Sinocyclocheilus grahami (golden-line barbel): 107585942
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Entry
107585942 CDS
T04918
Symbol
sox6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107585942 (sox6)
Transcription factors [BR:
sgh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107585942 (sox6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
107585942
NCBI-ProteinID:
XP_016128610
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MPSSSEVVCEEQRRTGAAKQAEGDSIRIMSSKQATSPFASTPDGGEDGVNQEHMSWEKEE
NLESLVAPQLPLHNLLHNKPPPEELQPISSSVPPESDWDSLMSAQQRMESDSNKVCSLYS
FRNNSTSPHKPEEGARERGDLLSSSAFGTPERRKGSLADVVDTLKQKKLEEMTKTEQDES
CMEKLLSKDWKEKMERLNTGELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDE
QKKLAASQMEKQRQQMELARQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIP
IFPHDQRTLAAAAAAQQGFLFPPGMSYKPGDNYPVQFIPSTMAAAAASGLNPLQLQQLYA
AHLASMQVSPGAKMPLLSQPPNSTGPISPSGLKNEKRASTPLAQVKEEGTQPLNLSARPK
TAEPVRSPTSPTQIFFPGNKSSPNNLSKSGGIPSPIGGMGRGSSLDILSSLNSTALFGDQ
DAVMKAIQEARKMREQIQREQFQHHQQGMEAKLSALTSMGLNNCRSDKERSHYDNLSHHL
GKLGEDGKIGHRVIDLTRPEDFEGGASSTEARVYREPRGRNSNEPHIKRPMNAFMVWAKD
ERRKILQAFPDMHNSNISKILGSRWKSMTNQEKQPFYEEQARLSKIHLEKYPNYKYKPRP
KRTCIIDGKKLRIGEYKQMMRSRRQEMRQFFTVGQQPQTQIPITTSAGVVYPGAITMATT
TPSPHMTSDCSSASASPEPTIPVIQSTFNMKMEPGTMVSNDPVNGVDEMDMYEDFEDEPK
SDYSSENDTQEPVSAN
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccatccagctctgaagtggtgtgtgaagaacagagaaggactggagcggccaaacag
gctgagggggacagtatcagaatcatgtcttccaagcaagccacctctccattcgcctcg
acccctgacggaggcgaggatggagtgaatcaggagcacatgtcctgggagaaagaggag
aacttggagtcactagtcgcccctcagctgcccctgcacaatctgctccacaacaaacct
cccccagaggagctccagccaatcagcagcagcgtgccgcccgaatccgactgggacagc
ctgatgtcagcccagcagcgcatggaatcggacagcaataaagtatgttccttatactcc
ttccggaataactctacctctccacacaagccagaggagggggccagggagcgcggcgac
ctgctgagcagttcagccttcggaacgccagagcgccgcaaaggaagcctggccgatgtg
gtggacacactgaaacagaagaaactagaggagatgacaaagacagagcaagacgaatcc
tgcatggagaaactcctttctaaagactggaaagagaagatggagcgactcaacacaggc
gagctgttaggagaaattaaaggtactccagaaagtctcgcggagaaggagcgacagctc
tccaccatgatcacacagctcatcagcctgcgagagcaactcctggccgcccatgatgag
cagaagaaactggccgcctcacagatggagaaacaacgtcagcaaatggagctggcacgc
caacagcaagagcagattgccagacaacagcagcaacttctgcagcaacagcacaaaatc
aatctcctccagcagcagatccagcaggtccagggtcacatgcctccgctcatgatcccc
atttttccacacgaccagcgcactctggcagcagccgcggcagcccagcagggcttcctc
ttccccccaggcatgtcctacaagccaggtgataactacccggtgcagttcattccatcc
acaatggcagctgctgccgcgtcaggactcaaccctctccagctccagcaactctatgcc
gcccatctggccagcatgcaggtctctccaggagccaagatgcctctgctgtcccagccc
cccaattctactgggccgatctccccgtctggcttgaagaatgaaaagagggcttcaacc
cccctggctcaagtcaaggaggagggaacgcagcctctcaatctctccgctcggcccaag
acagctgagcctgtcagatcccccacatccccgacacagatcttcttcccaggcaacaag
agcagcccgaacaacctgtccaagagcggaggcatccccagccccatcggagggatgggc
cgtggctcgtctctggacattctgtccagcctgaactcaacagcgctgtttggagatcag
gatgcagtgatgaaggccatccaggaagcgaggaagatgagggagcagattcagagagag
cagtttcagcaccatcagcagggaatggaggccaaactgtctgccctcaccagcatgggc
ctgaacaactgcagatctgataaggagaggtctcattatgataacctgagccatcacctg
ggcaaactaggcgaggatgggaagattggtcacagagtcatcgacctcaccaggccagag
gattttgagggaggcgccagctctaccgaggcacgggtctacagggaaccccggggaagg
aacagcaacgaacctcacatcaaacggcccatgaacgccttcatggtctgggccaaagat
gagcgccgcaaaatccttcaggccttcccagacatgcacaactccaacatcagcaaaatc
ttgggatctcgctggaagtccatgacgaaccaggagaaacaaccgttttatgaggagcag
gcacggctcagcaagatccacctggagaagtatcccaactacaagtacaagccccggccc
aagcgcacctgcatcatcgacggcaagaagctgcgcataggcgagtacaagcagatgatg
aggtcgaggaggcaggagatgaggcagttcttcactgtggggcagcagccacagacgcag
atccccatcaccaccagcgcaggcgtcgtctaccccggtgccataaccatggcgaccact
acgccctcccctcacatgacctcagactgctccagtgcctcggccagccccgagcccacc
atccctgtcatccagagcaccttcaacatgaagatggaaccgggcaccatggtgtctaac
gaccccgtgaatggagtggacgagatggacatgtacgaggactttgaggacgagcccaaa
tcggactacagcagtgagaatgacacacaggagccggtcagtgccaactga
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