KEGG   Sinocyclocheilus grahami (golden-line barbel): 107588407
Entry
107588407         CDS       T04918                                 
Symbol
kdm3b
Name
(RefSeq) lysine-specific demethylase 3B
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sgh03036]
    107588407 (kdm3b)
Enzymes [BR:sgh01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     107588407 (kdm3b)
Chromosome and associated proteins [BR:sgh03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    107588407 (kdm3b)
SSDB
Motif
Pfam: PWWP_KDM3B Tudor_KDM3B DUF7030 JmjC Cupin_2 C1_2
Other DBs
NCBI-GeneID: 107588407
NCBI-ProteinID: XP_016131965
LinkDB
Position
Unknown
AA seq 1759 aa
MGDSLGLIGKRLLLLLGDGSSAAAVEQAAWLRGTVRAVSVIGLASPGMEVFVEFDDSPWR
QRSWVQVYGDEVRAVLMESAIVWANCSDPSLSAAQWPALMFKPLVDHVGLGSLVPVEFFG
ARTLAFLPNGSSLHTFETEKDFGHSLLQEQLALQAAIRSWHSDSELQEILRKRSYTIQGR
RVQVYQPEFEEPWALGLVSQHDPVSHIMEITMDQVRVKGEETQVVDPRVIHVMLAVEQLE
ESPDRRKKVSDGGKGEGSRRRRTASEGDEDITLKRFKGAGEGASDGQNANGSNNDAEAMV
TCVEMPGEGVVEGRDGGGGVGGRVTSTCSPVALPSQDSSNNSNSSQQEHSHIRSTGFVKE
NGSFVPNQERISSSVSAVLPASTPTPPPLKPAPSPFSNTFPSLGQMPSLVPGAPAPKSSP
TLPAAEREEGGVLSGYPKTAALVSPGPVTISSPSQDNASSVTLSAPVEANQKPSMWGSAP
EASQGPKTPALAAAGFGKQSSEAVFGDVPTQANGSSQEDKPFGFPFGAAKESQRQDSDPS
QNLFFQIMSQNQSITQGQSKAFTSLSKCLNKEPPSLFKPAAPSEGLRKAVVASASAGLFG
SAPASGLAPMKEQPKVPDIKPAGNGILMNKPFGAVGEVHSKLPATFPSAVGQAASSVEAL
KPSLGLGTSGLGNARNVNSSSPVSGFGLLAGNKVSETHENLFLQATKETNPFLAYGGAVS
HSPFSALSTPKSSSALSASAVSPSGSSGLLSQDPPGGDAKPNLFTMAEPPKGILAPQFAA
PALTTTPSFTPAAQDGQQTSKPNKEGSDGSPGIRVSTEGLGVATLFDQTKFSLEERSQST
KRDSESSSNSDLSDLSEAEDNSGQSQKPGVPAAGEDKNKTQPAAKSRPRSKPFKAGQSVL
KDQNKVRRLKQSGESFLQDGSCINVAPHLHKCRECRLERYRKSREDEDDDDPNVSCRFFH
FRRLAFTKKGVLRVEGFLSPQQSDSMAMGLWLPSLTVHEGLDLDTSKYILANVGDQFCQL
VMSEKEAMMMIEPHQKVAWKRAVRGVREMCDVCETTLFNIHWVCRKCGFGVCLDCYRLRK
NRPPEDESPEEEVFSWLKCAKGQPHEPQNLMPTQIIPGTALYSIGDMVHAARGKWGIKAN
CPCTSRHNKPLVRPSAPNGLSQSGAANSVGNGATSTSATTRPNGEPAAGVAVKTEPVEEA
GIADTTSGSSGTNSSTPSPAPAQTPATKDGKGSSSALHWLADLATQKEPKESLRSMMGRD
SRAPFGLDSFGTLSKPSGSSPKLFNSLLLGAGPSQPKAEGTSLRDLLNSGPGKLPQGPAE
GGVPFPSVFSTAGQADKMKGGLPNFLDHIIASVVETKKAEGRRASGSAEGGESGTAPRRE
GLMGLSVLDPHTSHSWLCDGRLLCLQDPSNTNNWKIFRECWKQGQPVLVSGIHKKLKGNL
WKPESFSKEFGDQDVDLVNCRNCAIISDVKVRNFWDGFQVISKRLKGGDGQPMVLKLKDW
PPGEDFRDMMPTRFDDLMENLPLPEYTKRDGRLNLASRLPNFFVRPDLGPKMYNAYGKRS
AFNILATAYEEYTDKADLAGFKEVMQTIEEGDVDDMTKRRVYEAKEKPGALWHIYAAKDA
EKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDQTLRRRLYEEYGVQGWSIVQFLGDAVF
IPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFRHLSTTHTNHEDKLQVKNIIYH
AVKDAVGTLKAHEPKLGRS
NT seq 5280 nt   +upstreamnt  +downstreamnt
atgggggactcgctcggtctgatcgggaagcggctgctgctgctgctcggtgacgggagc
tccgcggcggcggtggagcaggcggcctggctccgcggaaccgtgcgggcggtcagtgtg
atcgggctggcgagcccggggatggaggtgtttgtagagtttgacgacagcccttggcgg
cagcgctcatgggtgcaggtgtacggggacgaggtgcgagccgttctcatggagagtgcc
atcgtctgggccaactgcagcgacccatcgctctccgctgctcagtggccagccttgatg
ttcaaaccgctggttgaccatgtgggtttgggatccttggttcctgtggagttctttggt
gcaagaactttggcatttctccctaatgggagttcactgcacacttttgagactgaaaaa
gattttggacactctttgctacaagagcagctggcccttcaagctgccatcaggagctgg
cacagtgactctgagttgcaggagatcctgcggaaacgatcttacactattcagggtcgg
agagtgcaggtgtaccagccggagtttgaggagccctgggccctgggactcgtatctcag
catgatcctgtttcacacattatggagattaccatggaccaggtccgtgtgaaaggtgaa
gagacacaagtcgtcgatcctcgggttattcatgtgatgcttgctgtggaacaattagaa
gagagcccagatcgacgcaagaaagtgagcgacggtgggaaaggtgagggcagccggcgg
cgcaggacagcatcggaaggagatgaagacattactctgaaacgttttaaaggagccgga
gagggcgcctctgacggccagaatgccaatggctccaacaacgatgctgaggctatggta
acatgcgtagagatgccgggagagggagtagtggagggaagagacggagggggtggcgta
ggtgggagggtgacgagcacttgtagtccagtagctttgccaagtcaagactcttctaac
aacagcaattcctctcagcaggagcactcccacataaggagcacaggttttgtcaaggag
aatggcagttttgtcccgaaccaagaaaggatatcgtcttcagtatcagcggtgcttcct
gcgtccactccaacaccacctccattgaagcctgccccatcgcccttttccaacactttt
ccttctttgggtcaaatgcccagcttggtgcccggggcccctgcccctaaatcgtctccc
acactcccagcagccgagagggaggagggaggtgtcctttcagggtatcctaaaacagct
gccctggtgtctccaggtcctgtgaccatttcatcaccttcccaagacaacgcttcaagt
gtgactctctctgctcctgtagaagcaaaccaaaagcccagtatgtggggatcagctcca
gaagcaagccagggccccaagacccccgctctagctgctgcaggatttggtaaacagtcg
agtgaggcagtgtttggggatgttcccacacaggccaacggttcttcccaggaggacaag
ccttttggctttccttttggagctgcgaaggagtcgcagaggcaagactctgatccctca
cagaacctgttcttccaaatcatgtctcagaaccagagcatcacacaaggccagtcaaag
gccttcacgtccttgtccaagtgcctgaacaaggagccgcccagcctgttcaagcctgct
gctccctccgagggtttaagaaaggcagttgtggcttctgcatccgctggactgtttggt
tcagcacctgctagtggcctggcaccaatgaaagagcagccaaaagtgcctgatatcaag
cctgcaggcaatgggatcctaatgaacaagcctttcggagcggtgggggaggtgcacagc
aaactcccagccacgtttccctcagccgtaggtcaagctgcgagttctgtagaggctctg
aaaccctctttgggattaggaaccagtggccttggcaatgccagaaatgttaacagctcg
agtccagtcagcggttttggtctgcttgctggcaacaaggtttcagaaactcacgagaac
ctttttctacaggccaccaaggaaacaaatccatttctcgcttacggcggagctgtttcg
cacagcccttttagtgcattgtcaaccccaaagtcgtcatctgcgctgtccgcatctgct
gtttcaccttcgggcagctccggtctacttagtcaagatcctcctggtggagatgccaaa
ccaaacctgttcaccatggcagaacctcctaagggaatcttagccccccaattcgctgct
cctgctctcacgaccactccatcattcactccggctgcccaggatggacaacagacgtcc
aaaccaaacaaagaaggttcagacggcagcccgggaatccgcgtcagcaccgaaggccta
ggtgtcgctacgcttttcgaccaaaccaagttttctttggaggaacgcagtcagtccact
aaaagggattcagagtccagtagcaacagtgacctgtctgatttgagcgaggcagaggac
aactcaggccagagccagaaacctggggttcctgcagctggtgaggataagaacaagacc
cagcctgcggctaagagccggccgcggagcaaacccttcaaagcggggcagtccgtgttg
aaggaccagaataaggttcggcgcttgaagcagtccggagagtcctttctgcaagacggc
tcctgcattaacgtggcgccccacctgcacaaatgccgcgagtgccgtctggagcgctac
aggaaatcccgcgaggacgaggacgatgacgacccaaacgtttcctgccgattcttccac
ttccgcaggctggctttcactaagaagggagtccttcgcgtggaaggctttctgagcccg
cagcagagtgacagcatggcaatggggctttggctcccctccctcacggtacacgaagga
cttgacctggacacgtccaaatatattttagcaaacgtgggtgaccagttttgccaactg
gtcatgtcagagaaagaggccatgatgatgatagagccccatcaaaaagtggcatggaag
cgagctgtgaggggagtgagagaaatgtgcgacgtgtgtgaaacaacgctgttcaacatc
cactgggtgtgtcgcaaatgcggtttcggcgtttgtctcgactgctaccggctacgcaag
aacaggccacctgaagacgagagtccagaagaagaggtgttctcatggctgaagtgtgct
aaaggccagccacacgaaccacagaacctcatgcccactcaaattatacctggaacagcc
ttgtacagcataggtgacatggtacacgcagccagaggtaaatgggggatcaaagcgaac
tgtccctgcactagtcgacataacaaacctttggtgcggcccagtgctccaaatggcctt
tcacagtcgggtgcagctaacagtgtggggaatggagccacttccacttcagccacaacc
cgtccgaacggggaaccagcagcgggtgtagcagtcaaaacagagcctgttgaagaggcg
ggcattgctgacactacgtcaggctccagtgggacaaacagcagcactcctagccctgct
cctgcccagacaccagccactaaagatggcaagggcagttcctcagcccttcactggctg
gccgacctggccacacaaaaggagcccaaagagtctctgcgctccatgatgggtcgtgac
tctcgtgctccatttggtctggattccttcggcaccctttccaaaccctcagggtccagt
cccaagctcttcaatagtctgctgcttggcgctggcccttcccaacccaaagcagagggc
actagcctccgggatctgctgaactctggccctgggaagcttccgcagggtcccgccgaa
ggaggtgttcctttcccttcagtgttctccactgctggtcaggctgataaaatgaaggga
ggccttcctaacttcctggatcatataattgcatcagtggtggagactaagaaggcagag
ggtcgacgtgcgtcagggtcagcagaaggcggcgagtcggggactgctcctcgcagagag
ggcttgatgggtctcagtgtattagacccccacacttcacactcgtggctgtgtgatggc
cgtttgctctgcctgcaggaccccagcaacaccaacaactggaagatcttcagagagtgc
tggaaacaaggacagcctgtgctggtctcaggcatacacaaaaagctgaagggtaacttg
tggaagccagagtccttcagcaaggagtttggagaccaggatgtggacctggtcaactgt
aggaactgcgccattatctctgatgtcaaagtccgaaacttctgggatggcttccaggtc
atttccaagcggttgaagggtggagatggccaacctatggtactaaaacttaaagactgg
cctcctggagaagatttcagagacatgatgcccactcggtttgatgatcttatggagaac
cttcctctgccagagtacactaagagagatggccgtctcaacttggcctctcgtcttcca
aacttcttcgttcggccagatttgggtcctaaaatgtacaatgcctatggtaagagatct
gcattcaacatcctcgccactgcttatgaggaatacactgacaaagcagacctcgctgga
ttcaaagaggtgatgcagaccattgaagagggagatgtggatgacatgactaagagaaga
gtctatgaagcaaaggagaaacctggcgctctctggcacatctacgccgccaaagacgct
gagaagatccgcgagctcctgcgcaaggttggagaggaacaaggtcaggagaacccacca
gaccatgatcctatccacgaccagagctggtacttggaccagacgctgcgccgcaggctg
tacgaggagtatggagtccagggctggtccattgtgcagtttttgggagatgccgtgttt
atcccagctggagcgccacatcaggtgcacaacctgtacagctgtatcaaggtcgcagag
gactttgtttctcctgagcacgtgaagcactgttttagactgacgcaggagttccgccac
ctttccaccactcacactaaccatgaagacaagctacaggtgaagaacatcatctaccat
gccgtgaaggatgctgtgggaacattaaaagcccatgagcctaaactaggccgctcttag

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