Sinocyclocheilus grahami (golden-line barbel): 107584480
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Entry
107584480 CDS
T04918
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107584480
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107584480
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
107584480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
Sina_ZnF
Prok-RING_4
zf-TRAF
zf-rbx1
U-box
TRAF3_RING
RING_XB3-XBAT31
TRAF2_zf
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
107584480
NCBI-ProteinID:
XP_016126603
UniProt:
A0A672QIX2
LinkDB
All DBs
Position
Unknown
AA seq
1055 aa
AA seq
DB search
MGFELDRFKGAVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQSSCPVKCQRIS
TKELNHVLPLKNLILKLDIKCDNHARGCEKIVKLQHLAEHAEMCDYSPAKCRNKGCSEVL
NLKDMDAHMRESCDYRAVGICESGCGLMLTHKEQKLDNHCCLKALKAHNGALQGKVVSLD
KELKKQALKSTKREKSLLAQLSAVHNELQMTALKYQKKFTEYSARIDSLSKSLSPPCKGG
ETKSVTAILHRGSGSLGFNIVGGRPCADNKDGTSNEGIFVSKIVENGPADKEGGLQIHDR
IMEVNGKDLSKATHDQAVEAFRMAKEPIMVQVLRRAPRPKPTGPSGEAQVVDISTQTDIT
FQHIMALSKLPTSSPPVDVLEQYLLPEGHSPAHEYFDPNDFLEGMQHEIEREELEYEEVD
LYRTNIQDKLGLTVCYRTDDEDETGIYVSEIDPNSIAAKDGRIREGDRIIQINGIEIQNR
EEAVALLTSEEHPNVCLLLARPEIQLDEGWMDDDRNDYLDDLHMDMLEQQHHQAMQFTAS
MLQQKKHEEDGGTTDTATLLSHHHEKDSGVGRTDDSTRNDESSEQENLADDQTSASTTLG
SRRRLAYSQDTLGSGDLPFSSESFISADYADADFLGDFPADECERFRELLELKCQMRSAG
SSGTPEQSLFWPSGGVGGGQGSVGEEGIDKELELLNEELRSIELECLSIVRAHRMQQLRE
QCREQSWMLHNSSFHNYNTSVDARRHELADISELPEKSDKDSSSAYNTGESCRSTPLTLE
LSPDNSLRRGNENQAEAGASSGTSGASRILKPLLSPVQEACSPNRSHPTLSKESEAGTQP
EIRERKAGRHAQPQSPYKHAHIPAHAQHYQSYMQLIQQKSVEYAQSQMSLVSMCRDPVAS
ADLGPKMEWKVKIRSDGTRYITKRPVRDKLLKERALRIREERSGMTTDDDAISEMKMGRY
WSKEERKQHAVRAKEQRQRREFMKQSRMDCLKEQVGSAEDKKEVNIIELSHKKMMKKRNK
KIFDNWMTIQELLTHGTKSPDGTRVYNSLLSVTTV
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgagttggatcgtttcaagggggctgtggacccagacttcaaatgcaacttg
tgtaataaagttttggaggatccgctcactaccccgtgcggtcacgtcttctgcgccggc
tgtgtgctgccgtgggtcgtccagcagagcagctgcccggtcaaatgccaaaggatctcc
accaaagagctcaaccacgtcctccctctgaaaaacttgatattaaagttagacattaaa
tgtgacaatcacgcgcggggctgcgagaagatcgtcaaactccagcatctggcggagcac
gcggagatgtgcgattactcccctgccaaatgtaggaataagggctgcagcgaagtgctg
aaccttaaagatatggatgctcacatgcgtgaatcgtgtgattacagagcggtcgggata
tgcgagagtggatgcggattgatgctcactcataaggagcagaagttggacaaccactgc
tgtttgaaagccctcaaagcgcacaacggcgcgctgcaagggaaagtggtcagcctggat
aaggagctgaagaaacaagctctcaaatcgactaagagagagaaatcgcttttggctcaa
ctgtcggcggttcacaacgagcttcagatgacagcgctgaagtatcagaagaaattcact
gaatacagcgccaggattgactcgctgtccaagagcctctctccaccgtgtaagggtgga
gagaccaaaagtgtcacagctatactccatcgtgggtctggatctttaggcttcaatatc
gttgggggacgaccatgtgcggataataaagatggcacttcgaatgaaggaatctttgtg
tcgaagattgtggaaaatggaccggcggataaagaagggggtttgcagatccatgacagg
ataatggaggtcaatggaaaggacttgtcaaaggcaacccatgaccaggctgtggaggcc
ttccgtatggctaaagagcccattatggtccaggtgctacgccgggctcccaggcccaaa
cctacgggcccaagtggggaagcacaggtagtggacatcagcacccagacggacatcacc
ttccagcatatcatggccctcagcaagctgcctacgtcctccccgcctgtggatgtgctt
gagcagtacctgctgccagagggacactctcctgctcatgaatacttcgaccccaatgat
ttcctagagggcatgcagcatgagatagaaagagaagagctggaatatgaggaagtggat
ttatacagaactaatatccaggataaactggggttaactgtgtgctacaggaccgatgat
gaagatgagactgggatctatgtcagtgagattgatccgaacagcattgctgcaaaagat
ggacgaattcgagagggagatcgaatcatccagatcaatggcattgagattcagaaccgt
gaggaagcagttgctcttttaaccagtgaagaacacccgaatgtgtgcctgctattggct
cgaccagagatacagctggatgaaggctggatggatgatgacagaaacgactacctggat
gacctccacatggatatgttagagcaacaacaccatcaggctatgcagttcacagcaagc
atgctccagcagaagaagcatgaggaggatggaggtacaacagacactgctacgctgctc
tcccaccaccatgagaaggacagtggagtgggccgcacagacgacagcactcgtaacgat
gagagctctgagcaggagaatcttgcagatgaccagaccagcgcttccaccacactaggc
agccggcgcaggctcgcctacagtcaggacaccctaggcagtggtgacctccctttcagc
agcgagtccttcatttctgcagactatgcggacgcggatttcttgggtgactttcctgct
gacgaatgcgagcggtttcgtgagcttttggagctcaagtgccagatgcggagcgcgggc
agcagtggtaccccagagcagagcttgttctggccaagtggtggcgtaggtggcggacag
ggcagcgttggcgaggagggcatcgacaaagagctggagcttctgaatgaggagctccgc
agcattgagctcgagtgcctgagcatagtccgagcacatcgcatgcagcagttgcgtgag
cagtgccgcgaacagtcctggatgctccacaacagcagcttccacaattacaacacaagt
gtggatgcaagacgccatgagctagcggacatcagcgaactcccagaaaagtcagacaag
gacagctccagcgcatacaacactggcgaaagttgtcgtagcacaccgctcacgctagag
ctctccccagacaactctttgcgacgtggaaatgaaaatcaggccgaagcaggggccagt
agtggtacttcgggtgccagcagaattctcaaacctctactgtcgcccgtccaagaggct
tgcagccctaacagaagtcatccgaccttgtcaaaagagtccgaggctggaacccagcct
gaaatccgtgaacgcaaagctggtcgccatgcccagccccagtcgccctacaaacatgcc
cacatcccggcccatgcccagcactaccagagctacatgcaactgatccagcaaaagtcg
gtggagtatgcccaaagtcaaatgagcctagtcagcatgtgcagggatcccgtcgcttct
gctgacttgggacccaaaatggaatggaaagtgaagattcgcagtgacggtacgcgatac
attaccaagcggcctgtccgggacaagctcctgaaagagcgagccctacggatccgagag
gagcgcagcgggatgactacagacgacgatgccatcagcgagatgaagatgggccgctac
tggagcaaagaggagcgcaagcaacacgctgtccgtgccaaagaacagcgtcagcgcagg
gaatttatgaagcagagccgtatggactgtctgaaggagcaagtgggcagcgctgaagac
aagaaggaggtcaatatcattgaactgagtcacaaaaagatgatgaagaagcggaacaag
aaaatctttgacaactggatgactatccaggaactgttgacccatggtacaaagtccccc
gatgggacacgagtgtacaactccctgctgtcagtgaccacggtgtag
DBGET
integrated database retrieval system
