Sinocyclocheilus grahami (golden-line barbel): 107588061
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Entry
107588061 CDS
T04918
Name
(RefSeq) vascular cell adhesion protein 1-like
KO
K06527
vascular cell adhesion molecule 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107588061
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sgh04515
]
107588061
04090 CD molecules [BR:
sgh04090
]
107588061
04091 Lectins [BR:
sgh04091
]
107588061
Cell adhesion molecules [BR:
sgh04515
]
Immunoglobulin superfamily
VCAM
107588061
CD molecules [BR:
sgh04090
]
Proteins
107588061
Lectins [BR:
sgh04091
]
I-type lectins (Siglecs)
107588061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
ICAM_N
Izumo-Ig
C2-set_2
ICAM1_3_5_D2
C1-set
Motif
Other DBs
NCBI-GeneID:
107588061
NCBI-ProteinID:
XP_016131550
UniProt:
A0A672QDV3
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MNSALLLTLLLPAAVISHVLDLPSKVLFKVGDRRELTCSMSSCPEKVKFVWTSLEDRPIF
AAIDSQDRESVLVFDNVMKNHENTIVCKATCEQETKQATTKIKVYSFPRNPVISGYDSLK
LGEENVLGCEVSSIHPSEFLKVQWLYEDKVLQTDEAEPERNAFSVHYIFTPSSEDDGKAI
TCRASLDVYGIPPDEMTKETLAHMTVLSAPHNVKVSGVNVVPLGSSLTLTCEAEGKPKPA
FTWTALIPGGQSVEMGKHHDLLVHNVSLSDAGTYQCDVRNDFGSQRENVSVVVQAPPMDT
LIVASPQSILKEGDSVSFSCKSSGVPVTHVVLSRRVNGVKTELMSSEGAETSVALLSVKL
ADSGMFVCEAFNEYGRQETTLNLTVEAHLLEVALQPDGEVVLERGSSLVLSCQASGCPQP
EFSWKNLSNMPILRRLKTDGFQSQLFFDLVELDDEGTYLCDVTCGSIKKSKQTEVKVFSF
PSPVVKNSGPSLVGEIMKLTCTVQEVFPANLFQILWMDGEREMHSETGSFSRGTTNLTSV
YSYHVDTEDQDKHITCKVLLEMHGVPAVQAVKTASTTLSIHYPPRVTRITVSPLTELKEG
ESVSISCLSDSFPVGRTVLSRVEDGIQTELMASDGLETLFTIPSVELDDSGIYICETSNM
YGSHNDSVEITIKAPPRNMTVEIFPSTDVQEGQNITICCRSVSFPPPAVVLSKLDSEKNV
YSLDGVFLLINLTANDTGLYQVNVTNYLGYETEIFNINVMEKRVNPPFGWNYFLIPAICL
GVAAALLGVVVYVWSARKKGSYDLTKCNPSTV
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagctttactgttgactttgcttctaccagctgcagttatttcccatgtactg
gacctgccgtccaaagttctgttcaaagtgggcgacaggagagagttgacttgcagcatg
tcatcttgcccagagaaggtgaagtttgtttggacctcattagaagacagaccgatattc
gctgctattgattcacaggacagagaatctgtgctggtctttgacaacgtgatgaagaat
cacgaaaacaccatagtgtgcaaagcaacctgtgaacaggagacaaaacaggcgacaaca
aagattaaagtttattcttttccaagaaaccccgttatatccggatatgatagcttgaaa
ctgggcgaggaaaatgtcttgggctgtgaagtgtcttctatacacccttcagagtttctt
aaagtgcagtggctctatgaagacaaagttcttcagactgatgaggcagaacctgagaga
aatgcattttcagttcattacatattcacaccttcaagtgaggatgatgggaaggcgata
acatgcagagcatccctcgatgtgtatggtataccacctgatgagatgaccaaggagaca
ttagcacacatgacagttctctctgcaccgcataacgttaaagtatctggagtgaatgtt
gtcccactgggatccagtttaactttgacctgtgaggccgaaggcaaaccaaagcctgcg
tttacatggacggctcttataccaggtggccagtctgtggaaatgggaaaacatcatgat
ctcctcgtacataacgtgtccttatcagatgctggtacttaccagtgtgatgttagaaat
gactttggaagccaaagagaaaacgtttcagtagtcgttcaagcacctcctatggatact
ctcattgtagcaagtccacaatccattctgaaggaaggagactctgtgagcttttcctgc
aagtccagcggagttccagtgacacacgttgtgctcagcaggagggtgaatggtgtaaaa
acagagctaatgtctagtgaaggggctgaaacatcagttgccctcctctccgtcaagctg
gccgactctggcatgtttgtgtgtgaggctttcaatgagtatggcaggcaggagaccact
ctcaatctaactgttgaagctcatttgctagaagtggcgctacaaccggacggtgaggtc
gtgttggagagaggctccagcctggtcctctcctgtcaggcttcaggttgccctcaaccc
gagttctcctggaagaatctttcaaatatgccaatcctcaggcggcttaagacagatggc
tttcagtcccagctgtttttcgatctagtagagttggatgacgagggaacttacctttgt
gacgtcacatgtggctcaatcaagaagtccaaacagacagaagtgaaggtgttttcattt
ccaagtcctgtcgtaaaaaactctggaccttctctggtgggagagataatgaaattgacc
tgcactgttcaggaagttttcccggccaaccttttccaaatcctgtggatggatggagag
agagaaatgcattcggaaactggatcattttcaaggggtacaacaaatctgacttcagtg
tattcttaccacgtagacactgaagaccaagacaagcacatcacctgcaaagttttgctg
gaaatgcatggtgtgccagctgttcaagcagtaaagacagcatctactacattgtccatt
cactatcccccgagagtgaccaggattactgtgagtccactgacagagttaaaggaagga
gaatctgtaagcatttcttgcctttccgacagctttccagtggggcgtacagtgctgagc
agggtggaggacggcatacaaacagagctaatggccagtgatgggcttgaaacattgttt
accattccttcagtcgagttggatgactctggcatttatatttgtgaaacttctaacatg
tatggaagccacaatgatagtgtggagattaccattaaagcaccacccaggaatatgaca
gtggagatctttccatccacggatgttcaggaggggcagaatatcaccatctgttgtcgc
tccgtgagcttccctccacctgcggtggtcctcagtaagctggatagtgagaaaaatgtc
tattctcttgatggtgtattcctactgatcaacctcacggccaacgacacaggcctatac
caggtcaacgtcaccaactacctgggctacgagacagagatttttaacatcaatgtgatg
gagaaaagagtcaaccctccatttggctggaattattttttaatccctgcgatttgcctg
ggagttgctgctgcgctgctcggtgttgtggtgtacgtgtggagcgctagaaagaaggga
tcatacgaccttaccaaatgcaatccaagtaccgtgtaa
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