Sinocyclocheilus grahami (golden-line barbel): 107584805
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Entry
107584805 CDS
T04918
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04140
Autophagy - animal
sgh04148
Efferocytosis
sgh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107584805
04148 Efferocytosis
107584805
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107584805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107584805
Membrane trafficking [BR:
sgh04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107584805
Hops complex
107584805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
107584805
NCBI-ProteinID:
XP_016127054
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
MAFVTANWNPLGDAFYRKIELYEMGWNLKDGLRDCLVAAAPYGGPIALLKAHNRRSPSAR
PQLEIFSSSGLPLASFPWKSGVVKQLGWTVSDDLLCVQEDGTVLVYDLLGGFKRHFSMGN
EVSQSQVLETKIFHSPYGTGVAILTGALRFTLATNIDDIKLRRLPEVPDLQGAPSCWAVL
TQDRQSKVLVANGSHLFVLDNTACTPVTPPGLSPQASSIVHMCVSFSYKYLALLTDSGHV
WMGTSNLKEKLSEVDTKIKAPPKQMAWCRRPKSQQPSAVVMWDGLLLVVGECKETIQYHL
DDDSILVPELDGVRIISGTHHELLQEVPGACEEIFKIASMAPGALLLEAHKEYEKESQKA
DEYLREIKEQSLLSEAVRQCVEAAGHEHEPETQKTLLRAASFGKCFLSNFPPEQFVSMCR
DLRVLNAVRDYTVGIPLSLTQFKQMTIQVLIDRLVYRKLYPLAIEVCCYLKTPEYQGVSR
VLKHWACYKVQQKEESDEVIAKAVSVKLADAAGISYSEIATKAYESGRTELAIKLLEFEP
RSGEQVPLLLKMKKSPLALSKAIESGDTDLVYTVVMYLKNELNRGDFFMMLRNQPVALSL
YKQFCKHQEQDTLKDLFNQDDDHEELGNFYVKASYKEQRLEARIAHLQSAVDEYYKAKKE
FSAKTTEDEMRLLRFQRKLEEEKGEQLVGFSLHDTMTTLLSVGLHKHVEQLYKDFRVPDK
RFWWLRLKALAEKEDWEELEKFSKSKKSPIGYLPFVEVCIKHHNKYEARKYVSKVTLEQK
VKAHLAVGDVEGAAEAAIERRNESEIGTVLSRCAATTDHLLVERLNRAKATVAKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgtcacagcgaactggaaccctctgggcgatgctttttacagaaagatcgaa
ttgtatgagatgggctggaatctgaaagatggtctgagagattgtctggttgctgcagct
ccatatgggggtcccatcgctctcctaaaggcacataaccgacgctctcccagtgccaga
cctcagttagagatcttctcttcctcaggactgcctctggccagctttccatggaagagt
ggagtggtgaagcaactgggttggacggtgtctgatgacctactgtgtgttcaggaggat
ggcactgtgcttgtctacgatctcttgggtggcttcaagagacacttcagcatgggcaat
gaagtttctcaaagtcaggtgctggagaccaagatattccattcgccgtatgggacaggt
gttgccatattgacaggtgccttgcgattcactttggccacaaacattgatgacataaaa
ttgaggcggttacctgaggttccagatctacagggggcgccctcatgctgggcagtcctg
actcaggacaggcaaagtaaagtgctggtggccaatggatctcatctgttcgtcttagac
aatacagcttgcacacctgtgactcccccaggcctctctccacaagcgtccagtatagtt
cacatgtgtgtctcattcagttataagtatctggcgctcctcactgactctggccatgtg
tggatgggcacgtcaaacctaaaggagaaactcagtgaggtggacaccaaaatcaaagct
cccccgaaacagatggcctggtgtcgcaggcccaagagtcagcagccatcggctgtggta
atgtgggatgggctcctcctagtggtgggagagtgtaaagaaacaattcagtaccatctg
gacgatgactcaattctggtgccagaactggacggggtccggatcatcagtggaacacac
catgagctgctgcaagaggtcccaggtgcatgcgaggagatctttaaaattgcctcaatg
gctcctggagcactactgctagaggcacataaagaatatgagaaagagagtcagaaggca
gatgagtatctgagagaaattaaagagcagagtctactgagcgaggctgtgaggcagtgt
gtggaggccgccggacatgaacatgaacctgagacacagaaaacactcttgagggcagcc
tcatttgggaagtgctttttgagtaattttcctccagagcagtttgtcagcatgtgtaga
gacctgcgggtgttgaatgcagtccgagactataccgtcggcattccactttccctcact
cagttcaaacagatgaccatacaagtgctcatcgacagactggtgtatcgtaaactctat
ccactggctattgaggtttgctgctatttaaagactccagaatatcagggagtgagccga
gtactcaaacactgggcctgctacaaggtccagcagaaagaagaatcggatgaagtcata
gcaaaagctgttagtgtgaagcttgctgacgctgctggaatctcctattctgaaatcgcc
actaaagcatatgagagtggacgcacagagctcgccattaagttgttggagtttgagcct
cgctctggtgagcaggtcccactgctgttaaaaatgaagaaaagccctctggctttaagt
aaagccattgagagtggagacacagacctcgtgtacacggtggtcatgtacctgaagaat
gagctgaacagaggagacttcttcatgatgttgaggaaccaacctgtggctctgagcctc
tacaaacagttctgtaagcatcaggagcaggatacactaaaagatcttttcaatcaagat
gatgatcatgaagaacttggcaatttctatgtaaaggccagctataaagagcagagactg
gaagctcggattgctcatttacaaagtgctgtggacgagtactacaaagccaagaaagaa
ttttctgccaagacaacagaagatgaaatgcgtctgctgcggtttcagaggaagctagag
gaagagaagggtgagcagctcgtgggattctctcttcatgacactatgaccacgctgctg
tctgtggggctgcacaaacacgtcgagcaactttacaaagacttcagagtgcccgacaag
aggttctggtggctgaggttgaaggctctggctgagaaggaggattgggaagagctggag
aaattttccaaaagcaaaaagtcccctattggatatctgccgtttgttgaggtgtgcatt
aaacaccataacaaatatgaagccaggaaatatgtgtcaaaagtcacactggagcaaaag
gtgaaagctcaccttgctgtgggggatgtggaaggtgccgcagaggctgctatcgagagg
cgtaatgaatcagagatcggtactgttctgtcacgctgtgcagccaccactgatcatctt
ctggtggaacgcctcaaccgtgctaaagccactgttgccaaaaagtga
DBGET
integrated database retrieval system
