Sinocyclocheilus grahami (golden-line barbel): 107585876
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Entry
107585876 CDS
T04918
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107585876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgh03009
]
107585876
Ribosome biogenesis [BR:
sgh03009
]
Eukaryotic type
Pre-60S particles
RNases
107585876
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Pox_B6
Motif
Other DBs
NCBI-GeneID:
107585876
NCBI-ProteinID:
XP_016128537
UniProt:
A0A672LQF3
LinkDB
All DBs
Position
Unknown
AA seq
1218 aa
AA seq
DB search
MLRSTGFFRGIDCPFYCERNKGKAGVDGCTRPYCHFRHSKQRRGSSGIYDIKKTKALSAS
PNDQGYDPFSPEVVRPGEHYNGEPPSSLSTGQDVDLGTMELELVNRAIEAVRNEMERDKK
KLSRIGDQEYEPTTSSVKRPKTTASSHQGYDPGSYQMGQASEYIPSPRSSKYTLDSENSS
TNALEYVPTAVSKTSIKKALPPPLSRVKCKYTLDNSKPTSDMEYDPLSNYSAKPTVKEQR
TLCSEGEGRKRFYPEKQGKDEEYVPTAKKPRSTLPKADVPKYTASFSESDEESSGTEYRP
TSIRRMQRKGINIRLKQEQVSGVKGQQRNQVSKTDDVFSQSESDDVESQDVDWTDKKMPV
SQLKNIKSDKLKKEEQESNKKTQKERWESSSADKTSKNLSQKDKNQSKSEDRVCKSKEKL
RKDGTKSKSTEEKNKKIVKIKNEHSHKEKDRGSGDIKKPKMDKPVKTNKVSSKIKDQKNG
KLESSTKDKDKKKSSHGSSSITKDKSKKSSSVVDPKEASEAKQRNLSHIDLFGAESAEED
EEDERIVRKSASAFKRGSLVKNKRRTSEDTSSSAEDDSEVDGDDDGGGDEAVDYSCLQDE
MAYDSDPMEECLRIFNESKEVKTEDKGRQAKQPSREQEEVEEDETESTLTTLFPGQKKRV
SHFKAQGKSESSLNAVPMLQRRMTAQEICYQRIQKAQQQAVQLAAAVKAASASTNPKLGL
SGEKRRVAHRPNASLPSSKPGLADASSRVLSPTRVATDQLSVKAHTSTGILSKTTSTTVQ
KRVAHTPTMKSSAMKRPVIPAEFGAKVPTNVRQRYLNIFIDECLKFCSSEQQAFQMALEE
EKVVYDRSSSKNIYLNVAVNTLKKLRSKSTPTSPVIKSPAVSVNRKSQSHEGVLGGRLAA
TTSYTINRSGKQQDVDPKGAILYNKQKKYAMTEEQLQEHGYPRPHPEMSGQAVVHNLPEK
KNNDPFSKICCRCGAEYKINANGSCVRKEECSHHWGRLRRNRVPGGWETLYSCCSGAVGS
PGCEVCKQHVQDGRKESLDGFVKTFSKPLPVDGNGGVYALDCEMCYTKQGLELTRVTVIN
SDLKVIYDTFVKPGSKVVDYNTRFSGVTQDDLENTTITLRDVQAVLLSMFSAESILIGHS
LESDLFALKLIHSMVVDTAIVFPHRLGLPYKRALRNLMADYLKRIIQDNVGGHDSSEDAR
ACMELMIWKIKEDAKVKR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgttgagatctacggggttctttcgtgggattgactgcccgttttattgtgagcgtaat
aagggaaaagccggtgtagatgggtgcaccagaccctactgtcacttcagacacagcaaa
caaagacgaggctcctctgggatatacgacatcaaaaagactaaagcgctttctgcgagt
ccaaacgatcaaggatatgatccattcagtccagaggttgtaagaccgggtgaacattat
aatggggagccaccgtcgagcctgtcgacgggacaggatgtggacctgggcaccatggag
ctggagttggtcaatcgggccattgaggctgttcgcaatgagatggaaagggacaagaag
aagctttctcggatcggcgatcaggaatatgagccgaccacaagctctgttaagagaccg
aaaaccactgcatcatcccatcagggctacgatcctgggagctatcaaatgggccaagct
agtgaatacatcccatcccctcgctccagcaaatacactttggactctgagaacagcagt
accaatgcactggaatatgtgcccactgctgtctccaaaacaagcattaaaaaggcatta
cctccaccactgtcccgtgtaaagtgtaaatacactttggataattccaaaccaacctca
gacatggagtacgaccctctctcgaactattcagctaagccgactgttaaagaacagagg
actttgtgttcagagggagaggggagaaagaggttttaccctgaaaaacaagggaaagat
gaggaatacgttccaacggcgaagaaacctaggtcgacgttacctaaggcagatgtcccg
aagtacacggcaagtttctctgaatctgatgaggaaagttctggcacagagtatcgcccg
acatccataaggcgaatgcagcgcaagggaatcaacatcaggttaaaacaggaacaagtg
tcaggtgtgaagggacagcaaagaaatcaggtgtctaaaactgacgatgttttctcacag
agcgaatcagatgatgtggagtcccaggatgtagactggacagacaaaaagatgcctgtg
agtcagttgaaaaatataaaatctgataaactgaaaaaagaggagcaagaatccaataag
aagactcaaaaagaaaggtgggaaagttcaagtgcagacaagacatcgaagaatttaagt
caaaaagacaagaaccaaagtaaaagtgaggacagagtctgtaagtccaaggaaaagctg
cggaaagatggaacgaagtcaaagagtactgaggaaaagaacaagaagatagttaagata
aagaatgaacatagccacaaggaaaaagatagaggaagtggcgacatcaagaagcccaaa
atggacaagcctgtgaaaaccaataaggtgtcgtccaaaatcaaagaccagaagaatgga
aaacttgagagcagcacaaaggacaaggacaaaaagaaaagcagccatgggagcagcagc
atcactaaagacaaaagcaaaaaaagcagctcagttgttgatcccaaagaggcaagtgag
gccaaacagaggaatctgagccacattgacttgttcggtgctgagagtgctgaagaggat
gaggaagacgagaggatagtgaggaagtcagcttctgcttttaaacggggaagcctcgtg
aagaataagaggagaacgtctgaagatacatcatcatcagcggaggatgactctgaagtg
gatggtgacgatgatggtggtggtgatgaagcagtggactactcctgtctgcaggatgag
atggcgtatgactcggacccgatggaggagtgtctgcgaatatttaacgaatccaaagag
gtgaagacggaagataaagggagacaagctaagcagccttcaagggaacaggaggaggtg
gaggaggatgaaacagaaagcactttaactactctctttcctggccagaagaagagggtg
tcacactttaaagctcaaggaaagtccgagtcatcgctgaatgctgtgccgatgctgcag
cggagaatgacagcgcaggagatctgttaccagcgcatacagaaggcccagcaacaggca
gtacagctagctgctgcagtaaaggcagcgtctgcatcgaccaacccaaaactggggctc
tctggagagaaacggcgggtggcgcaccggccaaacgcctccttgccctcctcaaagcct
gggttagctgatgccagcagtcgggtgttgtcacccaccagggtggcgaccgatcagctt
tcagtcaaagctcatacatcgacaggcatcctgtcaaagaccacatccactacagtgcag
aaaagagtggcgcacacccccaccatgaagagctctgccatgaagcgtcccgtcattcct
gcagaatttggggccaaggtgcccactaatgtccgccagcgttacctaaacatcttcatt
gatgagtgcctgaagttttgttcctctgaacagcaagcttttcagatggctctggaggaa
gagaaggtggtgtatgacaggagcagcagtaagaacatctacctgaatgtagctgtgaac
acactgaagaaacttcgcagcaagagcacacctacgtctcctgtcatcaagagcccagct
gtatctgtgaatagaaagtctcagtcccatgaaggagtacttggtggaagacttgctgcc
acaaccagctacacaatcaaccgctccggtaaacagcaggatgtggaccctaaaggtgcc
attctttacaataaacagaaaaaatatgcaatgactgaagaacagctgcaagagcatggc
taccccagacctcaccccgagatgtcgggtcaagctgttgtccataacctcccagagaag
aaaaacaatgaccctttttccaaaatctgttgtcgatgtggcgccgagtacaagataaac
gctaatggcagctgtgtgcgtaaggaagagtgcagtcaccactggggaagattacgcaga
aacagagttccaggaggttgggagacactttacagctgctgctctggtgcagttggttct
cctggatgtgaagtgtgtaaacaacatgtacaagatggccgtaaagagtccttggatggt
tttgtgaagacttttagcaaaccgttgccagtagatggaaatggaggtgtctatgcctta
gactgtgagatgtgctacacaaagcaaggtttggagctgaccagagtgaccgtcattaac
tctgacctcaaggttatttatgacacatttgtcaagccaggcagcaaagtggtggattac
aacacacggttttcaggtgtgacacaggatgatctggagaacaccaccatcaccctgaga
gatgtgcaggcggtgctgctgagcatgttcagtgcagagtccattctaattggacacagt
cttgagagtgacctgtttgcgctcaagcttattcacagcatggttgtggacaccgctatt
gtgtttcctcaccgcctgggtctgccctacaaacgtgccctgcgaaaccttatggccgac
tacctcaaacgcattatacaagacaacgttggagggcacgactccagtgaagatgcccgg
gcctgcatggaactcatgatctggaagatcaaagaggatgccaaggtgaagagatga
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integrated database retrieval system
