Sinocyclocheilus grahami (golden-line barbel): 107585129
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Entry
107585129 CDS
T04918
Name
(RefSeq) sodium channel protein type 8 subunit alpha-like isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107585129
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107585129
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
107585129
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
IQ
ATP-synt_B
GPHH
FraC
Zip
Motif
Other DBs
NCBI-GeneID:
107585129
NCBI-ProteinID:
XP_016127492
LinkDB
All DBs
Position
Unknown
AA seq
1703 aa
AA seq
DB search
MILTVFCLSVFALIGLQLFMGNLRQKCVIWPFNQTESYLANGSRGFDFNEYIMTDTNFYF
LPGMLDALLCGNSSDAGRCPEGYTCMKAGRNPNYGYTSFDSFGWAFLALFRLMTQDFWEN
LYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATMEEAEQKEAKFKA
MLEQLKKQQEEAQANAMATSAGTVSEDAVENDGGGHLSRSSSEVSKLSSKSAKERRNRKK
KWRKEQEEKGDSEKVVKSESDDGSKRSRFRFRDNRLGRKASIMNQSLLSIPGSPFMSRRS
SIFSFKGSENEFADDEHSTVEESEDRRGSLFVPYRRSSYSGYSQGSSRINPLAPHLGCKR
NSTVDCNGVVSLIGPGPGRLLPEATEVEGKRKLSGSLMVSVDQLNTSFSRKERANSAMTV
VTNTLVEELEESQRKCPPCWYKFANTFLIWECCPIWMKIKEIMNLIVMDPFVDLAITICI
VLNTVFMAMEHYPMSPQFADVLFVGNLVFTGIFTTEMFAKLIAMDPYYYFQEGWNIFDGF
IVSLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLA
IIVFIFAVVGMQLFGKSYKDCVCKIAAATCKLPRWHMNDFFHSFLIVFRVLCGEWIETMW
DCMEVAGQTMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGELNNLQISVI
RIKKGIAWFKIHIRLLVAHILKKKPLEDEDKPLDDMYDKKLNIIGNHTGVDIKCGDLNYP
KNGNGTTSGIGSSVGKYMIDEEPMSFIHNPNLTVRVPIAVGESDFENLNTEDFSSESDVE
NSKDLDDTSSSEGSTIDIKPDEEEMAVVEVVEEYLDPEACWTDACVARYKCCDVPITEGW
GKHWWFLRKTCYLIVEHNWFESLIIFMILLSSGALAFEDVYIEQRKTIQIILEYADRVFT
YIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIVSLIANALGYSDLGPIKSLRTLRA
LRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLYAGKYYYCFNET
SEEMFLIDVVNNKTECLALMNASYTEVRWKNVKINFDNVGAGYLALLQVATFKGWMDIMY
AAVDSRKVEDQPIYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIF
MTEEQKKYYNAMKKLGSKKPQKPIPRPLNKIQGMVFDFVTQQAFDISIMILICLNMVTMM
VETDDQSGETENILYWVNFIFIVAFTGEFVLKLFALRHYYFTNGWNVFDCVVVILSIVGM
FLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFL
VMFIFSIFGMSNFAYVKREVGIDDMYNFETFGNSMICLFMITTSAGWDGLLAPLLNYPPD
CNPEKENPGTTVKGDCGNPSVGIFFFVMYIIVSFLIVVNMYIAIILENFSVATEESADPL
CEDDFESFYEIWEKFDPDASQFITFAKLPDFADTLEHPLRVPKPNIIELIAMDMPMVSGD
RIHCLDILFAFTKRVLGDSGDLDMMRQQMEERFVAANPSKVSYEPITTTLRRKQEEVSAI
IIQRAYRAHLARRGFICKRRPANNKLENGGTNQEKKEGTPSTASLPSYDSVTKPEKEKQD
DNNEGKGRKEKGRNQKDVRESKC
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atgattctgactgtgttctgtctgagtgtatttgccctcatcggtctacagttgttcatg
ggtaatcttcggcaaaagtgtgtcatctggccattcaatcaaactgaatcctacctggcc
aatgggagcaggggctttgacttcaatgaatacatcatgactgacacaaacttctacttt
ctgccaggcatgctggatgcgctgctttgtggaaacagctcagatgcaggacggtgtccg
gagggttatacttgcatgaaggctggacgcaacccaaactacggctacactagctttgac
tcctttggttgggcttttcttgctctcttccgactcatgacacaagacttctgggagaat
ctgtaccaactgactctgcgagctgctgggaagacgtatatgatcttctttgtactggtg
atctttgtgggatcgttctacctggtgaatctgatcctggctgtggtggccatggcttat
gaagaacagaaccaggccaccatggaggaggcagaacagaaggaggctaagtttaaagcc
atgctggaacagctgaagaaacaacaggaggaggcacaggccaatgccatggcaacctcg
gcaggtacagtatctgaggatgcagtagagaacgacggaggagggcatctctcccgcagt
tcctctgaggtgtccaagctgagctccaagagtgccaaggagcgaaggaacagaaagaaa
aagtggaggaaagaacaggaggagaagggtgatagcgagaaggtggtaaagtcagaatcc
gatgatggcagcaagagaagccgcttccgtttcagagacaacagacttgggcgtaaggcc
tctatcatgaaccagtccctgctgagcattcctggctcgcccttcatgtcccgccgcagc
agtatattcagctttaagggctcggagaacgagttcgcagacgacgagcacagcacggtc
gaggagagcgaagaccgccgcggctccctctttgttccgtacaggcgcagcagctacagt
ggctacagccagggttcctcacgcattaacccactggcaccccacctaggctgcaagaga
aacagcacagtggactgcaacggagtggtgtctctgatcgggcctgggcctggccggcta
ctgcctgaggccacagaggtggagggaaagagaaagctctcaggttctcttatggtgtcg
gtggaccagctcaatacttcctttagccggaaagagcgagccaacagtgctatgactgtt
gtcaccaacacgctggtggaagagctggaggagtctcagagaaaatgtccgccctgctgg
tataagtttgccaacacattcttgatatgggagtgctgtccaatctggatgaagataaaa
gagataatgaacctcatagtgatggatccgtttgtagacctggctatcactatatgtatt
gtgctgaacacagtcttcatggccatggagcattatcccatgtcaccacaatttgcggac
gtgctttttgttggaaacctggtgttcacaggtatcttcacaactgaaatgtttgccaag
ctgatagcgatggatccatactactacttccaggagggctggaatatctttgatggcttc
attgtgagcctgagtttggtggagctggggctggctgatgtagaggggctgtctgtgctc
agatccttcagattgctgagggtgtttaagctggctaaatcatggcccactctgaacatg
ctgatcaagatcattggtaactctgtgggagctttgggaaacctgaccctggtgctggcc
atcatcgtcttcatctttgctgtggtgggcatgcagctgtttgggaagagctataaagac
tgtgtgtgtaagattgccgcagctacctgcaagctgccccgctggcatatgaacgacttt
ttccactccttccttattgtgttccgggtgctgtgtggagaatggatcgaaaccatgtgg
gactgtatggaggtggctggacaaacaatgtgtctcactgtattcatgatggtgatggtc
attggaaacttggtggtgctgaacctgttcttggccttgctgctcagctccttcagtgct
gataatctggcagccaccgatgatgacggtgagctgaacaacctgcagatttcagtgatc
cgcattaagaagggtatcgcttggttcaaaattcacatacgtctcctggtggcccacatc
ctgaagaagaaacctttggaagacgaagacaaacctcttgacgacatgtatgacaaaaaa
ctcaacatcataggtaaccacaccggtgttgacatcaaatgtggcgatctgaactacccc
aagaacggtaatggcaccacaagtggcattggtagcagcgtaggaaagtacatgattgat
gaggagcctatgtccttcatacacaaccccaacctaacggtgcgggttcccatcgctgtg
ggagagtcggactttgagaacctcaacacagaggacttcagcagtgagtcggatgtggaa
aatagcaaagatctggatgacaccagctcttcagagggaagcactatcgacataaagcct
gatgaggaggagatggctgtagtggaggtcgtggaggagtacttagacccagaggcctgc
tggactgatgcctgtgtggcacggtacaaatgctgtgacgtgcctatcaccgagggctgg
ggaaagcactggtggttcctgaggaaaacttgctacctcatcgttgaacacaactggttt
gagtcactcatcattttcatgattctgctcagctctggagctctggcatttgaggatgta
tacattgaacagaggaaaaccatccagatcattctagaatatgcagacagagtcttcaca
tacatcttcatcctggaaatgttgctgaaatgggtagcctatggctttgtcaaatacttc
accaatgcatggtgctggctggacttcttcattgtggatgtgtctatagtcagccttata
gctaatgcgctgggctactcagacttgggcccaataaagtccctgaggactttgagggct
ctcaggcccctgagagctttgtcccggtttgagggcatgagggttgtcgtgaatgctttg
gtgggtgccattccctccattatgaatgtgctgttggtgtgtttgatcttctggctgatc
ttcagtattatgggtgtcaacctgtatgctgggaagtactattactgcttcaatgaaaca
tcagaggagatgtttctaattgatgttgtcaacaacaagacagagtgcttagcactcatg
aatgcgagctacacagaggttcgctggaagaatgtgaagatcaacttcgataatgtgggt
gcaggttacctggcactcttgcaagtggccacattcaaaggctggatggacatcatgtat
gctgctgtggattccagaaaggttgaggaccaacccatctatgaggacaacatctacatg
tatatatattttgtcatcttcataatctttgggtccttcttcactctgaatctcttcatt
ggtgtcattattgacaactttaaccaacagaagaaaaagtttggaggtcaggatatcttc
atgactgaagaacagaaaaagtactacaatgctatgaagaaactgggctcaaagaaaccc
cagaaacccatccctagacctctgaacaaaatccaggggatggtttttgactttgtcact
cagcaggcctttgacatttccatcatgatcctcatctgtcttaacatggtaaccatgatg
gtggaaactgatgatcagtcaggagagacagagaacattttgtactgggtaaacttcata
ttcattgtggccttcactggcgagttcgtcctgaaactatttgctctgcgacactactat
ttcaccaatggttggaacgtctttgactgcgttgtcgtcattctgtccattgtgggtatg
ttcctggcagacatcattgagaagtactttgtgtcaccaactttgttcagggtcatccgt
ctggctcgaattggccgtattctgcgtctgatcaaaggagccaagggcatccggacatta
ctgttcgcgttgatgatgtcacttcctgctctgttcaacatcggcttgttgcttttccta
gtcatgttcatcttttccatctttggcatgtctaattttgcctatgtgaaacgagaagta
ggaattgatgacatgtacaactttgaaacttttggcaacagcatgatctgtctattcatg
atcaccacatcagctgggtgggatggcctcttggctcctctcttgaactatccgcctgac
tgtaaccccgagaaggagaacccaggaaccacagtcaagggcgactgtggcaatccctca
gtgggaatcttcttctttgtaatgtacattattgtgtccttcctgattgtggtgaacatg
tacatcgctatcatcttggagaacttcagtgttgccaccgaggagagtgctgatccactg
tgcgaagacgactttgagtccttctatgaaatctgggagaagttcgacccagatgcttcg
cagttcatcacctttgccaagctgccagactttgcagatacattagaacatcctctccgt
gtgccaaagccaaacatcatcgagctgatcgccatggacatgcccatggtgagtggcgac
cgcattcactgcttggatattctgttcgcatttaccaagcgtgtgctgggtgacagcggc
gacctggacatgatgcgacagcaaatggaggagcgctttgtggcggcgaatccctctaag
gtgtcatacgagcccatcactaccacgctgcggcgtaagcaggaggaggtgtcagccatc
atcatccagagggcgtaccgagcccacctggcacgcagaggcttcatctgcaaacgcagg
cctgccaacaacaaactggaaaacggagggactaatcaggagaagaaagagggcacacct
tccactgcatccctgccatcctatgacagtgtaaccaagcccgagaaggagaaacaggac
gacaacaacgaaggcaagggccgcaaagaaaagggccgaaaccaaaaagacgtcagggaa
tccaagtgttaa
DBGET
integrated database retrieval system
