctgtttgagacgctgatgaaaccagccttcgcaagacttttggagcagatg
tacaaaagcattgttgtgtttctgttgactggtgggaaggcgctcctgatgcctgtgttt
ctggagagctacaccagtgcagctctacgactgctggagaaactacacaaggtcaatctg
aaagtccatcgtgtggaatacaaccacttctacatccctgatatctccaggctggtggac
atccaggaagactacctcaaatggtttctgcgcaaagctgatattaaaatgcgataccct
ccagtgcagggttctgtcacgttatgtgcctatccgttcatattgaacgcacaagccaag
acaaccgtgctgcaaacagatgctgagctgcaaatgcagatggcagtaagcggcgctaac
ttgcacaacgtcttcatgctgttgactatggaacctttgctggcaagaaaccctttcctg
gttctccatgtacgaaggaacctcttagtcagcgatgctctccgggagctcacagtctac
aatgacgtagacttgaagaagccacttaaggtcatctttgatggagaggaagctgtggat
gctggaggagtcactaaggagttcttcctgctcctactgaaagagctgatggatccgatc
tatggcatgttcacccaatattcagagtccaatctgctgtggttctctgacaaatgtttt
gtggagcacaattggttccatttgattgggatcatttgtggtttggccatctataactcc
actgtggtggacttgcactttcccctggtgctctacaagaagcttctgaacgtttcgccc
actctggatgacctgaaagagctttcgcctacagagggaaggagtcttcagcagctcctg
gagtatgagggtgatgtggaggagaccttctgtctgaactttgcaattacgagagagtat
tacgggatcacagaagttaaagagctggtacagggcgggaagaccatcactgtggacaag
acgaacaggtgtgattgtacacggagtcttattcagtatgtgttcagtgactctgtacag
gagcagtattcggccttctccagcggttttctgaaggtctgtggtggggagattctctct
ctattccagccctctgagctcatggccatggtggtgggcaacaacaactacaactgggag
gagatggagaagaatgcctcctacaagggcgagttctctgcatcccacccaacagttaag
atgttttgggaggtgtttcatgaatttcccttggagaaaaagaaacagtttttattgttt
ttgacaggcagtgaccgcatccccatccacggcatggccagtctacgcatcgtcatccaa
tccactgctgcggaagagcactaccttcctgtggcccacacctgctataacatgctggac
atgccctgctaccagaccaaagagaccctgcggcaccggctcacgcaagccgtggagcag
tacgagggcttcagtctggtctga
DBGET
integrated database retrieval system
