Sinocyclocheilus grahami (golden-line barbel): 107587102
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Entry
107587102 CDS
T04918
Symbol
ncbp1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03013
Nucleocytoplasmic transport
sgh03015
mRNA surveillance pathway
sgh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107587102 (ncbp1)
09122 Translation
03013 Nucleocytoplasmic transport
107587102 (ncbp1)
03015 mRNA surveillance pathway
107587102 (ncbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgh03019
]
107587102 (ncbp1)
03041 Spliceosome [BR:
sgh03041
]
107587102 (ncbp1)
Messenger RNA biogenesis [BR:
sgh03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
107587102 (ncbp1)
Spliceosome [BR:
sgh03041
]
Common components
Common spliceosomal components
Cap binding complex
107587102 (ncbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Barstar
Motif
Other DBs
NCBI-GeneID:
107587102
NCBI-ProteinID:
XP_016130233
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MSRRRHSDESDAGSQPHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEA
DLPNYKSKILRILCAVARLLPEKLAVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKSN
LYSEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDIPQVRSDWYVYVVLSSLPW
VGKELYEKKDVEMDRLLNQIEGYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQVQKL
KKDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPAHSDDAVYPMPHVVFRMFDYTDAPE
GPVMPGSHSVERFVIEENLHCIIKSHWRERKTCAAQLLSYPGKNKIPLNYHIVEVIFGEL
FQLPSPPHIDVMYTALLIELCKLQPGSLPQVLAQATEMMYMRLDTMNTTCIDRLLNWFSH
HLSNFQFRWSWDDWADCLTQDIEKPKPKFVKEVLDKCMRLSYHQRIVDIVPPSFSALIPA
DPVCSYKYGEEADSSLPGLAMATTVGNAIKNRASNEEILIVLKDVPNPNQDDDDDGGDGF
NPLKIEVFLQTLLHLAAKSFSHSFSALAKFHEVLKTLTDSDEGKLHILRVLYEFWRNHPQ
MISVLVDKLIRTQIVDCAAVANWIFSPEMAHDFTRFYVWEILHSTIRKMNKHVQKIQKEL
DEAKVKLEKQHNKKVEKKSF
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggcgaaggcacagcgatgagagtgatgccggctcccagcctcacaaacggagg
aggacgtctgaacccattgagattgaagaccgcttggagtcgctgatatgtcgagtggga
gagaagagtacatcctccttagagagcaatttggaaggtcttgctggtgtcctggaggcg
gatcttcctaattataaaagcaaaatcctgcgcatcttatgtgctgttgcaaggcttttg
ccagagaagttagcggtgtacacaacactagtgggacttctcaacgctcgcaattacaac
tttggaggagagtttgtggaggccatgatccgacaacttaaggagacactaaaatcaaac
ctttactctgaggccgtttacttggtgcgctttctcagtgacctggtgaactgtcatgtc
atcgcggctccatccatggttgctatgtttgagaactttgtcagtgtcacgcaggaagaa
gacataccacaggtgcggtctgactggtatgtgtacgttgtgctgtccagtctgccttgg
gttggcaaggagctgtatgagaagaaggatgtggaaatggatcgcttgctcaaccaaatt
gagggatatttaaagcggcgtcagaagactcatgttcctatgctgcaggtgtggaccgca
gaaaagccccacccacaggaagagtatctggactgtctctgggctcaggtgcagaagctg
aagaaagaccgctggcaggagcgtcacatcctgcggccttatattgcatttgacagcgtg
ctgtgtgaagccctgcagcacaacctgccccctttcacacctccagcccactctgatgac
gctgtttaccccatgccccatgtcgtcttccgcatgttcgactacactgatgccccagag
gggcctgtgatgcctggaagtcattcagttgagcgctttgtgattgaggagaacctgcac
tgcataatcaagtctcactggagggagagaaagacctgtgctgcccaattgctcagctac
cctggaaaaaacaagattccccttaactaccatattgtggaggtgatatttggtgagtta
ttccagctgccgagtcctcctcacattgatgtcatgtacactgcgttactcattgagctc
tgcaaactgcaaccgggctctttaccacaagttcttgctcaagccacagaaatgatgtat
atgaggctggacacaatgaacacaacctgcatagaccgactcctcaactggttctcccat
catctgagtaacttccagttcagatggagctgggatgactgggctgactgcttgactcaa
gatattgaaaagcctaaacccaagttcgttaaagaggttttggataagtgtatgaggttg
tcgtatcatcagcggatagtggacattgttcctccgagtttctctgccctgatcccggct
gaccctgtgtgcagctataaatatggagaggaggctgacagttcattaccaggattagct
atggcaactacagtgggtaacgctatcaaaaaccgggcatctaatgaggagattcttatt
gttctaaaagatgtccctaatccaaaccaggatgatgatgatgacgggggcgatggcttc
aatcctctaaagattgaagtgttcctgcagacgctgctccatttggctgcgaagtctttc
agtcattccttcagtgccctggccaagttccatgaggttctgaagacccttacagacagc
gatgaggggaaactgcacatcctcagggttctgtatgagttctggaggaaccatcctcag
atgatctcagtgttggtggacaagctgatacggacccagattgtggactgtgcagctgtg
gccaactggatattttctcccgaaatggctcatgatttcaccaggttttatgtgtgggag
attctacattccaccatccggaaaatgaacaaacacgtgcagaagattcagaaagagttg
gatgaggcaaaagtaaagctggagaagcaacacaacaaaaaggtagagaaaaaatcattt
tga
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