Sinocyclocheilus grahami (golden-line barbel): 107583848
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Entry
107583848 CDS
T04918
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107583848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107583848
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107583848
mRNA degradation factors
5'-3' decay
Decapping complex
107583848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
Pdc1_Ge1
Uteroglobin
EIF3I
Motif
Other DBs
NCBI-GeneID:
107583848
NCBI-ProteinID:
XP_016125689
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MASSSNMDIEGATQHLRDILKLDRPCNSADPSLVESQRKPSFNGELNGVLGADLMGAGRL
AAMVEPTNVTHNSDKLNGQDTQTICLSGDDGSTCVPIRANNVEIVSSRDSSIDSKARGSN
KVKIQPVAKYDWEHKYYYGNLIAVSNSYLAYAIRGANNHSMIRVLRLGSTERSLLKGFTG
AVTDLAFAHLDSTLLGCVDEAGNMFIWQLTSHSSKIQDEVLVHIRRPEDTPLNSNRRLIW
CPFIPEDNDENPEDACQTLALLHEDRAEVWDLDILRSNNSSWPVDATDLKEGFITIRGHT
ARISEGALSPDGTVLATASHDGYVKFWQIYIEGQDQPRCLHEWQPHNGRPLSCLLFCDNH
KKQDPEVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDLFNSSVLPSLKASLDLSA
EFLILLTIHLKKSDQISGFSPPLMLSPSLLREASLLCEASPYSHRLPLPYFLSPPPQVSP
PNLPLSLDLQAIEPMVVPQASPTRVRSPDVISSASTAMSQDIPEIASETLQRGLASASAD
SVPVLHSDSMASAASVLHLLSPRARSSAEHSLLPLELGAASVDGEQRLNNTPSLLETALS
QENAVAAGGSCSDSSVNHTWPAAPDITRETRNSHRDNGLGDCSREEIKDRHISSPYHRRT
YHLTQNDSQDASAEQSLIFADITDVSRLLKKTVTERRMERILAEGQSRNQQLQDQLVQQL
VQTLNNSLCNRLDKILREEMKKTVPQSISKSLEPVTSQMSCTIAAKLTAVEVTLKENVTK
VVKSKNTTDAIGRAAAEAMQGPIQSAYKETFQSIVLPVFERGCQSMFQQINDSFKQGTHE
YIQQLETHIKNRKQRDQDAQDPVIGQLQQMIDTLQNSQDQLATTVTASVCSDVQHQLHMI
VGNLQDSILTQVQRIVKGEVSLAMKEQQAAVTSSIMQAMRSAAGTPVPSAHLDYQAQQAS
ILQLLQQGQLNEAFQLALSAADLNLVLYVCETIDSQQVFGQQPCPLHQAVLLSLIQQLST
NLSTRTELKISYLEDAVMNLDHGDPVTRDHMSAVLSQVRQKLLHFLQQDAHSPLSKRARR
LMMMLQGLVNH
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagttccaacatggacatagagggcgcgacccagcaccttcgggacatctta
aaactggatcgtccctgtaattcggccgatccctctttggtagagagccagagaaaacca
tctttcaatggagagttgaatggtgttctgggagcggatcttatgggagcaggacgactt
gcggcaatggtggagccaactaacgttactcacaactcagacaaacttaatggacaggac
acgcagactatctgtctttcaggagacgatgggtccacctgtgtccccatcagagcaaac
aatgtggaaattgtgtccagtcgtgactctagtattgacagtaaggctcgtggcagcaac
aaggttaaaattcagccagtggccaaatatgactgggagcacaaatactactatggcaat
ttaatagccgtgtctaactcatacttggcttatgccatcagaggtgcaaacaatcattct
atgatccgagtgctgcggctgggatcaacggagcgttcgctgctgaagggcttcacaggt
gcagtcacagaccttgctttcgcccacttggactccaccctgttgggctgcgtggatgag
gctggaaacatgttcatttggcaactcactagccacagcagcaaaatacaagatgaagtg
ttagttcacatccgaaggcctgaggacactccactaaattccaaccgcagactcatctgg
tgtcccttcatcccggaggacaatgatgagaacccagaggatgcgtgtcagacactggca
ctccttcatgaagacagagctgaggtttgggatctcgacatcctccgatccaataacagt
tcatggcctgtggatgccactgacctgaaagagggtttcatcaccattagaggacacaca
gcacgcattagtgagggagcgctgtcccctgatggcactgtcttggccacagccagtcat
gatggatatgtaaagttttggcaaatctacattgaaggacaggatcagcccagatgcctg
catgaatggcagccacataatggacgtcctctttcctgcctgctcttttgtgacaaccac
aagaagcaagacccagaagttcctttctggcgcttcctgatcactggagctgatcagaac
caggaactgaagatgtggtgcacagtgtcatggacgtgcttacaaaccatcaggttttct
ccagatctattcaacagcagtgtgctacccagcctgaaggccagtttggacctgtctgca
gaatttctcattctcttgactatccatctgaagaaatcagatcagatttcaggtttttct
cccccactgatgctctctccatccctcctgcgagaggcctctctgctctgcgaagcttct
ccttattcacacagacttccccttccttatttcctatctcctcctccacaggtttcccct
ccaaaccttcctctctccctggatctccaggccatagaacccatggttgtcccccaggcc
tctccgaccagagttcgctctccagatgtcatctcctctgcttctacggcaatgtcccag
gacatccctgagatcgcctcagagaccctgcagagggggctggccagtgcatctgctgac
tcagtccctgtcctgcattctgacagcatggcatcagccgcatcagtcctccacctgctg
tctcctagagcccggagcagtgctgagcacagtttgctgcctctcgaattgggtgcagca
tctgtggatggagaacagagactcaataacacaccctccctgctggagacggctctgtca
caggagaacgcagtagcggctggaggatcctgttctgacagcagcgtgaaccacacctgg
cccgcagcacctgatatcacacgagaaactcgcaacagccacagagacaatggtttggga
gactgctctagggaggaaataaaggacagacacatttcttctccctaccacaggcgcact
tatcacctgactcagaatgacagtcaagatgcaagtgcagagcagagtctgatctttgct
gacatcactgatgtgagccgtctgctgaagaaaacggtcacggaaagaagaatggagcga
attctggctgaaggacaaagccggaaccaacagctccaggaccagctggttcagcagctt
gtccagacactgaacaacagtctctgcaatcggctagacaaaattttgcgtgaagaaatg
aagaagaccgtcccacagtccatatcgaagagtctagaacctgtgaccagccagatgagc
tgcaccattgctgccaagttaaccgcagtggaagtaacactgaaggaaaatgtcaccaaa
gttgttaaatccaagaacactacggatgctatcggtcgtgctgctgctgaggccatgcag
ggccccatccagtcagcctacaaagagaccttccagagcatcgtgctgcccgtgtttgag
agaggctgccagtccatgtttcagcaaatcaatgacagcttcaaacagggaacccacgag
tacatccaacagctggagacacacattaagaacaggaaacagcgggaccaggatgcacag
gatcctgtgattggccagctgcaacagatgattgacacgctccagaattctcaagaccag
ctggccaccactgtgacggccagcgtgtgctctgacgttcagcatcagctccacatgatc
gtgggaaatctgcaggactcaatcctgacgcaggtacagcgcatagtgaagggagaggtg
agtctggccatgaaggagcagcaggcagctgtcacctccagcatcatgcaggccatgcgc
tcagccgcaggaacacctgtaccctctgcacatctggactaccaggcccagcaggccagc
atactgcagttactacagcagggccagctcaatgaggccttccagctggctttatccgca
gcagacttgaatctggtgctgtacgtgtgcgagaccattgactcccagcaagtgtttggc
cagcagccctgtccactgcatcaggccgtccttctgtctctcatccagcagctctccacc
aacctgagcacacgcacagaactcaagatcagctatcttgaagatgctgtaatgaacctg
gaccatggagatccagtcaccagagaccacatgtctgcagtgctgtcccaggtacgacag
aagctcttacacttcctgcagcaggacgcccacagccctctgagcaagcgcgcacggcgc
ctcatgatgatgctgcagggcctggtcaatcactag
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integrated database retrieval system
