Sinocyclocheilus grahami (golden-line barbel): 107586229
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Entry
107586229 CDS
T04918
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04270
Vascular smooth muscle contraction
sgh04625
C-type lectin receptor signaling pathway
sgh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107586229
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
107586229
09153 Circulatory system
04270 Vascular smooth muscle contraction
107586229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107586229
Membrane trafficking [BR:
sgh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107586229
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
107586229
NCBI-ProteinID:
XP_016128973
LinkDB
All DBs
Position
Unknown
AA seq
1392 aa
AA seq
DB search
MSDTRSTGTDRTSSILSRNHPPDKRPQSDKQPGTPTHEFDPTDVLVQKSGFVVADRRPES
CGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKQDGAAMRAGVQTGDRIIKVNGTLVTQS
NHVEVVKLIKSGSYVALTVLGRPPGLPQIPLSEVDVALGSPGDYGDPFVTSPNSYNAAER
TSSPLVSWEENSAPLNQRMDNKRMVSKEQQDIQGLKEGYSRTPTPKPLRDIQEAKKYIPH
QQGQLNRATHVSLCLRNSEDGCWVDEDQYKRDFSPEGFWSGSSVSHVQRQFYPASPESQR
ESNCSSPKSTPRDSLNSCPSPEVEDGPDLDSRFSSTIGSPPSRLASEIIAAEDDDFDTDQ
EQVNGQCSCFQSIELLKTRPAHLAAFLHHVISQFDPAPLLCYLYADLYKQTNSKETRRIF
MDFLTFFIDRGANLKVAVPESISSELERRRPELIPEELHRQCIQTMQETLLPDVQRNLED
FRQKRSMGLTLADVELSRLDSEQLVLERERSCAENILSKIDDVLLTSQPTEEEKCSTIQY
VISMYMKHLGVRVKEQRNLESKRVRINFLPSKLRKSKTEKEGEEKLKKPRFPIRVPPRWP
SRVDSVPSGRAGDNIKHRPQKQMSQPALGGSDLIEGGRLRCSQSVEGSDLLQSPSLIASP
PFSASYGSPLDPSGRDSEFSMSPSVMVPRLSDGLQSGDVLDSIYPPCDYIPYNMDQLDED
ADRLLDGGTPKLSRRFEELQSEDDQGSDVYSDVDPPNWQQLVGRDVLAGLTSHEIKRQEV
INELFYTERAHVRMLKVLDSVFYQKLTRDNILPPADIKNIFTNLEEIVQLHMRIADQMMA
IRKKNETSVIDHIGDELLSWFSGGEEEKIKQAVGTFCSNQPFALELIKSRQKKDQRFTSF
MQVAESNRLCRRLQLKDIIPAEMQRFTKYPLLMDNIAKYTDEIEEKDKVRRAAECCRHIL
SHVNQSVKESENKQRLEDYQRRLDLSSLKQSENPMISEFKNLDLTKRKMVHEGPLSWKIN
KDKTIELYTLLLEDILVLLQKQDERVILRCHSKNLAGTADTKHIFSPIIKLSTVLVRSVA
TDNRSFFVISMSKNGAQIYELMAQTVSEQRMWQRQIAQRADVMNAKPHSVIPLPQHDGDR
DGVELSKFSKGSERISTGSIQSAEKDFSPTTALRDCVPDANPGEEDQVPRAGRDGSYLDS
ELLNGRDADSQSCSSKADEALKTLAALKQVLVTQLMAQDEGERLCRSAGSRLLRTTSLRT
PVEHSSPRTPSRAQDYTSGDTGFYECPEDYAAYLVLEGYGGPGESSTDDDIQVRRKESSL
AHSCAADSGISLKFSSPSSGSTSRLSRQVLSHLRCLQANLNHLKEMETKYYNLLRQRPVG
SAADTDESRDKK
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacacggtccacaggcactgacagaaccagtagcattctcagcagaaaccac
cctcccgacaagagaccccaaagcgataagcagcctggtacccctacacacgagtttgac
cctacagacgtgctggtgcagaagagtggatttgtagtggctgacaggagacctgagtct
tgtgggctggttcagagatgcgtgatcattcagaaagatgagaacggctttgggctgacc
gtcagtggggacaaccctgttttcgtgcagctcgtcaaacaggatggcgctgcaatgcgt
gcaggtgttcagacgggggacaggatcattaaggtgaacgggacattggtgacgcaatcg
aaccatgttgaagtggtgaaattaatcaaatctggctcatatgtggccctcacagtatta
ggccggcctcctgggttgccccagatccccctctctgaggtagacgtggctctcgggtca
ccgggggattatggggacccttttgttacatctcccaactcttacaatgcagcggaacgc
acctcctctcctctggtatcatgggaagagaacagtgctccactcaaccaaagaatggac
aacaagaggatggtgtccaaagagcaacaggacatacagggactgaaggagggctatagc
agaactcctacacccaaaccactacgggacatccaggaagccaagaagtacattccacat
cagcagggccagcttaacagggctacacatgtgagtctgtgtctcagaaacagtgaagat
ggctgttgggtggatgaggatcagtataagagagatttcagcccggagggtttctggagt
ggaagttcagtgtcacatgtccagcgccagttctacccggcctctccagagagccaaagg
gaatccaactgttccagtccgaagagcacccccagagacagcctcaactcttgcccctcc
cctgaggttgaggacggccccgacctggattctcgtttctcatccaccattgggagccca
ccctcccgcctggcttcagagatcattgctgctgaagatgatgactttgacaccgaccag
gagcaggtaaacggacagtgcagctgcttccagagtatcgagctgctcaagactcgcccc
gctcatcttgctgccttcctgcaccatgtgatctctcagtttgaccctgcacctctgctc
tgctacctgtacgctgacctctacaaacagaccaactccaaagaaacacggcggatcttc
atggacttcttgacgttcttcatagaccggggggcaaatttgaaagttgctgtgcctgaa
tccatctcctctgagctcgagcggcggagaccagagctgattccagaggaattacacagg
caatgtatacagacaatgcaggaaactctccttccagatgtacagagaaacttggaggac
ttcaggcagaagcgcagtatgggcttgaccctggctgatgtagagctgtctcgtctggac
tctgaacagctggttctagagagagagagatcatgcgctgaaaacatcctctccaagata
gatgacgttctgttgacttcacaacccacagaagaggagaaatgcagcaccatacagtat
gtgatctctatgtacatgaagcatctgggagttcgagtgaaagagcaacgaaacctggag
tccaaacgagttcgaattaattttcttccttccaaactaaggaaaagcaaaacagagaag
gaaggggaggagaaactgaaaaagcctcgctttcccatccgggtgcccccacggtggccc
agtcgcgtcgattcagtaccatctgggagggccggggacaacatcaagcatcggcctcag
aagcagatgtctcagccagctttgggcgggtcagatctgatagagggtggacgtctgcgg
tgcagtcagtcggttgagggctcagacctcctacagagcccgagtttgatcgcctctccc
cccttcagcgcctcttacggctcaccgttagacccctcgggcagggactcagagtttagt
atgagcccgtctgtgatggttccccggctcagtgatgggctgcagtctggagatgtgctg
gacagcatctacccaccctgtgactacatcccatacaacatggaccaactagatgaagat
gcagacagactccttgatgggggcacacctaaactgagtagaaggtttgaagagttgcaa
agtgaggatgatcaggggagtgatgtttactctgatgtagatcctccaaactggcagcag
ctggtcgggcgtgatgttttagcaggcctgacgtcccacgagatcaagagacaagaagtc
attaatgaactattctacacggagcgagcccatgtacgcatgttgaaggtcctagacagt
gtcttctaccagaagctcacccgagacaacatactgccccctgctgacatcaagaacata
ttcaccaacctggaggaaatcgtccagttgcacatgaggatagcagatcaaatgatggcg
atacgcaagaagaatgagacgtcggtcatcgaccacataggagatgagttgctgtcttgg
ttcagtggtggagaggaggagaagatcaagcaagcagtgggcactttctgtagtaaccag
cccttcgccctggagctcatcaaatcccggcagaagaaggaccagcgtttcacctccttc
atgcaggtggctgagagcaatcgactgtgtcgacgattacagctaaaggacatcatccct
gcagagatgcagaggttcaccaagtaccctttactgatggacaacattgccaagtacaca
gatgagatagaggagaaagacaaagtgagacgagcagccgaatgctgtcgacacatactc
agccacgtcaaccagtccgtgaaggagtccgagaataaacagagactggaggactaccag
agacggctggacctctcttccctcaagcagagcgagaaccctatgatctcggagttcaag
aacctggatctcactaaaaggaagatggtccacgagggtcctctgtcctggaagattaac
aaagacaaaactattgagctgtatactttactcctggaagacatcctggtgttgttgcag
aagcaggacgagcgtgttattctcaggtgtcacagcaagaacctcgcaggaacggctgac
acgaaacacatattcagtcccatcatcaaactcagcactgtgctggtgcgctcggtggcg
acagataacagatcattctttgtgatctccatgtccaaaaacggagctcagatttatgag
ctgatggcacaaacagtgtccgagcagagaatgtggcaacggcagattgctcagagggca
gatgttatgaacgctaaaccccacagcgtcattcccttgcctcagcacgatggtgacaga
gacggtgtcgagttaagcaagttcagcaaaggctccgaacggatctccacaggaagcatc
cagtccgcagagaaagacttttcgcccacgacagccctgcgggattgtgtcccggacgcc
aaccctggggaagaggaccaggtcccgagagctggcagagatggctcatatctggactct
gaactcttgaacggcagggatgcagactctcagtcctgttcatctaaagcagatgaggct
cttaaaaccttggcggcgctgaagcaggtgctggtgactcagctgatggctcaggatgag
ggcgagcgattgtgccgatcggctggcagtcgtctcctcaggaccacctctctacgcaca
ccggtggagcacagctcccctcgcacccctagtcgagctcaggactacacctctggagat
acgggcttctacgagtgcccagaggactatgcagcttacctggttctggaggggtacggt
ggcccaggcgagagcagtacagatgatgatattcaggtccggagaaaggagtcgagtttg
gcacacagctgtgctgctgactcaggcatcagcctcaaattctcctcgccctcctcaggc
agcacgtcccgcctcagcagacaggtcctctcacatctacgctgcttgcaggccaacctc
aaccacctcaaggagatggaaacaaagtattataatctacttcgccaaaggcctgttggg
tcagccgcagatacagacgagagcagagataagaaatag
DBGET
integrated database retrieval system
