Sinocyclocheilus grahami (golden-line barbel): 107587702
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Entry
107587702 CDS
T04918
Name
(RefSeq) retinoic acid receptor RXR-alpha-B-like
KO
K08524
retinoid X receptor alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03320
PPAR signaling pathway
sgh04148
Efferocytosis
sgh04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107587702
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
107587702
03320 PPAR signaling pathway
107587702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107587702
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sgh03310
]
107587702
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
107587702
Nuclear receptors [BR:
sgh03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
107587702
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
107587702
NCBI-ProteinID:
XP_016131072
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
METKPFLSLGLLKNPCSVAPPCLRSWPGDAGSSPNGYSGFTGTYPLQQRRISTDFSGQLS
LSPLSSSTGHRGISNHPLHPPLLGQSAMSSSPGQLRSPISTLSSPINGLPSPFPVISTPM
GHPSMSGPSSTSMTFRPSLSPQVRQHCIYCGLSKHYGVYSCEGCKGFFKRTVRKDLTYTC
RDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRAKEQSEGEFGSCANEDMPVE
KILEAELAVEPKTETYVEANLSVPANSPNDPVTNICQAADKQLFTLVEWAKQIPHFSDLP
LDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHTAGVGAIFDRVLTEL
VSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPSEVEALRERVYASLEAYCKHKYPDQPG
RFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaaccattcttgtctctagggctcctgaaaaacccctgctcagtagcgccg
ccgtgtttgcggagctggccgggcgacgctggcagttcgcccaatggctactccggcttc
acgggtacatacccgctacaacagcgcaggatatccacagacttctccggtcagctctcg
ttgtctcctctgagctcctccacgggtcaccgaggcatcagtaaccatcctctccacccg
cccctgctcggccagtccgccatgagctccagcccgggtcagctgcgctcgcccatcagc
accctcagctcgcccatcaacggcctgccctcgccgttccccgtcatcagcacgcccatg
ggccatccttccatgagcggcccgtcctccaccagcatgaccttcagacccagcctgagc
ccacaggtaagacagcactgcatttactgtggacttagtaaacactatggggtgtacagc
tgtgagggctgtaagggcttcttcaagagaacggtgagaaaggatttgacgtacacttgc
cgagacaacaaggactgtttaattgacaaacgccaacgcaaccgctgccagtactgccgt
tatcagaagtgcttagccatgggaatgaagagagaagccgttcaggaggagcggcagcgg
gcgaaggagcagagtgagggtgagttcggcagctgtgccaacgaagacatgcccgtggag
aagattctggaagccgaactggcagtggaaccaaagacggagacctacgtggaggccaac
ctgagtgtgcctgccaattctcctaatgaccctgtaacaaacatctgccaagcagctgac
aagcagctctttaccttagtggagtgggccaagcagatacctcacttttctgatctccca
ctggacgatcaagtcatcctcctgcgagcagggtggaatgaactcctgatcgcctctttt
tcgcatcgttccatagctgtgaaagatgggatattattagcaacaggccttcacgtccac
agaaacagcgcacatactgccggtgttggagccatctttgacagagtgctgacagagctt
gtgtcaaagatgagagacatgcaaatggacaagactgaacttggatgcttgcgggccatt
gttctgttcaatccagattcaaaaggactgtctaatccatcagaggtggaggctttaagg
gaaagagtgtatgcatctctagaggcctactgtaaacacaaataccccgatcagcctggg
agatttgccaagctgttactgcgtctgcctgccctgcgctccatcggtctgaaatgtctt
gaacatctcttctttttcaagttaatcggagacacgcccatcgacactttcctaatggaa
atgctggaagcgccacaccaaatgacataa
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