Sinocyclocheilus grahami (golden-line barbel): 107583734
Help
Entry
107583734 CDS
T04918
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
107583734 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgh03400
]
107583734 (fan1)
Enzymes [BR:
sgh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
107583734 (fan1)
DNA repair and recombination proteins [BR:
sgh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
107583734 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
DUF4363
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
107583734
NCBI-ProteinID:
XP_016125516
LinkDB
All DBs
Position
Unknown
AA seq
1007 aa
AA seq
DB search
MESQTCKGSSSNRGSARRLSVTKKKSQKVSAIKERTSNGVGVASITSFFRNTPPCKLACP
LCGKLVPRYKINEHIDSQCQRFLGEDLEDALAVSDDKQEKKTNTPSYGAVTRNDGKEKSP
GEKDADMSPYFKKNCVMRQDSSETNLQAKPVKTFGLGSLSSKLSRRALRLSGESEMGHTH
VSGKEETHDAELSSSQKENCMKSLIFESKSGGMDTDNTFPTEPVASNQPQVKSIEKSVTV
MAESSSSADIQSVKSSSSFRVRKRKSEELPKKDTNTTETSFIHKKSRYKTVNRHETNVKS
AQTEASSDVVPLSESQIKSKITNKDTERKPSTTPANESEAIGVEKASEGSEHQHIRQPYY
LQNFRTVLEAVLENEDDRMLFNEDDFSTIHTFQQLSVSGQMLYVRLFQRKLKWLQVSKLE
YTEISSDLRTVIQELVACGFLQTESELYDIQEVLDLLPAPELRNLAKTFHLGRGGNGTQK
QQLVEGLLQLGKQRSLFVSQNNTAAVILKRAKQAAGSCVRLCRRSRAVFSRVLLLFSLTD
TLEEEEMAAGGQGQLYTILLVNSGRLAFPEYTVHRSARLFEARDDLIRYETAMRTLQEVI
AAMQTGSWEDAYVLYATAKATWQEIKESCDLSHQEQLPVFLRCFTVGWTYTRILSRGVEI
LQRLRRYEDSVEELRNLLSQPVYCVDSRGRWWDRLALNLQQHLKQHEQAICAIRDGLNDP
LVRSGHQLSLHQRASRMKESASLKKYRLLLRDLPTVHVQDVTHVTIRGQLFPHEGGMGKS
VFLRAANEDERSTEGRGTMVMCSVEELALEHYRTLGFDQGIHGEGSTFSSLFGLLMWDII
FIDGVPDVFRNPYQTCPLDLHTDCFYGNRREAIEARAEMLREASPETLQELLADVWNAQE
GRVCALINWERFSSLQQAQSLVACLGGHFLSGVVLRMAKDYRHCRGGLPDLVVWSTYNKK
YKLVEVKGPNDRLSQKQQIWLDELHKLGADVEVCHVTATGARGARRE
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggaatctcagacgtgcaaaggcagctcatcaaatagaggcagtgccaggagactctca
gtgacaaagaaaaagagccagaaggtcagtgcaatcaaagagagaacaagcaatggagtt
ggggttgcttccataacttcatttttcaggaatacaccaccgtgtaaactggcatgtcct
ctgtgtggcaaacttgtacctcgttacaagattaatgaacatatagactctcagtgtcag
aggtttcttggagaggatcttgaagatgcactggctgtcagtgacgataagcaagagaaa
aaaaccaacacaccctcttatggtgcagtaactcgaaatgatgggaaagagaaaagccca
ggagagaaagatgctgatatgagtccgtattttaaaaagaactgtgtgatgaggcaagat
tcatctgaaacaaatttacaagctaaaccagttaaaacgtttggtcttggaagtttgtcc
tctaaactgtctagaagagcacttcgactttcaggagaatcagagatgggtcatactcat
gtctctggaaaagaagagacccatgatgcagaactgagcagctcacaaaaggaaaattgc
atgaagagtttaatttttgaatctaaatccggtggcatggatacagataacacattccca
acagagccagtggcttcaaaccaacctcaagtgaaaagcattgagaaatctgtgaccgta
atggcagaatcaagcagcagcgctgacattcagtcagtgaaatcttcatcgtcattcagg
gtacgaaagcggaaatcagaggagttgcctaaaaaggatacaaacactacagaaacctct
ttcatacataagaaaagtagatataaaactgtaaacagacatgaaacgaatgtcaagtca
gctcaaactgaggcctcgtctgatgttgttccattatcagagagtcaaatcaaaagcaag
atcacaaacaaggacactgagaggaagcccagtaccacaccagccaatgagtccgaagcg
ataggcgtagagaaagccagcgaagggtcagagcatcagcacatccggcaaccgtattac
ctgcagaactttcggactgtccttgaggcggtgttggagaatgaggatgataggatgctc
ttcaatgaagatgacttctcaactattcacacttttcagcagctctcagtatctggtcag
atgctttatgtccgtctatttcaaagaaagctgaaatggcttcaggtcagtaagttggaa
tacacagagatcagctcagacctcagaactgtcattcaggagctggtcgcatgtggcttc
ttacaaacagaatctgagctttatgacatccaagaagttttggatctgctgcctgcaccg
gagctcagaaacctggccaaaacctttcatcttggccgtggagggaatgggactcagaaa
cagcagttagtagaggggctactccagcttgggaaacagcgatcactctttgtcagtcaa
aacaacacggctgcagtcattctcaagagggccaagcaggctgcaggttcctgtgtgcgt
ctgtgccgcagatcacgtgccgtgttctcccgtgtcctgctcctgttctccctcacagac
actttggaggaggaggagatggccgctggaggtcaggggcagctctacaccattctgctt
gtcaattctggccgtctagctttcccagagtatacagtacatcgctcagccagactgttt
gaggccagggatgacctcatcaggtatgaaacggcgatgcgtacgctgcaggaagtgatt
gctgcaatgcaaacaggcagttgggaggatgcctatgtcctctatgctacagcaaaggcc
acctggcaggagattaaagaatcctgtgacctaagccatcaagaacaactgcctgttttt
ctgcggtgtttcactgtgggctggacctacactcggatactgtctcgaggagttgagatt
ttacaaagacttcgccgctatgaggactctgtggaggagctcaggaatcttctgtcccag
ccagtgtattgtgtagacagtagggggcgctggtgggacagacttgcactcaatctccag
caacacctaaaacaacatgagcaggccatctgtgctatccgggatggactgaatgatcct
ctggtccgatcaggccaccaactatcacttcaccagcgagcttcccgaatgaaggaatct
gctagcttgaagaagtaccgtctgctgctccgagatctgcccactgtgcatgtacaggat
gtcactcatgtgacaattcgaggccagctctttcctcatgagggtggtatgggcaaatca
gtgttcctcagagcggccaatgaggatgaacgctccacagagggacgagggactatggtc
atgtgttctgttgaggaactggctctggaacactacaggacgcttggtttcgatcaaggt
attcatggtgaaggctctacattttccagcctttttggactcctcatgtgggacatcatc
tttatcgatggggttcctgatgtcttccgaaacccctaccagacttgtcctttagatttg
cacactgattgtttctatggtaaccggcgggaagccatcgaggcgcgtgctgagatgtta
cgcgaggcatctcccgagacgctgcaggagctgcttgctgatgtgtggaacgcacaggag
gggagagtgtgtgcgctgataaactgggagcgtttctcctcccttcaacaggcacagagt
ctagtagcatgtctgggtggccacttcctgagcggtgtggtcctcagaatggcaaaggac
tacaggcattgcagaggaggacttccagatctggtagtctggagcacgtacaacaagaag
tacaagttggtggaagtaaagggtcctaatgaccgtctgtcccagaagcaacagatctgg
ctggatgagctgcataagcttggggccgatgtagaagtttgtcatgtcactgccactgga
gcacgaggggctcgacgggaatga
DBGET
integrated database retrieval system
