Sinocyclocheilus grahami (golden-line barbel): 107587427
Help
Entry
107587427 CDS
T04918
Name
(RefSeq) probable voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107587427
04020 Calcium signaling pathway
107587427
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107587427
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107587427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
107587427
NCBI-ProteinID:
XP_016130712
LinkDB
All DBs
Position
Unknown
AA seq
2340 aa
AA seq
DB search
MSKRLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLHNGWNVMDFVVVLTGILTVVGPD
FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFY
MGKFHHTCFRNDTGEQAADFPCGMEPPARTCEGDTVCREYWTGPNFGITNFDNILFAVLT
VFQCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERV
EKRQEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKEDGAWYKRKCNNPVLK
RAKKSKNDLINAEEGEDHFTDISSVAPQGSPFTRTSLKSSKNESSSYFRRKAKRFRFFIR
RMVKAQSFYWTVLCIVGLNTLCVAIVHYDQPNWLTYALYLAEFVFLGLFLIEMSLKMYGL
GPRTYFHSSFNCFDFGVIVGSIFEVIWAAVKPGASYGISVLRALHTLLNVFLAIAVDNLA
NAQELTKDEEEQEEAISKKLALQKAKEVKEVSPMSAANISITAFIRPNPGALSCSSSNSS
SHSPKEQQRSLKMMSVWEQRTTQIRKHIRASSEALYQEELNPRLTSNLHLRPDMKTHLDR
PLVVEPRCDGPISPHRGWDKPQNLQGEGGTLEERVPPVMEPPQSHQPHKHHRHRDRPSNE
TNENGDTGHGKEGWHHVHHSRSKEQDGTRCKEGKSDRSRSREGGRRHHHQSSVDEGGGER
EHRHHHSHRHNREGNGVVSAGGKSERRSRQKDGSRSGTREGERCSRGENGGNGGRTQHRL
RTSKAQSTLEGEEQQGNEEKEEGKSHSHRHMDMGGDSLAVNPHQPSVGSRWCLEKPEDLD
NKLNIGQTGGMGTHIPVTITSPPGETTLIPMNSIDSETMPMTEKNLEDLNQSSPRPVLPF
SSMFIFSPTNPVRRLCHYIVSLRYFEMCILVVISMSSIALAAEDPVQANAPRNNVLKYLD
YVFTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNILDFIVVSGALVAFTFSSFMGSHQSVN
RGTKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIF
AVIAVQLFKGKFFYCTDESKGLEKYCRGLFLDYDKDEVAAQPREWRKYEFHYDNVLWAFL
TLFTVSTGEGWPTVLKHSVDATFEDQGPNPGYRMEMSIFYVVYFVVFPFFFVNIFVALII
ITFQEQGDKAMSECSLEKNERACIDFAINAKPLTRYMPQNQQSFQYRLWKFVVSPPFEYS
IMIMIALNTVVLMMKFHGAPDFYEAMLKYLNIVFTALFSMECILKIIAFGPLNYLKDAWN
VFDFVTVLGSITDILVTEINERLLNLSFLRLFRAARLVKLLRQGYTIRILLWTFVQSFKA
LPYVCLLIAMLFFIYAIIGMQVFGNIELSDDTAINRHNNFRTFLQALMLLFRSATGEAWH
EIMLSCLSERTCDASSGIHGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTR
DSSILGPHHLDEFIRVWAEYDPAACGRIKYLDMYEMLLHMSPPLGLGKKCPPRIAYKRLV
KMNMPIADDNSVHFTSTLMALIRTALEIKLASGMVAQRLSDAELKKELTTVWPNLSQKTM
DLLVTPHKPNELTVGKVYAALMIFDYYKQNRAKRLQMQQQQQREQAGLGSQNKVSALLEP
ILPLTHMQDQAMNSVDSASEFQAQTRPSSTMLNNGRTHLDNTIKGSSSWASEKSKEVQRS
KRRPMSRGQSEDASNANTVQESVEMRKMENSANTVTSGGFAAQGRAVSMPKLNAEMQHLL
YLSECLALGMVAQRLSDAELKKELTTVWPNLSQKTMDLLVTPHKPNELTVGKVYAALMIF
DYYKQNRAKRLQMQQQQQREQAGLGSQNKVSALLEPILPLTHMQDQAMNSVDSASEFQAQ
TRPSSTMLNNGRTHLDNTIKGSSSWASEKSKEVQRSKRRPMSRGQSEDASNANTVQESVE
MRKMENSANTVTSGGFEGQGRAVSMPKLNAEMQRSHSRHSPGTLLEPIPDSPMRRSASTF
APQRPQEVNLNDYTLVKPVQERHHHHHHHHRCHHRRDRDKKQRSLDRSPTGQHKATGTAA
DLVEERTHDRGRSHERKHHSSSAEKQRYYSCDRYGSQEHCPSKSAVASCATSPSEAQEAS
LNKQGSGWAKGSPVLLTSGASTPSHGRRQLPQTPLTPRPSVAYRTANSSPVQFLGTQAGL
LPSSPGRLSRGLSEHNSLLHSGSISSSQAPVSRINSEPFLGPPDHPAVLQPEAYAVFQED
LSPQMGRSPQTIGMPIVAIPPPPQQQFRGLPNGYHFTMGPGASRGRARQYYPEAEVDDWC
NT seq
7023 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgactggatgacactgaaccctacttcattggaatattttgcttcgaggcc
gggatcaagatcatcgctctaggctttgcttttcataaaggctcctacctccacaatggg
tggaatgtaatggattttgttgttgtgttgacggggattctgactgtagtggggccagac
tttgatttgcggacactcagggcagtaagagtcttgcggccactcaaactggtgtctgga
attccaagtctccaagtggttctgaagtccatcatgaaagcaatggttcctctgcttcag
attggccttctgctcttttttgctatcctcatgtttgccatcattggtctagacttttac
atgggcaagtttcaccacacctgcttcagaaacgatactggggaacaggcagctgacttt
ccatgtgggatggaacctccagcccggacgtgtgaaggcgacactgtttgtagggaatac
tggaccggtccaaacttcggcataacaaactttgacaacatcctgtttgctgtgctcacc
gtcttccagtgcatcactatggaaggatgggtggacatcctttacaatgccaatgatgcc
tcagggaacacctggaactggctctacttcatcccactcatcatcatcggctcttttttc
atgctcaacttggttttgggggtgctgtcaggggagtttgcaaaggagcgagagcgtgtg
gagaaaaggcaggagttcctgaagcttcgcagacaacagcagatcgagagggagctgacc
ggctacctggagtggatctgcaaggcagaggaagtaatgcttgctgaagaagataaaaat
gcagaggagaaggaggatggtgcctggtacaagaggaaatgcaacaacccagtattgaag
agagccaagaagagcaaaaatgacctcatcaatgcagaggaaggagaagaccacttcact
gacatctcatcagtcgctccccagggctctccattcacccgtacaagcctgaagagcagc
aagaacgagagctcatcatactttcgcagaaaagcgaagaggtttcgcttcttcatccgc
cgtatggtgaaggcccagagcttctactggactgttctgtgtatagtgggactgaacaca
ctgtgtgtggctatagttcactacgaccagcccaactggctcacatatgcactgtatttg
gcggagtttgtattccttggtctgtttctaatagaaatgagtctgaagatgtatggcctt
gggcccaggacctactttcactcctcatttaactgctttgactttggggtgattgtgggt
agcatttttgaggtgatttgggcagcagtaaaaccaggagcctcttatggcattagtgtg
ttgcgagcactacacaccctcctcaatgtctttttggccatcgctgttgataatcttgcc
aatgcacaagaactcaccaaggatgaggaggagcaggaggaggccatcagtaagaaactg
gctctgcagaaagccaaggaggtaaaggaggtcagccccatgtcggccgctaacatttcc
atcacagcttttataaggccaaatcctggtgctctttcatgcagctcctccaactccagc
tctcattcacctaaagaacagcagcgttctctaaaaatgatgtccgtatgggagcagcgc
accacgcagattcggaagcacatacgggccagcagtgaggcattgtaccaagaagagctc
aaccctcggctgacctctaaccttcacctccgccctgacatgaaaacccacctggaccgg
cctctggtggtggaacctcgttgtgatggtcccatcagtccccacagaggctgggacaaa
ccccagaatttgcaaggggagggcggcacactggaggaacgagtcccccctgtgatggag
cccccacagtcacaccaaccacacaagcaccaccgtcacagggatcgtccctccaatgag
accaatgaaaatggtgacacgggtcatggcaaagaaggctggcatcacgtccatcacagc
cgcagtaaggagcaagatgggacacggtgtaaggaggggaagagtgacaggagccggagc
agagaggggggccgcagacatcaccaccagagctcagtggatgagggtggtggggagaga
gaacatcgtcaccatcactcccacaggcataacagagagggcaacggagtggtcagtgct
ggggggaagagcgaacggcggtccaggcagaaggatggctcacgttcgggaacaagggag
ggagagaggtgctccaggggcgaaaatggaggtaatggagggaggacacagcacagacta
cgtaccagtaaagctcagtccacgctggaaggagaggagcaacaagggaatgaagagaag
gaggagggcaagtcgcacagccacagacacatggacatgggaggagattcactggctgta
aacccccatcaaccttcagttgggagccgatggtgtcttgagaagccagaagacttggac
aataaactaaatattggtcagactggaggaatgggcacacacatacctgtgaccatcaca
tctccccctggggaaacaacccttattcccatgaacagtatagacagtgagacgatgccc
atgactgagaagaatctggaggatctgaaccagagcagccctcgtcctgtccttcccttc
agctccatgttcatcttcagcccaaccaatccggtgagacgtctgtgccactacattgtg
agtctgcgctactttgagatgtgtatcctggtggtgatttccatgagcagtatagccctg
gctgcggaggacccagtccaagccaatgcccctcgtaacaatgtcctgaagtatttggac
tatgtcttcactggtgttttcacttttgagatggtcattaagatggtggatttaggttta
ttgctgcatcctggttcgtacttcagagatctgtggaatattctggatttcattgtggtc
agtggtgcactggtggcattcacattctcgagcttcatgggatcacatcaaagcgtaaac
agaggaaccaagggcaaagacatcagcactatcaagtccctgagggtgttgcgagtcttg
cgaccactgaagaccattaaacgtctaccgaaactgaaggccgtgtttgactgcgtggtg
aactccctgaagaacgtgttgaatatcctcattgtctacatcctgttcatgttcatcttt
gctgtcattgctgtgcagctcttcaagggcaagtttttctactgcacagacgagtccaaa
ggcctggagaaatactgcagagggctgttcttggattatgataaggatgaagtagcagcc
cagcccagggagtggaggaaatatgagttccactacgacaatgtgctgtgggcgtttctc
actctcttcactgtttctactggagagggctggccaacggttttgaagcattctgtagat
gccacttttgaggaccagggtcccaatccgggctaccgcatggagatgtccatcttctac
gtggtctactttgtggtcttccccttcttctttgtcaacattttcgtggccttgataatt
atcacattccaggaacagggcgacaaggccatgtcagagtgcagtctggagaagaatgag
agagcctgcattgactttgctatcaatgccaaaccgttgacccgctatatgccacagaac
cagcagtcctttcagtaccgcttgtggaagtttgtggtttctccaccctttgagtactcc
atcatgatcatgattgctctcaacactgtggtactcatgatgaagttccatggggctcct
gacttttatgaagcaatgctcaagtatctcaacattgttttcactgctctcttttcaatg
gagtgtattctcaagattattgctttcggccccttgaattacctgaaagatgcctggaat
gtgtttgactttgtgactgtgctgggcagcatcactgacatcttagttactgagattaac
gaacgtctgctgaacttgagtttcctgaggctcttcagagcagccagactcgtcaaactc
ctccggcagggatacaccattcgcatcctgctctggacattcgtccaatcttttaaggca
ctgccttatgtttgcctcctaattgccatgctgtttttcatctacgccatcattggaatg
caggtgtttgggaacattgagttgagtgatgataccgccataaatcgccacaacaacttt
cgcactttcctccaagcgcttatgctgttgttcaggagtgctactggtgaagcctggcat
gagattatgctgtcctgtctgagtgagcgcacgtgtgatgcaagctcaggcattcatgga
aaggagtgcgggagtgactttgcctacttctactttgtctcctttattttcctctgttct
ttcctgatgttgaacctgtttgtggctgtcattatggacaactttgaatatctgacacgt
gattcctccatcttgggccctcaccacctggatgagtttatccgagtgtgggcagagtat
gacccagccgcatgtggccgtatcaagtacctcgatatgtatgagatgctgctccacatg
tccccacctttaggtttgggaaagaaatgccctccacgaatcgcctacaagcggctggtg
aaaatgaacatgcccattgcagatgacaacagtgtgcacttcacctctactttgatggct
ctgatccgcactgccctagagatcaaactggcatcaggcatggtggcccaacgtctgtca
gacgctgaactgaagaaggagctcactacagtctggccaaacctgtctcagaagactatg
gacctgctggtcactccacacaaacccaatgagcttacagtggggaaggtatatgcggct
cttatgatttttgactattacaagcaaaacagagccaaaagacttcaaatgcagcaacag
cagcagagagaacaggcaggacttggatctcagaataaagtcagtgctcttttagagcct
attctcccactaacccacatgcaagatcaggccatgaacagtgtagattcagcctcagag
tttcaagctcagaccagacccagctccaccatgctcaacaacggacgcacacatcttgac
aacacaataaaaggatcttcatcctgggcctcagagaagtccaaggaggtgcagcggtct
aaacggcggccaatgtccagaggtcaatcagaggatgcctcaaatgcgaacactgtccag
gaatcagtagaaatgaggaagatggagaacagtgccaacacagtgacctctggcggcttt
gcggcccaaggacgtgcagtatccatgccaaaactcaacgcagagatgcagcatctgttg
tatctctctgagtgtttggcactgggcatggtggcccaacgtctgtcagacgctgaactg
aagaaggagctcactacagtctggccaaacctgtctcagaagactatggacctgctggtc
actccacacaaacccaatgagcttacagtggggaaggtatatgcggctcttatgattttt
gactattacaagcaaaacagagccaaaagacttcaaatgcagcaacagcagcagagagaa
caggcaggacttggatctcagaataaagtcagtgctcttttagagcctattctcccacta
acccacatgcaagatcaggccatgaacagtgtagattcagcctcagagtttcaagctcag
accagacccagctccaccatgctcaacaacggacgcacacatcttgacaacacaataaaa
ggatcttcatcctgggcctcagagaagtccaaggaggtgcagcggtctaaacggcggcca
atgtccagaggtcaatcagaggatgcctcaaatgcgaacactgtccaggaatcagtagaa
atgaggaagatggagaacagtgccaacacagtgacctctggcggctttgaaggccaagga
cgtgcagtatccatgccaaaactcaacgcagagatgcagaggagtcattcccgtcattct
cctgggactttactggaacccattcctgattcccccatgagacgctccgcatccactttt
gcaccacagcgccctcaggaggtgaatctgaatgactacactttggtgaaacctgttcaa
gaacgacatcaccaccatcaccatcatcaccgatgccatcatcgtagggacagagacaag
aaacagagatctctggacaggtcgcccactggccaacacaaagctacaggcacagccgct
gaccttgtagaggagaggacgcatgaccgaggtcgttcccacgagaggaagcatcattca
tcttcggcggagaagcagcggtattactcatgtgatcgctatggcagtcaggaacactgt
cccagcaagtctgccgtggcaagctgtgccacttcgcctagcgaggcccaggaggccagt
ctcaacaagcagggcagtgggtgggctaaggggagcccggtgttgttgacctcaggggcg
agcactccaagccatgggcgcagacagctgccccagaccccccttactcctcgtccctct
gtggcctacaggactgccaactcctcccctgtgcagtttctgggcacacaggccggcttg
cttccctcgagtcccggcaggctgagccgcggtctgtccgagcacaactccctcttacac
agcggctccatctccagctcgcaggcccccgtcagtcgcattaactcagaacccttcctt
gggcccccggaccaccctgccgtcctccaacccgaagcctacgctgtcttccaagaggat
ctgagccctcagatgggccgttctccccagactatagggatgccgatcgtggcgattccc
ccacctccccaacagcagttccgtgggcttcccaatggataccactttaccatgggcccc
ggcgccagcagaggacgggcacggcagtactacccagaggcagaggtggacgactggtgc
tag
DBGET
integrated database retrieval system
