Sinocyclocheilus grahami (golden-line barbel): 107588528
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Entry
107588528 CDS
T04918
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04140
Autophagy - animal
sgh04148
Efferocytosis
sgh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107588528
04148 Efferocytosis
107588528
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107588528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107588528
Membrane trafficking [BR:
sgh04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107588528
Hops complex
107588528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3H2C3
TPR_GEMI5
zf-ANAPC11
TSGP1
Beta-prop_EML_2
zf-RING_UBOX
zf-RING_5
WDR55
zf_RING_Vps8
ToxA_N
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
107588528
NCBI-ProteinID:
XP_016132147
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MAAFLQWRRFVFFDKETVKDPSENGKNFQLPVGISACDSGRGHIVLGDMDGQIWFLTRSL
QLSSFQAYKLRVTHLYQLKQHNILVSVGQDEAGINPLVKVWNLDKKDSGSPLCTRIFPAI
PGNKPTEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLSLHEGNCPITGLAFR
QAGKVTHLFVATLEKVQCYTLSVKEYPRIELDTHGCALYCSALTDPSQDSQFIVAGDDCV
YLYQPDERGPCFAFDGHKLLTHWHRGYLLLLTHNNKSPSRSDYGSRQTSPTEKHILTIYD
LDNKFIAYSAAFDDVIDVLAEWGSFYVLTRDKTLYMLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDNDGLSEIFRQYGDHLYVKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSNESEVHFDVEIAIKVLRQA
GYHSHAVFLAERHMHHEWYLKIQLEDLKNYQEALRYIGRLPFDQAESNMKRYGKILMHHV
PESTTILLKHLCTDYHPSKDSTDRDSLDRPAENKANPEEFIPVFANNPRELRAFLEHMIK
VDPFSPEGVYDTLLELRLQDWAHEQDPGKKKVLQEAALSLLRSDNTVFDKALVLCQMHNF
KEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVEACKRYGDSEVCLWEQALGYFARKEENCK
AYISEVLQHIDENNLMPPLLVVQTLAHNSTASLSVIKDYLINKMERETQQIEGDERKIRQ
YREETAHLRAEIQELKTCAKIFQKTKCSMCNSPLELPSVHFLCGHSFHQHCLESFAESEA
ECPTCTPENRKVMDMLRVQDQKRDLHDNFHRQLKCSNDGFSVIADYFGRGVFNKLTLITD
PPGGKSGAGNLEAEFNRDLLINTKRNV
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttcttacagtggagacgttttgtgtttttcgataaagaaacggtgaaagat
ccgagcgaaaatgggaaaaatttccaactaccggtgggaatatcggcttgtgattcaggt
cgaggacacattgtgcttggagatatggacgggcagatctggtttttgacccgctccctg
cagctgtccagctttcaggcttataagctgcgcgtgacacacctgtaccagctgaaacaa
cacaacatcctggtgtctgtgggtcaggatgaagctggcatcaatcctctggtgaaggtg
tggaaccttgataagaaggacagcggcagtcctctgtgtacccggatattccctgccata
cctggaaacaaacctactgaagtgtcttgtctcagtgtacatgaaaaccttaatttcatg
gctataggttttacagatggcagtgttgtgctgacgaagggtgacataaccagagacaga
cacagtaaaactctcagcctccatgagggcaactgtccaatcacaggcctggctttccgg
caggctggcaaagtcacacacctgtttgtcgccactttagaaaaagtgcagtgttacaca
ttatcagtgaaagagtaccctcgtatagaactggacacacacggctgtgccctttactgc
tcggcgctcacagacccctcgcaggactcacagttcatagtggctggagatgactgtgtg
tatttgtaccaacccgatgagagaggaccctgttttgctttcgatgggcacaaacttcta
actcactggcacagaggatacctgctgctactcacacacaataacaagtcacccagcaga
tctgattatggcagcagacagacatcccctacagaaaagcacatcctgaccatttatgac
cttgacaacaagttcatcgcttacagtgcggcgtttgatgatgtcattgacgttctggca
gaatggggctctttttatgtccttacgagggacaaaacactgtatatgctgcaagaaaaa
gacacgcagaccaagctagagatgctgtttaagaagaacctgtttgtgatggccattaac
ttggctaaaagtcaacatctggacaatgatggtctgtctgagatattcagacagtatgga
gaccatctctacgtcaaaggggatcatgatggagctattcagcagtatattcgcaccatt
gggaagctcgagccctcatacgtaatccgtaaatttttggatgcacaaaggatacacaac
ttgacagcgtacctacaggccctccacaggcaatcgctggccaacgctgaccacactact
ctactgctcaactgttacaccaaactgaaggacagctccaagctggaagagttcataaag
agcaatgaaagtgaggtgcatttcgatgttgaaattgccatcaaggtgttacgtcaggcc
ggttatcacagtcacgccgtgtttctggcagagagacacatgcaccatgaatggtatcta
aagatccagctagaggatttgaagaattatcaggaggctttacgctacattggaaggttg
ccatttgatcaggcagagagcaatatgaagcgttacggaaaaattttaatgcaccatgtg
cctgaaagcaccaccatcctcttaaaacacctttgcaccgactatcaccccagcaaagac
tcaaccgacagggacagcctggacaggcctgcggaaaacaaggccaatccagaagagttc
atcccagtctttgccaataacccacgagagctgcgagcgttcctggaacacatgatcaag
gtggatccgttctcacctgagggagtttatgacactctgctagagctcagactacaggac
tgggcacatgagcaggacccagggaagaagaaagtcctgcaggaggcagcactgtccctg
ctgaggagcgacaacactgtgtttgacaaagccctggtactctgccagatgcacaacttc
aaggaaggagtgctgtatctgtatgaaaagggcaaactgtaccagcagatcatgcattac
cacatgcagaatgaggagtacgggaaagtcgtggaggcctgtaaacgttatggggacagt
gaggtgtgtttgtgggaacaggctctgggctattttgcacgcaaagaagaaaactgcaag
gcctacataagtgaagtcctgcagcacattgatgaaaataacttgatgcctccacttctg
gtggtgcagactttggctcataactccacagcatcactgtcagtcataaaagactacctg
ataaataaaatggagcgggagacccagcagattgagggagatgaaaggaagattcgacag
tatagagaggaaacggcccatcttcgtgctgaaatacaagaacttaaaacctgtgcaaag
atcttccagaagaccaagtgcagcatgtgcaacagcccactagagctgccatctgtgcac
ttcctgtgtggccactctttccatcagcattgccttgagagctttgcagagagcgaggcc
gagtgccccacctgcacccctgagaacaggaaagtgatggacatgttgcgtgtgcaagat
cagaaacgagatctgcatgataatttccacagacagctcaaatgctctaatgacggcttc
tcagtcatcgctgactattttggccgtggagtgtttaacaaactcactctgataacggat
cctcctggaggaaagagtggagctgggaatctggaggctgaattcaaccgagatctgctc
attaacaccaagaggaatgtttga
DBGET
integrated database retrieval system
