Sinocyclocheilus grahami (golden-line barbel): 107587256
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Entry
107587256 CDS
T04918
Name
(RefSeq) protocadherin-16-like
KO
K16507
protocadherin-16/23
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sgh04515
]
107587256
Cell adhesion molecules [BR:
sgh04515
]
Cadherins
Cadherin related
107587256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
Cadherin_pro
RIFIN
Laminin_G_3
CADH_Y-type_LIR
TMEM154
Motif
Other DBs
NCBI-GeneID:
107587256
NCBI-ProteinID:
XP_016130463
LinkDB
All DBs
Position
Unknown
AA seq
3279 aa
AA seq
DB search
MNSKGRTIMDPLHQNRAWWWILVILYVVLQLMTIHSSMVPGTLQLQLDEEQPAGTVVGDI
SAGLPPDMTATHYFISDHQGTGVGTDLDIDESTGIIKTAKVLDREVRDRYSFIAVTITGI
TVEVTILVNDINDYAPVFPRKRGMFKIPEQTTIGTKFPLEPALDADEDQLTTQGYIITDG
NVGQAFLLETKRGSNKVLYLDLVVNAVLDRETRSSYTLLLEAFDGGSPKRTGQMILDLIV
QDINDNAPVFNQSRYHAVISENLQPGNNILQVFASDADEGDNGLVLYDINRRQSDPDRYF
VIDTRTGVITLNKPLDFEMRRVHELVVQARDNASQPEVTNAFVTIQVRDYNDNQPTMTII
FLSEDGSPRISEGVQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDSIIYLIC
VDQILDREEQDHYELRVLATDSGTPPLRAESSFTIQVTDVNDNPPLFDQPEYTQVIPEVA
FPGSFVVQVTARDKDQGPNGDVQYSILQNEETHSDWFSVDAVTGIVTTLTQLDYETDPMP
SVTVVAADRGRPPLSSTAVVKVILQDINDNEPVFGSKFYNASIKENTAAGTCFMEVTATD
ADGGSFGSISYSLGSGPGSVTPSQFTVGKHNGQICTTTSLDRDQGPTNYDFTVTAVDGGG
LSSVAYVRVDLIDINDNRPAFYPLNYAVSLSTQSTPGTSILKVTAHDPDTGDNGRVTYRT
VPGGSSPFFTLNKDTGVISLSRALHGKANSVITMVVSAQDGGGLTAPVNARVNISIVAGL
VAPPVFEQAQYFFMVSEDALRGTQVGVVRASTKNGVSKDISYTISSGDPTGYFTIDSETG
ALRTSLPLDHEAQPSLNLEVQAHCGNPPAFGQTRIRITVSDVNDNAPVFLPSSSESLILP
EDTRMGTVVYKVQAEDHDSGPNGLLSFDLFTGGAQRTFSIDRNSGQIRLIGSLSYETMPR
YDLQVIAKDSGAPQLSSTFTLVIHVQAENGQGPVFDSLTYRVELKESTPLNTRFLQVRAV
NRDGGITPGPSSTSSAPIAYHLHPDSDAAGFGIVSDSGWLFVKSALDREAKEMYLLTVLA
TSGNGQLKKTGSATVRVSVMDENDNTPRFIQERAFLAVRENLPAGTGFGRVSASDRDAGL
NGRLSYRLLHLNRHFQINSHTGEISTKLSLNRELQSSYQLMVVAQDGGNPPRSATGTAFI
AVLDENDNAPSFSHAGREVLLQALEGQPSGFLLGTIHAKDPDEGENGTIFYSMSGPRAER
FTLNPNTGELRSSSPLSHSERPEYNFIVLASDRGSPPQSSTITLKIEVVSSNKGSPTTNS
QPITLNSVEGAKPGSIVGSVRSPDSQTLPEVGQVTYTVVGGTDCDGTFVVDRQTGDVYLA
RELDFEKAPRYTLQIEVDDFSMPLPKSHFVTLVIDVQDSNDHAPKFPEDPIIIVVPENTD
PGSSIYTFQAIDKDGSGPNSEVHYSILQQWPNVPDLLFLDPTTGVLSLGMMLDHERTSSL
LLVVQAMDSAPDVGQRHRGTVTARIFVTDVNDNDPVFISPSVVSVMEDQPVGFVVVYVMA
ADADQGENGRVTYRIQSGNTGGKFSLNPDTGSLSILRPIDREEQDLYNLTIVAEDHGLHQ
HSSSQLLSIQVIDVNDEAPYFEESEYEAFIAENQPPGTTVLVVSASDLDQGTNGIVTYGS
IVGDDFSIHPVTGVITTTKALDREAQGVYAVTVYARDGGSLPNFAKTTVRVTVLDENDNR
PAFGRVYYSLEVPENQEPVTLFTVRATDQDSGDSGLVHYKITDGDHFGDFHLDRKSGVLS
TSRPLDRESKAKYTLTVEAQDQGIPSLTSTVTLDISVLDLNDNSPVFPSSSYSVEVSEDA
SEGSLVLEVSASDKDEGSNSQVVYFLSHESRGMFIVDQYTGRIITAAALDREKLASYSFK
VYAMDSSASNPRNTSAEVTVHILDVNDNAPFFITDPLIINVSSSSLSNHKVLATMRAEDK
DFGANGSVFYRFANPVKGFTINSLTGDIQATEKLHTMTQSQRTLIVEAMDQGNPSQSSLG
VVIVYIREQIYQGIRFARNTRDVSLQENAAKGTAVVQIQAHYPDGSRSGINYSIFSGNKQ
QSFSISPHTGEIWVESSKGLDFEETPRLRLVVKAETASSSTFMAVNLLLQDVNDNLPRFQ
LHNYVAYVREAQGYDHPIIQVLANDLDQGQNGQVTYSIRSSSMSGLFKIDPVTGSISTAA
IMDREIWTQTNLVIMATDRGSPRLAGSATLTVIIVDLNDNSPTIPVPREVRVPENTLIGT
VITQVTGNDVDSGPALSYSLLLDSDTQGKFGIHRYGGGVSLTASLDFEDRTWYMLTVSSS
DSKHRTYANLTVLVEDVNDNAPVFSQDLYEVTLAERSPAGSSVITVTATDKDSGDNGRIT
YRVVSTKDMFYIDPSNGTLFIKQKVEFDSQRLSILVVIEASDSGTPPLTALTTVQVHVSD
VNDNAPVFHQTEYRASVSEDEVPGSTILTLEAVDGDLSRDNCGFDFAIASGNIGNAFQIE
SSVRFLEGHGFQTVGMLILVDKLDFESANGYNLTIVVSDRGIPQRSSSVPVLITVMDTND
NPPSFSRAEYNVIVNEGAETGKEILQLFAVDPDSTSNGEVQYSISSGDESELFSIDRWTG
SLRLRRSLDSEKQSSRVFIIQASDGQGHFALAPVTVEVKNINNNRPYFPLKSLTASIREN
QPQNALVTILHAIDHDKGAYGELRYFLMYNSGNGKDSFLVNQTSGEVRTRFTFDFEKVNA
FNFIAIAMDAGNYSATVTVQVFVTGEDEYDPVFTNSDFAFHVPEGAKKGQSIGQVNANDE
DGGVDGIVLYTLANSSPYFEVNTSTGVISLKMDAYHRHTSRSKRETRQMTLDVTAHSPLE
ISRKASAQVTIDVTHTSFGLNTDMNVVLASAITASLAAIVFLIIVVVVIFLLRSQRYKEQ
EACARIVSHGTVLESLEESKVPGGDKLYHPTLPGYATDQTGSGGGTYARGGSLDPSHSSG
RGSAEAEAAEDDEIRMINEYPQVSSISSSMQEHIAARGPDSGIQQDADQLSDISCEPGMD
ANQWFKGKKLGSLSGTLPSSQLPTYRDEGGGYLGVGRGLKISHPKDYAFPEDGKPVVDGS
LTAIVASDEELRGSYNWDYLLDWCPQFQPLANVFTEIARLKDENAPPNPRRPFHPKAKTD
PKPRIDPPPLITSVAHPGAKTVLPKPAVGRTFPHLSSLRRSPIDRDGTVSSIAMSPSFSP
SLSPLAAHSPGIAPFGGHSSAIMGTNEHSLEHEETELRI
NT seq
9840 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtaaaggaaggacgattatggatccgttgcatcaaaacagggcttggtggtgg
atattggtgatcctctatgtggtgctacaactcatgaccatccactcatccatggtgcca
ggaacgttgcagctccagctagatgaggaacagccagcaggaactgtagtaggtgacatt
agtgctggcctcccacctgacatgactgcaacccattatttcatctcagatcatcagggt
acaggtgtcggcaccgatctggacatcgatgagagtacagggatcataaaaaccgcaaag
gtcttggaccgggaagtacgggaccgttacagcttcatagcagtcaccataaccggaata
accgtagaagtcaccatcttagttaatgacatcaacgactacgctccagtgttcccaaga
aaaagaggcatgtttaagattccagaacagacaaccattggcaccaagtttcctcttgag
cctgctttggatgcagatgaggaccagctcactacgcaaggctacatcataacggatgga
aatgtaggacaagcttttcttcttgaaaccaaacgaggatccaacaaagtgctctacttg
gatttggtagtcaatgcagttttggacagagagaccagatcttcgtacactctactcttg
gaagcatttgatggtggttcacccaagaggactggacaaatgatcctggatttgattgtg
caggacatcaatgacaacgccccagtcttcaaccagagtcgctaccatgcagtgatctca
gagaaccttcaacctgggaacaatatactgcaggtgtttgcttcagatgctgatgaaggt
gacaatgggttggtgctctacgacatcaacaggagacagagtgatcctgatcgctacttt
gtcattgacactcgaactggagttatcactctgaacaagcctttggatttcgagatgaga
agagttcacgagcttgtggtacaggctcgggacaatgccagtcaaccagaggtcaccaat
gcttttgtgaccatccaggtgcgagactacaatgacaaccagcccaccatgaccatcatc
ttcctcagtgaggatggttctccacgcatctctgaaggagtgcagcctggccagtacgtg
gcaaggatttcggtcacggaccctgattatggagaatatgccaatgtgaatgtgtctttg
gaagggggtgatggaaagtttgctttgaccaccaaagacagtatcatctatctcatctgc
gtagatcagatccttgatcgtgaagagcaagaccattatgaactcagagtcttggccaca
gattctggcactcctccattacgggcagagtcttcatttaccattcaggtcacggatgtt
aacgacaacccgcctttgtttgaccagccagaatacacccaggttattccagaggttgcc
tttccgggaagttttgttgtacaggttacagcacgggacaaagaccagggacccaacgga
gatgttcagtacagcatcctacagaatgaagaaactcattcagactggttcagtgttgac
gcagtcactggtatcgtcaccaccttgacccagcttgattacgaaacggaccctatgccg
agtgtaactgtggttgctgccgacaggggtcgaccacctttatcttctacagctgtggtc
aaagtgatcctacaggatattaatgataatgaacctgtgtttggcagcaagttctacaat
gcatccattaaggagaacaccgcagcagggacctgtttcatggaggttacagctactgat
gcggatggcggctcttttggctccatctcctactctctgggctctggtccaggcagtgtg
accccgtctcagttcaccgttggcaagcacaatggacagatctgtactaccaccagcctg
gatcgtgaccagggaccaaccaactacgacttcaccgtcacagctgtggatgggggtgga
ctgagttcagtggcctatgtgcgtgtggacctgatagacataaatgacaatcgaccagcg
ttctaccctctgaactatgcagtgagcctgagtacgcagagcaccccaggaacctccatc
ctgaaggtgactgctcacgatccagatactggagataacggcagagtgacatatcgtact
gtacctggagggagctcacctttcttcaccctcaacaaagataccggagtgatttcactg
tcgcgcgctctacatggaaaggcaaactcagtcattacgatggtggtctctgcccaagat
ggtgggggccttactgctccagtcaatgccagggtcaacatcagcatagtggcaggactg
gtcgccccccctgtgtttgagcaagctcagtacttcttcatggtctctgaggatgccctg
cgtggaacacaagttggtgttgtgcgggccagcactaagaacggtgtctcgaaggatatc
tcctacactattagttctggtgaccccacaggctacttcactattgattcggagactggg
gctttgagaacgagcttgcctctggatcacgaggcccaacccagcttgaatctggaagtc
caggcgcactgtggtaaccccccggcctttggccagactaggatacgaattacagtgtct
gacgtcaacgacaatgcgcccgtcttcttgccctcatcttcagagtcactgattctacct
gaagacacccggatgggtacagtggtgtataaggtccaagcagaagatcatgattctgga
cccaatggtcttctgagttttgacctgttcaccggcggtgcccagagaaccttcagcatt
gatcgcaacagtggacaaatccgcctgattggcagtttgtcgtacgagaccatgcctcgc
tatgacctgcaggtgattgctaaagatagcggagcacctcagctaagttctaccttcacc
ctggtcatccacgtgcaagcagagaatggccaaggccccgtgttcgatagtctcacgtac
cgagtagaactgaaggaaagcacacctctcaacactcgcttcctgcaggtacgagctgta
aaccgagatggtggcatcacccctgggccgtcttctacgtcttctgccccaatagcctac
cacctgcacccagacagtgatgctgcagggtttggcattgtgtctgacagcggctggctg
ttcgtgaaaagtgcgctggacagagaagccaaggagatgtacctgctcactgtactggcc
acatcaggcaacggacagctgaagaagacgggtagcgctacagtgcgcgtgtcagtgatg
gatgaaaatgacaacacccctcggtttatccaagagagagcgttcctggcagtgcgcgag
aacttgccggcaggcactggcttcggccgggtgtctgccagcgatcgggatgctggtctc
aacggtcggctgagctaccgcctgctccatctgaatcgccacttccaaatcaactcccac
acaggtgagataagcacaaaactttccctcaaccgtgaacttcagtccagctaccagctc
atggtggtggctcaggatggagggaaccctccccgcagtgctacaggcactgctttcatc
gcggttctggatgagaatgataatgcgccctccttcagccatgcaggaagagaggtcttg
ctgcaggcgttagaaggtcagccatctggatttcttctgggaaccattcatgcaaaagac
cctgatgaaggagaaaatggaactattttctactccatgtctggtcccagagccgaacgt
ttcacactgaacccaaacaccggagagctgcgctcctcttcccctttgagccattcagag
cgtcctgagtataatttcatcgttctggcttcggaccgaggttcaccccctcagagctcc
accataacattgaaaattgaggttgtaagctcaaataaaggatcacccaccactaactcc
caaccaataacgttgaattcagtagagggagctaaacccggctcaatcgtgggatctgtt
cgttcacctgattctcagactcttcctgaagtaggccaggtcacgtatactgtggtggga
ggcaccgactgcgacggcacctttgtggtagaccgccagacgggtgatgtttacctggcc
cgtgagcttgatttcgaaaaagctcctcgatacactctccagattgaggttgatgacttc
tccatgcctctccctaaaagtcactttgttacgttggtaatcgatgtccaggacagcaac
gatcatgctcccaagtttcccgaagaccccattatcatagtcgtccctgagaacaccgat
cctggatcatctatctacaccttccaggccattgataaagacggaagcggacccaacagt
gaagtacactactccatcctgcagcagtggccaaacgttccagatctcctgttcctggat
ccaaccacaggagttctttctctgggaatgatgttggatcatgagaggacctcttcacta
ctcttggtggttcaggcgatggattcggcccccgatgtcggtcagcggcaccgtgggacg
gtcacagcccgcatatttgtcactgacgtgaatgataacgaccctgtgttcatctcaccg
tctgtggtgagtgtgatggaggaccagcctgtgggctttgtcgtggtctatgtcatggct
gcagatgcagaccagggagagaacggacgtgtgacgtatcgtatccagagcggcaacact
ggaggaaaattcagccttaacccagatacagggtctttgtctattcttagaccaattgac
cgtgaagagcaagacctctacaacctgaccatagtggcagaagaccacggtttacatcag
cacagcagctcccagttactgtcaatccaggtgattgacgtaaatgatgaggcgccatac
tttgaggaaagtgaatatgaagcttttattgcagagaatcagcctccaggaactactgtg
cttgtggtttcagcttctgatttggaccaagggaccaatggaattgtgacatatggaagt
attgtaggagatgatttcagtattcatccggtgacaggagtcataacaaccaccaaggct
ttggacagggaagcccaaggggtttatgctgtgacagtttatgccagagatggtggttct
ctgcccaattttgccaagaccacagtgcgcgtcacagtgctggatgagaatgacaataga
ccggcttttgggagagtgtactatagtctggaggtacctgagaaccaggagcctgtgacg
ctcttcaccgttagagccacagatcaagactccggggacagtgggctggtgcactacaaa
atcactgacggagaccattttggtgatttccacctggacaggaaatcaggtgtgttgtcc
acttccaggcctttggaccgagagtccaaagcaaagtacaccctcaccgtggaggcacaa
gatcaaggaataccatccctcaccagcactgtcactttggacatcagtgtcttggacctg
aatgacaacagcccagtgttccccagcagtagctactcagtggaggtatcagaagatgca
tcagaagggtctcttgttctggaggtttcagcctctgacaaagacgaagggtccaacagt
caggttgtctacttcctgagccacgaatccagaggtatgttcattgtggaccaatacaca
ggccgcattattacagcagcagccctcgaccgagaaaaattggcctcctacagtttcaaa
gtctacgccatggactcctcagcctccaacccccgtaacacctctgctgaagtcaccgtc
cacatcttagatgtaaacgacaacgcccccttcttcatcacagacccgctcatcatcaat
gtgtccagcagtagtctctccaaccacaaggtgctggccaccatgagagctgaagataaa
gactttggtgcaaatggatctgtattttatcggtttgcgaatcctgtcaaaggcttcacc
ataaactccttgactggggacatccaggccaccgaaaagctccacacgatgacccagagc
cagcggaccctcattgtggaggccatggatcagggtaacccatcgcagtcctctctggga
gttgtgatcgtgtacatcagagagcagatttaccagggcatccgcttcgctcgcaacacc
agggatgtcagcctgcaggagaatgctgctaaaggtacagcagttgttcagatacaggct
cactatcctgatggatctaggagtggcatcaactacagcattttcagtggcaacaagcag
cagtcctttagcatcagcccccacacaggtgagatttgggtagaaagctccaaaggtctg
gactttgaggagaccccacgactccgcctggtggtcaaggctgaaaccgcatcctccagt
accttcatggcagttaaccttctcctacaggatgtcaatgacaatttaccacgctttcaa
cttcacaattacgttgcttatgttcgtgaggcccagggctatgatcatcctatcattcag
gtgttggcgaatgacctggaccagggtcagaatgggcaggtgacctactccataaggtca
tcgtccatgagcggcctcttcaagatcgaccctgtcacaggcagtatatccaccgctgcc
atcatggacagagagatctggacacagaccaacctggttattatggcaacggacagaggt
agtcctcggttagcaggttctgccactctcactgtgatcatcgtagacctgaatgacaac
agtcccaccatccctgttccacgtgaagtccgggtccctgagaataccttgattggaacc
gtgatcactcaggtcacagggaatgatgtggactctgggccggctctctcctattccctg
cttctggactcagacactcaaggaaagtttggaatacatcgctatggaggcggggtgtct
ttgactgcctctctggactttgaagatagaacatggtacatgctgactgtcagctcctct
gactccaaacaccggacttacgcaaatctgaccgtgcttgtggaggatgtgaatgataat
gctccagtcttctcccaggacctttatgaggtgactctagcagaacgctcgccagcagga
agctcagttatcacagtaactgctacagataaggactccggagacaacggaaggataaca
tacagggttgtgtcaacaaaagacatgttctacattgacccaagcaatggtactctgttc
atcaagcagaaggttgagtttgactcacagcgcctttccattttggtggtgattgaagcc
agtgatagtggaacacctccgttgactgcccttaccacagttcaggtgcatgtgtctgat
gtcaatgacaatgcccctgtattccaccagactgagtacagagcctctgtatctgaagat
gaagttcctggttcaaccatcctaaccctggaagcagtggatggggacttatctagggac
aactgcgggtttgatttcgccattgccagtggaaacattggtaatgccttccaaatcgag
agcagtgttcgtttccttgagggccatggatttcagacagttggaatgctgatattagtt
gataagcttgactttgagagtgcgaatggctacaatctcacaattgtggtctcagatcgc
ggcataccacaacgaagctcaagtgttccagttttaatcactgtaatggacaccaatgat
aaccctccatccttcagtagggctgagtacaacgttattgtcaatgaaggggcagaaacg
ggaaaagaaatacttcaactttttgcagtagaccctgactcaacatctaatggagaggtt
caatactcaatcagttctggagacgagtctgagctcttttctattgatcgctggactggg
tcccttcgtctgcggaggtctcttgatagtgagaagcagtcctctcgtgtgttcatcatt
caggcctcagacggtcagggccacttcgctcttgctcctgtaactgtcgaggtcaagaac
atcaataataacaggccttacttccctcttaaatcactcacagcaagcattcgtgaaaac
cagccccaaaatgctctagttaccatactacatgccattgatcatgacaaaggagcatat
ggagaattgagatatttcctcatgtataattccggcaacggtaaagattccttcctagtg
aaccaaacctccggtgaggtgcgaacccgctttacattcgacttcgagaaagtaaacgct
ttcaattttattgctatcgcaatggatgcaggcaactactcggccacagtcacagttcaa
gtctttgtgactggtgaagatgagtacgacccggttttcactaactcagatttcgccttc
catgtacctgagggtgccaagaaagggcaaagcatcgggcaagtaaatgctaatgatgag
gatggaggggtggacggcattgtcctatacacactcgcaaacagttcgccttactttgag
gtcaacacgtctacaggagtgatatccctcaagatggatgcatatcatcgacatacaagc
cggtccaaaagagagacacgtcagatgacattggatgttactgctcacagtcctttggag
atttcccgaaaagcttctgcccaggtcacaattgatgtcactcatacatccttcggcttg
aacacagacatgaatgtggtacttgccagtgctataacagcttccttggcagccattgtg
ttcctgatcatagttgttgtggtgatattcctcttaagatcccaaaggtacaaagaacaa
gaggcctgtgccagaatagtatcccacggtaccgttctggagagtcttgaagaatcgaaa
gtaccagggggtgataagctgtatcatccgactcttcctgggtatgcaacagaccaaact
gggagtggaggaggtacctacgcacgaggtgggtctcttgacccatctcactccagtgga
cgtggttctgccgaagcggaagcagcagaagatgatgagatccggatgattaatgagtat
cctcaagtttccagcatctcctcctccatgcaggagcacatagctgctcgtgggcccgat
tctggtatccagcaagatgcagaccagctatctgacatttcctgtgagccggggatggat
gcaaatcaatggtttaaagggaaaaaactgggaagtttaagtgggacactaccatcaagc
cagttgccaacttatcgggatgaaggaggtggttatcttggggttggaagagggcttaaa
atctcgcatccgaaagattatgctttcccggaggatggtaagcctgttgtagatggttct
cttacagctattgtggctagtgatgaggaactgaggggaagctacaactgggactacctc
ctcgattggtgccctcaatttcagcctctggctaatgtctttacagaaattgccagattg
aaagatgagaatgcgccacctaaccctcggcggccgtttcatcccaaagcaaagacagat
cccaagcccagaattgaccctcctccccttattacctctgtagcacatccaggggccaaa
acggttttgccgaaacctgctgtaggccgaacatttccacacctgtcctcattgcgccga
tctcccattgaccgtgatggcactgtttcctcaatagccatgtctccgagtttttctcca
tcactttcgccacttgctgcccattccccaggcattgctccctttggaggtcactcgtcc
gccattatgggtacaaatgagcactccttagaacatgaggagacagaactgaggatttaa
DBGET
integrated database retrieval system
