Sinocyclocheilus grahami (golden-line barbel): 107585591
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Entry
107585591 CDS
T04918
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04137
Mitophagy - animal
sgh04140
Autophagy - animal
sgh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107585591
04137 Mitophagy - animal
107585591
04148 Efferocytosis
107585591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107585591
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
107585591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1
PAS
PAS_9
PAS_4
TLP-20
Motif
Other DBs
NCBI-GeneID:
107585591
NCBI-ProteinID:
XP_016128159
UniProt:
A0A672RHW9
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MVNSAMKRPSLDQRKVRSRDAARCRRSQETEVFYELAHSLPLPRRIASHLDKAAIMRVTL
SYLRMNRLIQSAGPTKTLTEETENPTDAFYQQALAGFILVMTEEGDMVFLSESVSKYIGI
TQLELLGQNVYEFVHPCDQEELRDILATRPGFSKKKTENSTEHNFFLRMKSTLTHTGRTV
NIKSATWKVLHCTGHMQTFSGDSENASPAGSFLTLLCEPIPHPSSVEFPLDSNTFLTRHN
MDLSFTQCDGRVTELIGYQPDDLIDRSAYEFYHALDFDHVTRSLHILFSKGQVCTSHYRF
LAKNGGFVWTETQATVLYNSRTSQPEAVVCLNFILSGVEEADVVFSLEQTCEKPKPRAEK
LSVLKEEEEEEEEEEDMEEESSTAKLFLQMKENPEDLLQLAPHSGDAVISLTDGVELSFC
RPSSPNTVPECPQDFCTPELRRLLSPIFDRPTKSPPAASPAEELPMEMEGVEKFFALKPE
ESVTLKGQSEAMDELDLDMLAPYISMDDDFQLTFLPQGEMAVPSDMLTKTSRKRCLEDEE
EEDIPVLAAKLEKKPMSGCIEEQLLLSHTLLNSLSDDGLEEFEPPPQKRSQLLTDRDPLL
GGAQALCDTAALMRDTFLSRPPDLKRPIAETMASLT
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggtaaactcggcgatgaaaaggcccagtttggatcagcggaaggtgcgttcacgtgac
gcggcacgctgtaggagaagtcaggagactgaagtgttttacgagctggcccattcatta
ccccttccacgacgtatcgcctcccacctggacaaagctgccatcatgagggtgacgctc
agctatctgcgcatgaaccgcttgatccaatcagcagggccaaccaaaacactgactgaa
gaaactgagaatcccactgatgccttttatcagcaggcactggctggctttattctggtg
atgactgaggaaggggacatggtcttcctctcagagagtgtcagcaaatacatcggcata
acacagctggagctgcttggacagaacgtgtatgaatttgttcatccctgtgaccaagaa
gaattacgagacatccttgccacaagacctggcttttcaaagaaaaagacagagaattcg
actgaacataatttttttcttcggatgaagagcacactcacccacacaggaagaacagtt
aatatcaagtctgcaacctggaaggtccttcattgcacaggacacatgcagacgttcagc
ggagatagtgagaatgcatcccctgctggcagcttcctgactttgctgtgcgaacccatt
cctcacccctccagcgttgaattcccactagacagcaacactttcctcacacgccataac
atggatttaagtttcacacaatgtgacggacgagtcactgagctcattggataccaaccc
gatgatctgattgaccggtctgcctatgagttttatcatgcccttgattttgatcatgtg
accaggagtttacacatcttgttctccaagggccaggtgtgcaccagccattaccgcttc
ctggctaagaatggaggatttgtctggactgagactcaagccactgtcctctacaacagc
aggacctctcaacccgaggctgtggtctgcctcaactttatcctcagtggtgtagaagag
gcggatgttgtgttctcattagaacagacctgtgagaaaccaaagcccagagctgagaag
ctgagcgtgctgaaggaggaggaggaggaggaggaggaggaggaggatatggaggaggag
agcagcactgcgaaactcttcctccagatgaaggagaacccagaggacttactgcagctg
gcacctcattctggagacgctgtcatttccctaacagacggtgtggagttgtccttctgc
cgtccatctagtcccaacactgtcccagaatgccctcaggacttctgtacgcctgaactc
cgtcggctcctttctccaatattcgacaggcccaccaaatctccacccgctgcgagcccc
gctgaagagctgcccatggagatggaaggggtggaaaagttcttcgccctcaaaccagag
gagagcgtaactctgaaaggacaatcagaggctatggatgagcttgatttggacatgttg
gctccatatatctccatggatgatgacttccagttgaccttcctgccccagggtgaaatg
gctgtaccgtcagatatgctgaccaagacttcaaggaaacgatgtttggaagacgaggag
gaagaggacattcctgttctggctgccaaattggagaagaaaccaatgagcggctgcata
gaggaacagcttctgctcagccacacattactgaatagcttgtctgatgatggtttggaa
gaatttgaaccaccacctcaaaagcgaagtcagctcttgaccgacagggacccgctgctg
ggcggagcgcaggcattgtgcgatacagcagctctcatgagggacaccttcctgtcgcgc
ccgcctgacttaaagagacccattgctgaaacaatggcatcccttacttga
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