Sinocyclocheilus grahami (golden-line barbel): 107585345
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Entry
107585345 CDS
T04918
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL-like isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03460
Fanconi anemia pathway
sgh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107585345
09124 Replication and repair
03460 Fanconi anemia pathway
107585345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sgh04121
]
107585345
03400 DNA repair and recombination proteins [BR:
sgh03400
]
107585345
Enzymes [BR:
sgh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107585345
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107585345
DNA repair and recombination proteins [BR:
sgh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
107585345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d2
FANCL_d1
zf-RING_2
SLX1_C
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
107585345
NCBI-ProteinID:
XP_016127833
UniProt:
A0A672PDB2
LinkDB
All DBs
Position
Unknown
AA seq
371 aa
AA seq
DB search
MSCLLMRESPMIIALNKEKTVYDGFITVLEKDFRIRISLPPDHQMKQAKLHCCWQMKRLL
HGYQHIVKQRLQHSANLMAFILELRTVLEVALKSQPGCQSFSPPQYYSQLITEMEILGWD
KLLFIDAEFRTLKLKAEDSAGRQHAIAVKLKSKYPTEAPEFSADLPVPLVIMWTSQSTLA
NVHSQFLLNVEALSEFWSVLDEIDEQTWVLEPEKPTKADSMRRIAIGNNVSIKVQIDPRH
PKMLPECCLLGAEHVVTPLRNKLNANMHLWNPDCSVLQNMKDVLEIEFPSPTTHEKSSFS
VECGICYSYRLESAIPDQVCNDPRCGQPFHQVCLYEWLRGLPTSRQSFSIVFGECPYCSK
PITVKMVTGNA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgagctgtttgctgatgagagaaagccctatgatcattgcgcttaataaggagaagaca
gtctatgacgggttcatcacagtactggaaaaagacttcaggataagaatatctctacct
cctgatcatcagatgaaacaggctaaattgcattgttgctggcaaatgaaacggctactt
catggttatcaacatattgtgaagcagaggttacagcattcagctaatttgatggctttt
atcctggaactcaggacagtattggaagtggcattgaagagccaaccaggatgtcagtct
ttctcaccacctcagtattattcccagctgataacagaaatggagatcttaggatgggat
aagctgctcttcatcgatgcagagttccgcacactcaagctgaaggcagaggactctgca
ggtcgtcaacacgccattgcagtcaagctcaagtccaagtatccaactgaggccccagag
ttttctgcagatctccctgttccattggtcatcatgtggacctctcagagcacattagcc
aatgtccacagtcagttcctgctaaatgtggaggctctgtctgagttctggtcggtgctg
gatgagatagatgagcagacatgggtactggaaccagaaaaacccacaaaagcagactcc
atgagaaggatcgccattggaaacaatgtctcaataaaggtacaaattgaccccagacac
cccaaaatgctgccggagtgctgtttgctcggggctgagcacgttgtcactcctttaagg
aataagttgaatgctaatatgcatttatggaaccctgactgcagtgtcctacagaatatg
aaggatgtgttggagatagaatttccatcacctaccacccacgaaaaatctagtttcagt
gttgaatgtggcatctgctactcttatcgacttgagtcagcaattccagatcaggtctgc
aatgacccgcgctgtggccagcctttccatcaagtgtgtctttatgagtggctgagaggt
ctgcccaccagtcgccaaagcttcagtattgtgtttggagaatgtccttactgcagcaag
cccatcactgtgaaaatggtcacaggaaacgcttaa
DBGET
integrated database retrieval system
