Sinocyclocheilus grahami (golden-line barbel): 107586549
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Entry
107586549 CDS
T04918
Symbol
clstn1
Name
(RefSeq) calsyntenin-1
KO
K22659
calsyntenin 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sgh04515
]
107586549 (clstn1)
Cell adhesion molecules [BR:
sgh04515
]
Cadherins
Cadherin related
107586549 (clstn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Ig_CLSTN
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
FAM176
PRIMA1
TylF
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
107586549
NCBI-ProteinID:
XP_016129458
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
VYLFSLLVESFEVTFTKEGEICGFRIHGQNVPFEAVVLDKSTGEGVIRAKDKLDCELQKE
HTFTIQAYDCGEGPDGGNMKKSHKATVHIQVNDMNEYSPVFKEKSYKATVIEGKKYDSIL
KVEAVDADCSFQFSQICSYEIVTPDVPFTIDKDGNIKNTEKLNYSKERMYKLTVTSYDCG
KNRASEDVLVKINIKPTCKPSWQGFNKRIEYEPGTGSLALFPSMHLETCEEPITSIQVSI
MLETNHIGKGCDRDTYSEKSLHKLCGASAGTVELLPTPSNSANWTVGLPTDNGHDSDQVF
EFNGTQAIKVPEGVVSTTLKEPFTISVWMRHGPGGREKETILCNSDKTEMNRHHYSLYVH
NCRLVLLLRQEPTESENYKPAEFHWKLDQVCDKEWHHYVLNIEFPAVTLFVDGATFEPFL
VTEDYPLHASKIETQLTIGACWQDLSGHDNDTETLSETLTGGSALMTQYFRGNLAGLMIR
SGKLENKKVIDCLYTCKEGLDVQLPEEVASAVKVEFNPNQSSLTLEGDDIESFEKVMQHI
SYLNSRQFPTPGIRHLRVTTTVKCFNEETCISVPDSEGYVMVLQPEEPKISLSGIDHFAR
GAAEFESTEGVTLFPELRIVSTITREVEVEVEAETEAGGEDDPTVQETVVSEEIMHNLDT
CEVTVVGDELNGDHESLEVDLAQIQQRALEMSSSNVGMVITGVNTMANYEQVLHLIRYRN
WHTEALFDRKFKLVCSELNGRYISNEFKVEVNVIHTANPMDHANNAMVQPQFINQVQHAS
VDLSGHNLANMHQASVVPSAATIVIVVCVSFLVFMIILGVFRIRAAHQGTLRDQENGKEN
EMDWDDSALTITVNPMETYEDQHSSEEEGDEEEEDSEDGEEEDDITSAESDSSEDEGGEQ
EDQQGSSRQQQLEWDDSTY
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
gtttatcttttctcccttcttgtagagagttttgaggtgaccttcaccaaagaaggggag
atctgcggcttcaggattcatgggcagaacgtgccgttcgaggcggtggtgttggataag
tccactggcgagggtgtgatccgggccaaggataaactggattgtgagctgcaaaaggag
cataccttcaccatccaggcctatgactgtggagagggacccgatggcggtaacatgaag
aaatctcacaaggctaccgtccacatccaagtgaatgacatgaatgagtattcaccagtg
ttcaaagagaagtcctacaaagccacagtgatcgagggcaaaaagtatgacagcatcctg
aaggtggaggctgtggacgctgactgctctttccagttcagtcagatctgcagctatgag
attgtcaccccagatgtgccctttaccattgacaaggatggcaacatcaagaacaccgag
aagctgaactacagcaaggaacgcatgtataaactcactgtgacctcatatgactgcggt
aaaaaccgtgcgtctgaggacgttcttgtgaaaatcaacatcaagcccacctgcaaacca
agctggcaaggatttaataaaaggattgaatatgagcctggtacaggaagtctagccctg
ttccccagcatgcacctggagacctgcgaggagccaatcacctccattcaggtcagcatc
atgctggagactaatcacatcggcaagggttgtgaccgcgacacgtactccgaaaaatcc
ctgcacaagctgtgtggtgccagcgctggcactgtggagctgttgcctactccaagcaac
tctgccaactggactgttggcttgcccactgacaacgggcacgacagcgaccaggtgttt
gagtttaatggcacccaggccataaaggtccctgagggtgtggtgagcaccaccctgaaa
gagcccttcaccatctcagtgtggatgagacacggacctggaggcagggagaaggagacc
atactctgcaactctgacaagaccgagatgaacaggcaccactattctctgtacgtacac
aactgtcgtctagtgctgctgctgcgtcaggaacccaccgaatccgagaactacaaacca
gctgaattccactggaaactcgatcaagtgtgtgataaagaatggcatcactatgtgttg
aacattgagttcccagcagtgactttgtttgtggatggtgccacctttgagcccttcctg
gtcacggaggattaccctctgcatgcctccaagatcgaaacccagctcaccatcggcgcc
tgctggcaagacctctcaggacatgacaatgatactgagactctctcagagactttgaca
ggtggcagcgccctcatgactcagtacttccggggaaacctggctggactcatgatccgc
tctggcaaactggagaacaagaaagttatcgactgcctctacacctgcaaggaaggtctt
gatgtgcagcttccagaggaagtagcctctgctgtgaaggtggagtttaaccccaaccag
tcctctctgactctggagggagatgacattgagagctttgagaaggtcatgcagcacatc
tcctacctaaattcccggcagttccccaccccaggaatccgccatctgcgtgtcaccacc
actgtcaaatgcttcaatgaggagacgtgcatctctgtgcctgactctgaaggctacgtg
atggttctccagccagaggagccaaagatcagcctcagtggaattgaccattttgcccgt
ggagcagctgaatttgagagcacagaaggcgttacgctcttccctgagctgcgcatcgtc
agcaccatcacccgtgaggtggaggtggaggtggaagctgagaccgaggccggaggcgag
gatgatccaacagtgcaagagactgtggtatctgaggagattatgcataacttggacacg
tgtgaggtgactgtggtgggagatgaactgaatggagatcatgagagtttggaggtggat
ctggcccaaatccagcagagagctctggagatgagctcttccaacgtgggcatggtcatc
acaggggttaacaccatggcgaactatgaacaggtcctgcatctgatccgctacaggaac
tggcacacagaggctctgtttgacaggaagtttaaacttgtctgctctgaactcaatggc
cgctacatcagcaatgaattcaaagtcgaggtcaacgtgatccatacagccaaccccatg
gatcatgctaacaacgctatggtacagcctcagttcatcaaccaagtacagcatgcttca
gtggacctgtctggacacaacctggctaacatgcatcaggcctcagttgtccccagcgca
gccaccatcgttattgttgtgtgcgtgagcttcctggtgtttatgatcatccttggcgtc
ttccgtatccgtgctgcccaccagggcaccttgagggaccaggaaaacggcaaagagaac
gagatggactgggatgactctgccctcaccatcaccgtcaacccaatggagacttacgag
gatcagcacagcagcgaagaggaaggagatgaggaagaggaagatagcgaggatggagag
gaggaagacgacatcactagcgcagagtcagacagcagtgaggacgagggtggcgaacag
gaagaccagcagggttcaagcagacagcagcagctggagtgggacgactccacctactga
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