Sinocyclocheilus grahami (golden-line barbel): 107583861
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Entry
107583861 CDS
T04918
Name
(RefSeq) DNA-binding protein SMUBP-2-like
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgh03009
]
107583861
03012 Translation factors [BR:
sgh03012
]
107583861
Enzymes [BR:
sgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
107583861
5.6.2.5 RNA 5'-3' helicase
107583861
Ribosome biogenesis [BR:
sgh03009
]
Eukaryotic type
Other ribosome biogenesis factors
107583861
Translation factors [BR:
sgh03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107583861
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_19
AAA_30
zf-AN1
Viral_helicase1
DEAD
ResIII
Helicase_RecD
AAA_22
UvrD-helicase
Flavi_DEAD
PhoH
AAA_16
nSTAND3
T2SSE
SRP54
SLFN-g3_helicase
Herpes_ori_bp
IstB_IS21
AAA
NPHP3_N
AAA_33
UvrD_C_2
AAA_25
AAA_7
AAA_5
Zot
cobW
ABC_tran
ATPase
Glyco_transf_21
RL
Motif
Other DBs
NCBI-GeneID:
107583861
NCBI-ProteinID:
XP_016125699
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
IVRAWQENLSPKNLQHKGVYLLKLQIASQHTGMYGRLLVVFEPRKSIGPSILPSNTFGPG
DIIGLYQAEGQDQPSQLGSGVVTRVTQASLTVAFDDTQDGINLDRDGLYNLMKLANDVTY
RRLSSALKSLNGYSSGPASHLISVLFGYSEPGILSHQHTLEFSNTGLDNSQKEAVSFAIS
QKDVAIIHGPPGTGKTTTVVEVILQAVKQKQKVLCCAPSNVAVDNLVERLAKSKVKVLRL
GHPARLLESIQKHSLDAVLAHSDNTNIISDIRKDMDKAFNEMKKARDKGQRSNLRLEIRE
LRRELRTREEIAITQILKRADVILATNTGASDDGPLKHLPNDHFDLVVIDECAQALESSC
WIALLKACKCILAGDYKQLPPTIKSQSAASKGLSVSLMERLIKKYGDPVVRMLTTQYRMN
GAIMQWASEQMYEGKLIAHPSVEKHLLRDLAGVADVEETRIPLLLIDTAGCGLNEMEDTD
EQSKGNQGEVDIVALHIKALTEAGVQVKDIAIIAPYNLQVDLLRQKLSHKYAELEIKSVD
GFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVAVTRARRQLVVVCDSQTVRKHDFLKS
LVDYMSEHGEVRTAFEYLEDCVAQNYIRDEKDKQTNSNDAASAKQKPKNQGNKTEQEQKK
SADNKSRGVNQSNVQPEQNKNTNSYHPKPKDADQRKEIKEQLLNFLKDSNETELQFPSTL
NSHERLLVHELSEEMGLRHESQGEGKNRRITVSRPPSGLEKSVEPEQPDMIACTAAKLQE
ELQKGPSQPAVDLKSLHLERMRREQEKREEKKQQKQQSVRWEPDSNASKRQSVKKPKGTS
KGNTKIKAGATDIAAAAMPDDDFDGLINAVVKADSVCGFVKCKASVLTLGQLCLYCNRQY
CLSHHIPEVHGCGDKAKAQARMRISKEGVLYAGSGQKDKSVDPNKKAYLQRKLDSKLKDM
ASQRKTKAKDKEN
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atcgtcagagcatggcaggagaatttatctcccaagaatttacagcacaaaggagtgtac
ctgctgaaacttcagatcgcaagccagcatactggcatgtatggcagacttctggtagtt
tttgaacccaggaaaagtataggaccctcaattctgcccagcaacaccttcggacctggt
gatattataggtttgtatcaggcagagggtcaggatcagccatctcagctgggttcaggt
gtggtgacacgtgttactcaagcatcactgacagtggcttttgatgacacgcaagacggt
ataaacttggacagagatggactttacaatctaatgaagctggcaaatgatgtgacctac
aggagactgtcaagtgccttaaagtctttaaatggatacagcagtggtcctgcgtctcac
ctgatcagtgtcctctttggttactcagaaccagggatattatcacatcagcacacactg
gaatttagcaacactgggttagataattctcagaaagaggctgtgtcctttgcaatatct
cagaaagatgttgcaatcatacatggaccaccaggaactggcaaaaccactacagtggtt
gaagtaatcctgcaggcagtaaaacagaaacaaaaggtcctttgctgtgctccttccaat
gtggctgttgataacttggtggagcgcctggcaaagagcaaggtcaaggttttaagactg
ggtcacccagcccgcctgcttgagtcgattcagaagcactcgctggatgcggtccttgca
cacagtgacaacaccaacataatttctgatattcgcaaggacatggacaaagcttttaat
gaaatgaagaaggctcgagacaaaggccaacggagcaatctgagactggaaatcagggaa
ctgcggcgagagctgaggaccagggaggaaatagctatcactcagatcctgaaaagggcc
gatgttattctagcaactaacactggagcctctgatgatggtcctcttaaacatcttcct
aatgatcattttgacctggtggtgatagatgagtgtgctcaggctctagagagcagctgt
tggatcgctctgctcaaagcatgcaagtgcatactggctggagattacaaacagctgcca
cccacgatcaaatcacagagtgctgcatctaaaggcctgtctgtcagcttaatggagagg
ctgataaagaaatatggagacccagtggttcgaatgttgaccactcagtaccgtatgaac
ggtgccatcatgcagtgggcttcagagcagatgtatgagggcaaactgattgcacaccct
tcagtggagaaacacttgcttagagacctggctggtgttgctgatgttgaggaaaccaga
attccccttctgctcattgacactgcaggctgtggcctgaatgagatggaggatacagac
gagcagtccaaaggaaatcaaggagaggtagacattgtggctcttcatataaaggcactt
accgaggctggagttcaagtcaaagacattgcgattattgcaccctataatctccaggtg
gatcttttgagacagaaactgtcccataaatatgcagagctggagatcaagtctgttgat
ggcttccagggcagagaaaaggaggcagtggtgttgtcattggtcagatccaacaggaag
ggtgaggttggatttctcgctgaagacagaaggatcaatgtggctgtgactcgtgccaga
cgccagcttgtggtagtgtgtgattctcagactgttcgaaaacatgacttcctcaaatcc
ctagtggactatatgtctgaacatggagaggttcgtactgcctttgagtacctggaagac
tgtgtggcacagaattacatccgtgatgaaaaggacaaacaaaccaacagcaacgatgct
gcgtctgcaaaacagaagcccaagaaccaaggcaataaaacagaacaagaacagaagaaa
agtgcagacaacaaaagtagaggagtgaatcagtccaatgttcagcctgagcaaaataaa
aataccaattcataccatcctaaacccaaagatgctgatcagagaaaagagataaaggag
caacttctgaactttctgaaagactcaaacgagacagagctacagtttccttccacgcta
aattctcacgagcgtctgctagtccacgagctctctgaagaaatgggactgaggcatgaa
agccagggagaagggaaaaaccgtcgcatcactgtgtcccgacctccatcaggactagaa
aagtcagtggagcccgaacaaccagacatgattgcatgtacagcagcgaagctacaagaa
gagttgcaaaaaggaccctcacagccagctgttgatctgaagagcctacatttggagcga
atgcgcagggagcaggagaaacgagaggagaaaaagcagcaaaaacaacagagtgtgaga
tgggaaccggattctaatgctagtaaaaggcaatctgttaagaaacccaaaggaacttcc
aaaggaaacactaagataaaagcaggagccacagatatagctgcagctgccatgccagat
gacgattttgacggtctcatcaatgctgtggttaaagccgacagcgtttgtggtttcgtg
aagtgcaaagccagtgtcctgacacttgggcagctctgcctctactgtaacagacaatac
tgtctgagtcaccatatacctgaggtgcacggatgtggagacaaagcaaaagcacaagct
agaatgaggataagtaaagaaggggtgctttacgcaggaagtggccagaaggacaaatca
gtggatccaaataaaaaagcatatctgcagagaaaactagactctaaactcaaagatatg
gcatctcaaagaaaaactaaagccaaagacaaagagaactga
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