Sinocyclocheilus grahami (golden-line barbel): 107584422
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Entry
107584422 CDS
T04918
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like isoform X1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
107584422
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgh02000
]
107584422
Transporters [BR:
sgh02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
107584422
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
107584422
NCBI-ProteinID:
XP_016126517
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MNKSAITDDMEMQHDPDLQFKLAYPDSEIIDTGIKTRARGQWSSKVEFILAVAGQIIGLG
NVWRFPYLCYKNGGGVFFIPYVVFLFACGIPLFLMETALGQYTSQGSVTCWRKICPLFEG
LGYGSQVVVFYSSAYYIVILAWAFFYLFSSFSGELPWASCRNWWNSENCVEFDRIGGIRN
LSFMENASSPVKEFWERRVLNITGSVNELGSLRWELALCLLLAWIICYFCVWKGVKSTGK
VVYFTATFPYVMLLVLLIRGLTLPGAIDGITFYLYPNPARLTDPQVWMDAGTQIFYSYAL
CIGCLTALGSYNKYNNNCYKDCVYLCLLNSGTSFVAGFAIFSVLGFMAFEQGVDISMVAE
SGPGLAFIAYPRAVAMMPLSQLWSICFFLMIILLGLDSEFVGLESLMTAITDMHSNFFLQ
GHRRKLFLLLICVGCFLVGLLMVTEGGLYIFQLFDYYSCSGMTLLLFAIAQSICIGWFYG
ADRLYENIVDMIGYRPLTLMKYSWKYITPIVCIGTFVFSLVKFTPLKFNNTFEYPWWGYA
VGWWFTLSSTLMVPIWMIYVIIITPGTLKQRLRILCTPASDLPLTSERRKETL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaagcgcaataactgatgacatggaaatgcagcatgatccagatttgcagttt
aaactggcttatccagattcagaaataatcgacacgggcattaaaacccgagcgagaggc
cagtggtccagtaaagtggagtttatcttagctgttgctggccagatcattggtttggga
aatgtgtggagatttccatatctgtgttacaagaacggtggaggagtgtttttcattcca
tatgtggtctttctgtttgcctgtggcattcctctttttcttatggagactgctttgggt
cagtacaccagccaagggtctgttacctgttggaggaaaatctgcccactatttgaaggt
ctgggttatgggagtcaggtggttgtcttctattccagtgcctactacatcgtcattttg
gcctgggctttcttctatctcttctcttcttttagtggtgaactgccatgggctagctgc
aggaactggtggaattcagaaaactgtgttgagtttgaccgaataggagggataagaaac
ctgagctttatggagaatgcatcatcacctgttaaagaattttgggagaggcgagtattg
aatataactggaagtgtgaatgagctgggcagtttgagatgggagctggctctgtgtctc
ctgctggcctggatcatttgctacttctgtgtgtggaagggagtgaagtccacaggcaag
gttgtgtatttcactgctacatttccatatgttatgctgctggtgcttctgattcgaggt
cttacgttgcctggagccattgatggcatcaccttctacctctacccaaatccagcacgc
cttacagacccacaggtatggatggatgctggaacacaaatattttactcttacgctctc
tgcattgggtgccttacagcattgggaagctacaataaatacaacaacaactgctacaaa
gattgtgtttacctgtgcctgctgaacagcggaaccagttttgtagctggctttgccatc
ttttcagttttgggcttcatggccttcgaacagggggtcgatatctcaatggtagcagag
tcaggtcctggcttggccttcattgcgtatccacgagctgtagctatgatgcctctgtct
cagctgtggtccatatgtttcttcctcatgattattctgctggggcttgacagtgagttt
gtgggtttagagtctctcatgacagccataacagacatgcactccaacttcttcctccaa
ggacatcgtcgtaaactcttcctcctcctcatttgtgtgggctgcttcctcgttggcctc
ctgatggtaaccgagggtggcctgtatatcttccaattatttgattactattcctgcagt
ggaatgaccctcctcctatttgccattgcacagtcaatatgtattggctggttttatggt
gctgatcgtctgtatgaaaatattgtagacatgatcggttatcgtcctttgacactaatg
aaatacagttggaaatatatcactcctattgtgtgtataggcacatttgtcttctctttg
gtcaaattcactcctctgaagtttaacaacacatttgaatacccatggtggggttatgct
gttggctggtggtttaccctctcctcgacattgatggttcccatatggatgatctatgtc
atcattatcactcctggtacactgaaacagagactgcgtatcctttgcactccagcaagc
gatctacctttgacatcggaaagacgaaaagaaaccctgtga
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