Sinocyclocheilus grahami (golden-line barbel): 107585119
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Entry
107585119 CDS
T04918
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107585119 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgh03021
]
107585119 (smarcc2)
03036 Chromosome and associated proteins [BR:
sgh03036
]
107585119 (smarcc2)
Transcription machinery [BR:
sgh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107585119 (smarcc2)
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107585119 (smarcc2)
PBAF complex
107585119 (smarcc2)
GBAF(ncBAF) complex
107585119 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
NACHT_N
PaaA2
Motif
Other DBs
NCBI-GeneID:
107585119
NCBI-ProteinID:
XP_016127478
UniProt:
A0A672SYM9
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFLTIEKSLVQNNCLSRPVIYLSSEIEPKLLGKLKDIIKRHQGTVTEDKLSSSHVVVP
IPASLEDEEWVRPVMKRDKQMLLHWGYWPDSYDTWISASEVEAAVEDPPTAEKPRKVHAK
WILDLDQFNEWMNEEDYEVGEGLPRRKRISAKTLTDEVSAPDERKDKKPSSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEQEDLTKDLDEPSPVPAVEEATLPKTV
TKKDSDSTPVKGGTMTDLDEQEDESMETVGKEEEEGSLSVKGEPVKGSDLHEDNVTEQTH
HIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLT
STACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLV
PLQPKASQTSSSQQMLSFPDKVKDKPADLQNFGLRTDVYSKKSGPAKTKNAASATREWTD
QETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSSSLGPLAHQP
IPFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAA
RASGRPDPLYGLEGSGIAGTGLEDADKPSEDGSEENKSSDGQSSQDKRDNKESKDGAIEE
EEKQGENGKKEEERVREGETEKETEKTDSEMADGEKEKERKEGLEEVQRDGESEGEKKAK
VERDVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEE
LETIMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQHQSNQPANQSG
STPSVPHQPVTNASAPPTTQSSASVSTPNAHSEAPPPASHSSPPTNAQTGSAHESSTQLP
GDSLYPNAPVPPTQ
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggcggtacggaagaaagacggcggcccgaatgtaaaatatttcgaagcgtctgatact
gtctcgcagttcgacaatgtccgggtttggctgggcaagaattataaaaagtatattcaa
gcagagccccctaccaataaatctttgtcaagtctggtggttcagctgcttcagtttcag
gaggaagtgtttggccggcatgtcagcaaccctcccctcactaaactaccgatgaagtgt
tttttggatttcaaatctggaggagctctgtgtcatattctggctgctgcctacaagttc
aagagtgatcaaggatggaggagatttgacttccagaatccttcgagaatggaccgcaat
gttgaaatgttcttgactatagaaaagtctttggtacagaataactgtttgtcccgacct
gtgatttacctgagttcagagatagagcccaagctactgggaaaactgaaggacatcatc
aaacgacaccaggggactgtgactgaagataagctgtccagctctcatgtagtggtgcct
attcctgctagtctagaggacgaagagtgggttcgtcctgtaatgaagagagacaaacag
atgctgctacactggggctactggcctgatagttatgacacatggatctcagccagtgag
gtggaggctgctgtggaggatccgcccactgctgagaaacccaggaaggtccatgccaag
tggattctggacctagatcagtttaacgagtggatgaatgaggaagactatgaggtagga
gaaggattaccgaggaggaagagaatttcagcaaagactctcacagatgaagtgagcgct
ccagatgaaaggaaggataaaaaacccagcagtgccaaaaaaaggaagcgttccccgtct
ccatctcctacccctccaccacaagagagcaagaagaaaaacaccaagaaagggcccact
actccctacactaagtccaaacgaggacagagagaggaagaacaggaagatttgacaaaa
gatttagatgaaccctcacctgtgcctgcagtggaggaagcaacactacctaaaacagtg
actaagaaggactcagattctactccagtgaaaggaggcactatgactgacctggatgag
caagaggatgaatcaatggagactgtagggaaggaagaagaagaaggttctctgagtgtg
aaaggagaaccggtgaagggttcggaccttcatgaggataatgtcactgaacagacccat
catatcattatccctagctatgctgcttggtttgactataacagtgtccatgctatagag
cgcagggcactacctgagtttttcaatgggaaaaacaagtcaaagactcctgaaatttat
ctggcataccgtaacttcatgatcgacacatacagactgaacccacaggagtatttgacc
tccacagcctgccgtaggaacctggctggagatgtttgtgccattatgagggtccatgca
ttcctggaacagtggggcttgattaactatcaggtggattcagagagtcggcccactccc
atggggcctccacccacctcacactttcatgtgctggcagatactccatcaagtctggta
ccactacagcctaaagcatcccagacttcatcctctcaacagatgctgtcattcccagac
aaagtaaaggacaaaccagctgacttgcagaactttgggttgaggacagatgtgtacagt
aagaagagcggcccagctaaaactaaaaatgctgccagtgccactcgggaatggacagac
caggagacgctgctactgctagagggtctagaaatgtataaagatgactggaataaagta
tcggagcacgtgggaagccgcacccaggatgaatgcatcctccacttcctgcgtctacca
atcgaagacccctacctggaggacagctcttcctccctgggcccgctggcccatcagcca
attccattcagtcaggcggggaatcctgtcatgagtactgtggcattcctggcctctgtg
gttgaccctcgagtggcttccgctgcagcaaaatctgcacttgaggagttttctcgaatg
aaggaggaggtcccggctgcgttggtggaggctcatgtgcgtcgagtggaggaggcggcc
agagcaagtgggagaccagaccctctctatggcctggagggcagcggcatcgcaggaacc
ggccttgaagatgctgacaaaccctctgaggatggaagtgaagagaataagagcagtgat
ggtcaatctagccaagataaaagagacaataaggagagcaaagatggagccattgaggag
gaagaaaaacaaggagagaacggcaagaaagaggaagagagagtgagagaaggggagaca
gagaaagagacggagaaaacagactcagaaatggccgatggcgagaaggagaaagaacgg
aaggagggattagaagaggttcagagggatggagagagtgagggagagaagaaagcaaag
gtggagagagatgtaggagagggaaacttggccactgccgctgcttctgcgctcgctgct
gctgccgtgaaagctaagcacttggcagcagtagaggaaaggaagatcaagtctctggtg
gctctgctggtagagacccagatgaagaaactggagatcaaactcagacactttgaagag
ctggaaaccatcatggacagagagagagaggcactggagtatcagaggcagcagcttctt
gctgatcgtcagtcgtttcatatggagcagttgaagtatgcagagatgagagcccgacag
caacacttccagcagatccaacaccagcaccagagcaaccagcctgccaatcagtctggc
agtactccatctgtaccccaccagcctgtcactaacgcctctgccccgcccacaacacaa
agctccgcctccgtgagcacccctaatgcccacagtgaagctccaccacctgcatctcac
agttctccccccaccaacgcacagactggatcagcgcatgaatccagcactcaactacca
ggggattcgctctatccaaacgcccctgtgcctccaacacagtaa
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