Sinocyclocheilus grahami (golden-line barbel): 107587072
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Entry
107587072 CDS
T04918
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh02010
ABC transporters
sgh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107587072
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107587072
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgh02000
]
107587072
Transporters [BR:
sgh02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
107587072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
107587072
NCBI-ProteinID:
XP_016130174
LinkDB
All DBs
Position
Unknown
AA seq
2294 aa
AA seq
DB search
MSISTQLGLLLWKNFTYRRRQTLQLLTEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRHPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDK
SLDGFKELISAVKVMQNNTAGFKLKDFLRENETLSTFLQQNASFSHNYVQNILKADVNLE
KVLIKGFGVHLRDMCSTTTLEDFVSIPDERVARFTQDLICSAPNSWLDQAERHFKSNLDF
LKPIRSDMWTNATDVRLVAKATDNLLESLGSLAVELASMRSWSDLRNEILFLTENATGSP
SLMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNFQALFGSHNDSDNEPVSVYDNTTTLYCN
NLMKNMEASPISRMIWRALKPLLMGKILYTPHSPATQKILYTPHSPATQKIIHEVNKTFQ
ELGILRDLGGMWEEARPKVWNFMENSEEMDLMRTLLRNNATASFFSAQLAETQWSVEDVI
SFLSKHSEDTRPHGTAFTWRDVFNETDQAIMSISRFMECVNLDKLEPVSTEEKMVNESMS
LLDNRKFWAGIVFLDIQSNSSELPPHVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFED
LRYIWGGFTYLQDVVEHSIIRAVTGTKEKTGVYIQQMPYPCYVDDIFLRIMSRSMPLFMT
LAWMYSVAIIIKGVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISAGLLVLLLK
MGNLLPYSDPGVIFLFLGSFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCV
AWQDYVGFSAKVIASLLSPVAFGFGCEYFALFEEQGVGIQWNNLFSSPMEEDNYNLTTCL
ILMYFDAFLYGVMTWYIEAVFPGQYGIPRPWYFPFSKSYWFGENNTNNTAVYGKKSNAGT
VCIEEEPTHLELGVYIENLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSI
LTGLFPPTSGTAYIMGKDIRSELSSIRRSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSE
EDVKAETEQILTDTGLQHKRKSRASQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPY
ARRGIWDLLLKYRTGRTILLSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGY
YLTLVKKNTEPSLSSCRNSSSTVSFVKKDDNASESSSDAGLGSDQESEAATAIGTTWPES
PVVPVDVALISSLILKHVPASRMVEDLGHEITYVLPYESAKDGAFVELFHDLDDRLADLS
ISSYGVSDTTLEEIFLKVAEDSGVDTEIISDGTLPVPRHRRHAFGADHQSCLKPLTEDDN
FDCNDSDGDPESKETDYLSVSNGKGSYQLKGWNLKRQQFVALLWKRLLYARRSRKGFFAQ
IVLPAVFVCIALVFSLIVPPFGKYPSLALNPWMYEDQFTFISDDAPHDISTQKLLNALFD
DPGFGTRCMEGEPIPDAPCTMGDEEWSTQEVAESVMDIFTSTNWTMDNPSPACECSCNGK
KKMLPECPAGAGGLPPPQIKMSETETLQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEF
RYGGFSLGARSTQVLPPAEEIDDAISRVREIFQLGKNSGSAADRFLKSLSAFINGLDTKN
NVKIWFNNKGWHSIGAFLNVMNNGILRANLPPGKDPRQFGITAFNHPLNLTKEQLSQVAL
MTTSVDVLVSICVIFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPYLYWLANFLWDMC
NYVVPATLVILIFVCFQQKAYVSATNLPVLALLLLLYGWSITPLMYPASFLFKIPSTAYV
VLTSVNILIGINGSVSTFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAM
ADALERFGENRLRSPLEWDMVGKNLFAMAVEGVVFFIITVLIQYRFFFEPKSLSAKLSPI
GEEDEDVARERQRIMSGAGQGDILEIRQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVN
GAGKTSTFKMLTGDSVVTKGEAFLAGKSILREIDEVHQNMGYCPQFDAINDLLTGREHLE
FYAILRGVPEKEVCEVAEWGIRKLGLVKYVDKKAGSYSGGNMRKLSTAISLIGAPPVVFL
DEPTTGMDPKARRALWNCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSV
QHLKNRFGDGYTIILRVAGPDPDLQPVMKFIESELPGSTLKEKHRNMLQYQLPSSLTSLA
HIFSILAKNKEFLRIEDYSVSQTTLDQVFVNFAKDQSDDPSDSSIRRKETAVNMALLSPL
PAKENMEKPIESFV
NT seq
6885 nt
NT seq
+upstream
nt +downstream
nt
atgtctatctccactcagctgggtctgctgttgtggaagaacttcacctacagaaggaga
caaacactccaactgctgacggagattgtgtggcctctctttattttcttcatcctgata
gctgtgaggttgaactacccgccttatgagcaacatgaatgtcactttcccaacaaagcc
atgccctcagcaggcaccctgccctggatccagggcatcatctgcaatgccaacaatccc
tgcttccgacacccaacccctggggaatctccaggagtcgtcggaaacttcaacgattcc
ataatctcacgcctgttttctgatgccaagaagatcttactatacagtcaaaatgacaag
agcttagatggattcaaggagcttatcagtgcagtgaaagtcatgcaaaacaacacagct
ggtttcaagctgaaggacttcctgcgtgaaaatgaaaccctttcgacgttcctccagcaa
aacgcctccttttcccataattatgtgcagaatattctgaaagctgatgtgaatcttgaa
aaggtgctgatcaaaggttttggcgtccatctgagagacatgtgtagcaccaccacactt
gaggattttgtgagcatcccagacgaaagggtggcgagattcacccaagacctcatctgc
agcgctcccaatagctggctagaccaggccgagagacacttcaagtccaacttggatttc
ctcaaacctattaggtcagacatgtggactaatgccactgacgtccgtctagttgccaaa
gctacagacaaccttctggaaagcctgggatcactggctgttgagctggccagtatgagg
agctggagtgacctgcgaaacgagatcctgtttctgacagaaaacgccaccggctcgccg
agtctgatgtaccaggctgtgtcccgtatcgtgtgtggacaccctgaaggcggtggcctc
aagatcaaatccctcaactggtatgaggacagcaacttccaggcgctgttcggcagccac
aacgacagtgataacgaaccagtttcagtctatgacaacaccaccactctatactgtaac
aacttgatgaagaacatggaagccagtcctatctctcgaatgatctggagagcattgaaa
cctctcctgatggggaagatcctctacacgccacacagccctgcaacacagaagatcctc
tacacgccacacagccctgcaacacagaagatcattcatgaggtcaacaagacatttcag
gaactcggaattctacgagatttaggcggaatgtgggaagaagccagaccaaaggtttgg
aacttcatggagaacagtgaagaaatggatttgatgcggacgcttcttcgaaacaatgcc
actgctagtttcttcagtgcccagttggctgagactcagtggagcgtggaggatgttata
agcttcttgtccaagcactccgaggacacgcgtcctcatggaacggcatttacgtggcgg
gacgtcttcaatgagacggatcaggccattatgagcatatcccgtttcatggagtgtgta
aacctggataaacttgaacctgtgagcacagaggagaaaatggtgaacgagtccatgagt
ctcctggataacagaaagttttgggcgggaattgtgtttctggacattcagtccaacagc
tctgaacttcccccacatgtcaattacaagatccgcatggacatcgacaatgtggagcgc
acaaacaagattaaagatgggtattgggatcccggtcccagggctgatccgtttgaggat
ttgcggtacatttggggaggatttacttaccttcaggatgtagttgaacacagcatcatc
agagcagttactgggaccaaagagaagactggtgtttacatccaacagatgccttatcca
tgttatgtagatgatattttccttcgcattatgagccgttccatgccgcttttcatgact
ctggcctggatgtactcagtggccatcatcatcaaaggcgtcgtctacgagaaggaggcc
cggctcaaggagaccatgaggattatgggattggacaatggaatcctgtggttcagttgg
ttcattagcagcctcatccctcttctcatcagcgcaggcctgctggttcttctactcaag
atgggtaatctcctgccctatagtgaccctggcgtaatcttcctcttcctcgggtcattc
gctgtggtaaccatcatgcagtgttttctgatcagtacggcgttcgcacgtgccaacctg
gcagcggcttgtgggggcattatctacttcaccctctacctgccttatgtgctctgtgta
gcttggcaagactacgtgggcttcagcgccaaagtcattgctagcttactgtctccagtg
gcgtttggatttggctgtgagtattttgccctgtttgaagagcagggtgtgggcatccaa
tggaataacctcttctccagcccaatggaagaagacaactacaacctcaccacctgcctc
atcctcatgtactttgatgccttcctgtatggggtcatgacctggtacattgaggccgtg
ttcccagggcagtatggcattcccaggccatggtacttccctttcagtaaatcctactgg
tttggagagaacaacacaaacaacactgcagtttatggaaagaagagcaatgctggaact
gtctgtattgaagaggaacccactcaccttgaattgggagtttacattgagaatcttgtg
aaggtctaccgtcatggcaaaaagctagcagtcgatgggttgacacttggcttctatgag
gggcaaataacttctttcctaggtcacaatggagctggaaaaaccaccaccatgtctatc
ctaactggcctattccctcccacctctggcactgcatatatcatgggcaaagatattcgc
tcagagctcagttccatcagacggagcctcggagtgtgtccacaacacaacgtcctcttc
agcatgttgacagtagaagagcacatctggttctatgcccgtctgaagggtctgtctgag
gaggacgtgaaggctgagacggagcagattctgactgatactggccttcaacacaaacgc
aagtccagggccagccagctatcaggtggtatgcagaggaaactctcggtagctcttgct
tttgttggagggtcaaaggttgttattttggacgagcccactgctggtgtggacccatac
gctcgaagaggcatctgggaccttcttctgaagtatcgtacaggtcggactatccttctt
tccacccatcatatggatgaagcggatattctgggcgatcgtattgctatcatctcccat
ggaaagctttgttgtgtgggctcttcgctctttcttaagactcaactgggaactggatac
tatcttaccttggtgaagaaaaacactgagccttctctcagctcttgcaggaactcgagc
agcactgtgtcctttgttaagaaagatgacaatgcatctgagagcagttcggatgctggt
ctaggtagtgatcaagagagcgaagctgccacagcaattggaactacatggcctgaatct
cctgttgttcctgttgatgtagccctcatctccagtctaatcctgaagcacgttcccgct
tctcgcatggtggaagacctcggtcatgagatcacatatgtgttgccatacgagtctgcc
aaagatggtgctttcgttgagctcttccatgaccttgatgatcggctcgctgaccttagc
atttcgagttatggtgtctcagatactacacttgaagagattttccttaaggtggcagag
gacagtggagttgacactgaaatcatctcagatggaactctgcctgttcccagacatagg
cgacacgcatttggtgctgaccaccagagctgcctcaaacccctgaccgaagacgataac
tttgactgcaacgactctgatggtgatccagaatcaaaagaaaccgactatttgagcgtt
tctaatgggaaaggatcatatcaattgaaaggctggaatttgaagaggcagcagtttgtg
gctttattgtggaagagattgctttatgctcgccgctcaaggaaaggcttctttgcacag
attgttcttcccgctgtgtttgtgtgcattgctctggttttcagtcttattgtgccacca
ttcggaaaatatcccagcctggctctcaatccctggatgtatgaagatcagttcacattc
atcagtgatgatgctccacatgatataagcacacaaaagttactcaatgctttattcgat
gatcctggctttggaacacgatgcatggaaggagaaccaattcctgatgctccctgtaca
atgggcgatgaggaatggtctacacaagaagtggcagaaagcgtgatggacattttcacg
tcgacaaactggaccatggacaacccatctcctgcttgtgagtgcagctgtaatggcaaa
aagaagatgctcccagaatgccctgctggtgcaggtggactgccacctcctcagattaag
atgagtgaaactgagaccctccagaatctgacgggacgaaacatctcagactatcttgtg
aagacctatgcacagatcattgggaaaagcttaaagaacaagatatgggtgaatgaattc
agatacggaggattttcattgggagctagaagcactcaggtacttcctcctgctgaagag
attgacgatgccatctctagagtcagggaaatcttccaactggggaagaactcaggatca
gcggccgaccgtttcttgaaaagcctgtctgccttcatcaatgggctggacactaagaat
aatgtcaagatatggttcaataacaagggctggcacagtattggagccttcctcaatgta
atgaacaatggtatcttgcgtgccaacttaccacctggcaaagacccccgtcagtttggc
atcactgcgtttaaccatccgctcaatctgaccaaggaacagctttctcaagtggcccta
atgaccacctcagtggacgtgctggtttccatctgtgtgatcttcgccatgtccttcgtc
cccgccagtttcgttgtcttcctcattcaggagcgagtgaataaggccaagcacatgcag
tttatcagtggagtgcagccatacctctactggctggctaactttctctgggatatgtgc
aattatgttgttcctgctactctggtgatcctgatctttgtgtgctttcaacaaaaagcc
tacgtctctgcaaccaacctacctgttcttgcccttctactgcttctttatggatggtcc
atcactcctcttatgtacccggcttcattcctcttcaaaatccccagcaccgcttacgtg
gtgctcactagtgtcaatatcctcattgggatcaatggcagtgtgtccacttttgtcatg
gagttatttggaaataatgagatcggtggcattaatgacatcctgaagaacgttttgctc
atcttcccgcatttctgcctgggccgaggtctcatcgacatggtgaagaatcaggccatg
gctgatgctctggagagatttggtgagaaccgtttgcgttctccattggagtgggacatg
gtgggcaagaatctttttgctatggctgtggaaggagtggttttcttcatcatcacagtc
cttatccagtaccgtttcttctttgaacccaagtctttaagtgccaagttgagtccgatt
ggagaggaagatgaggatgtggccagagagaggcagagaatcatgagtggagctggacag
ggagacattcttgagatcagacaactcactaaggtgtacaagcggaaacagaagcctgct
gtcgatcgtctatgtgtaggcattcctccaggagagtgttttggtctgcttggtgtcaac
ggagccggaaagacaagtacttttaaaatgctgaccggagactctgtggtcaccaaagga
gaagcattcttggctgggaaaagtatactcagagaaatagatgaagtacatcagaacatg
ggctactgccctcagtttgatgccatcaatgatctgctgacaggacgggaacacctggaa
ttctatgccattctgcgcggtgtaccagagaaggaagtttgtgaggtggcagagtgggga
atccgtaaactgggcctcgtgaagtacgtggacaagaaagcaggaagctacagcggtggc
aacatgcgcaaactctccaccgccatatcactcattggagccccaccagtggtcttcctg
gatgagcccaccactggaatggaccccaaagcacgacgagcactgtggaactgcatccac
agcgtcatcaaagagggacgctccgtcgtacttacctcacacagtatggaggaatgtgaa
gcgctgtgtaccaggatggccatcatggtgaacggcaggttccgctgtctgggtagcgtc
cagcacctgaagaacagatttggcgatgggtacaccatcattctgagggttgcggggccg
gatcctgacctgcagccggtgatgaagttcattgagagcgagctgccaggaagcaccctg
aaagaaaaacacagaaacatgctgcaataccagcttccctcctccctcacctccctcgct
cacatcttcagcatcctcgctaagaacaaagagtttctcaggatagaggactactctgtg
tcccaaaccactctggaccaggtatttgttaactttgccaaggaccaaagtgacgacccc
tcagacagctccattcgtcgtaaagagacagcggtcaacatggccctcctgagccctctg
cctgctaaagagaacatggagaagccaatagaaagctttgtgtga
DBGET
integrated database retrieval system
