Sinocyclocheilus grahami (golden-line barbel): 107586617
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Entry
107586617 CDS
T04918
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03013
Nucleocytoplasmic transport
sgh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107586617
03015 mRNA surveillance pathway
107586617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107586617
03041 Spliceosome [BR:
sgh03041
]
107586617
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107586617
Spliceosome [BR:
sgh03041
]
Complex C
Other components
EJC/TREX
107586617
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
107586617
NCBI-ProteinID:
XP_016129558
UniProt:
A0A672SPR4
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MAVVVRSLQDQLEKAKESLKSVDENIRKLTGRDPSELRPGQNRRLTITGPGGGRGRGINL
LRRALSDSGGGPPAKQRDIEGALLRLAGVQRARRDSRHDSDAEDDDDVKKPALQSSVVAT
SKERTRRDLIQDQTMDERGKQRNRRMFGLLMGTLQKFKQESTVSTERLKRRQEIEQKLEV
QAEQERKKVESERRELFEERRATQTELRLLEHKVELAQLQEEWNAHNSKLIKFIRTKTKP
PIFYLPGRMCSATQKLLEESQKKLNGVFDERREAFAEQLNKMEARPRRQSQRTGDREMED
SRRAEETKKEDQEEGKAGVGRTGNRHDVEMEDEEEDVVEEEGEESSEIREREGNQEQEQS
EKDKHEESEQKAEEEDEEEEEEDVGTSEAKEEQMEVTEVVREDEAQGKLQVESPEATVEE
VGNVQKEEEQETENETQQDVVTDSQQTPESHMEIQPKECKEPQLDVLTPSVTEHDTKQDD
TAPETQQTPLEPDPEIPQEQSQEPSVQPQEAKVDTKEASEETDEARGRAKVRAKRSKSRS
SSSSSSSSSNSSSSGSSSSSSGSSSSSSGSSSSSSSRSRSHGRDRDGRDHKRHRRPSDRE
RRKSGSERGHKSSKGSGRESKGSKDKNSKPDRKRMSSEGSRSGRKPSRSERDRKSDRKDR
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtcgtgcgaagtttgcaagaccagctggaaaaagccaaggaaagcttaaag
agcgtggacgaaaatattcgaaaactaaccggcagagatccgagcgaattaagaccgggt
caaaataggagacttaccatcacaggcccaggtggaggtagggggcgtggaatcaatttg
ctgaggcgtgcactctcagatagtggtggaggacccccagccaaacagagagacatcgaa
ggggcactcttgaggctggcaggggttcagcgagccaggagagattcacgccatgacagc
gacgctgaggatgatgacgatgtcaaaaaaccagcgttgcagtcatctgtggttgctacc
tccaaagaacgtacgcgccgagatcttattcaagatcaaacaatggatgagagaggaaag
cagagaaaccggcgcatgtttggcctattgatgggaacattgcaaaagtttaagcaggag
tctactgtgtccacagagcggttaaaaagacgccaagaaattgagcagaaattggaagtg
caggcagaacaggagcgtaaaaaagttgagagtgaaaggagagagctctttgaagaaaga
cgtgccacacaaacagagctgcggctgcttgagcacaaagtggagctcgctcaactgcaa
gaagagtggaatgcacataattcaaagctcatcaagttcattcgcacgaagaccaagccc
ccaatcttctacctgcccgggcgaatgtgctccgctactcaaaagctcctggaggagtct
cagaaaaaattaaatggtgtgtttgatgagagacgtgaagcctttgcagagcaactcaac
aaaatggaggctcggccaaggcgtcagtcccagaggacaggtgacagagaaatggaggat
agccgtcgggctgaagagacgaagaaagaagatcaagaggagggtaaggctggagtaggg
cggacaggtaacaggcatgatgtggagatggaggacgaggaggaagatgtagtcgaggag
gaaggagaggagagctcagagattagggagagggagggcaatcaagagcaggagcagagt
gagaaggataaacacgaggagagtgagcagaaggcagaggaggaagatgaggaggaggag
gaggaggatgtaggaacaagtgaggctaaggaagagcagatggaggttacagaagttgtg
agggaagatgaggcacagggtaagttgcaggttgagagtccagaagccacagttgaagag
gtaggtaatgtgcaaaaggaggaagagcaggagaccgagaacgagactcagcaggacgtt
gtaacagactctcagcaaacccccgaaagccacatggaaatacagcccaaggagtgtaaa
gagcctcaactggacgtcctgacccctagtgtgacggaacatgacaccaaacaagatgac
acagcgcctgagacccaacagacaccgcttgaacctgacccagaaattcctcaagagcaa
agccaagaaccatcagtccaaccacaagaagccaaggtagacacaaaggaagctagcgag
gagaccgatgaggctcgcggacgggccaaagtccgtgccaagaggagcaagagccgaagt
agcagttcttcttccagttcctcttcaaactcctcctccagtggatctagctcctcttcc
agtggctccagtagcagttcctctggctcctcgtcgtcttccagttcacgctcccgtagt
cacggcagggatagagacggccgagaccacaaacgccaccggagaccgtcggacagggag
cgcagaaagagcggcagtgagagaggacacaagtcctcaaaaggcagtggacgagaaagc
aagggctccaaagacaagaactccaaacctgacaggaagaggatgagttcggaaggaagc
aggtcagggaggaagccctccagaagcgagcgggatcggaagtctgatcggaaggatcgg
cgttga
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