Sinocyclocheilus grahami (golden-line barbel): 107588692
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Entry
107588692 CDS
T04918
Symbol
tdrd9
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD9
KO
K18408
ATP-dependent RNA helicase TDRD9 [EC:
5.6.2.5
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sgh03036
]
107588692 (tdrd9)
Enzymes [BR:
sgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
107588692 (tdrd9)
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107588692 (tdrd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_C
ResIII
nSTAND3
AAA_14
HA2_N
AAA_22
AAA_19
TUDOR
Herpes_ori_bp
PhoH
T2SSE
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
107588692
NCBI-ProteinID:
XP_016132389
LinkDB
All DBs
Position
Unknown
AA seq
1075 aa
AA seq
DB search
MHQAITSAQIAHWFTVGVQFANITITDEVKKQAEAPSTTDSSSVEQLSEQTSPEKAGSDG
GNQKSRRPELPTSPGTTPPSLGSYVYPILPITKNRQELVSLIENNSVIIIRGATGSGKTT
QLPQFILDHYAEKKTPCNLVVTQPRKIGATSIARWVARERKCTLGSLVGYQVGLEKMATE
HTKLIYVTTGVLLQKLVSAKTLTEYSHIFIDEVHERTEELDFLLLVVRKLLRTNSRYVKV
ILMSATINCAEFAEYFGTPIRNQMNPAYVFEVEGAPYAIEEFYLDELKTILPLGVNVDLT
FPVDPCITEEMYNIAISLIQSFDEMEAKDQRCSEQTGSTTHPERGSVLVFLPGLAEIQYM
KEALAKLVRKRLQVYPLHSTVTLEEQNGVFLVPIPGYRKIILSTNIAESSVTVPDVKYVI
DFCLVRQLVCDKETNYRCLRITWASKTSCNQRRGRAGRVSKGFCYRLVSRHFWEHEIPDF
TIPEMLRSPLASTLLKVKLLDMGDPRSVLSTALTPPNLNDIERTVLQLKQIGALSDQSNS
QRQFDGELTFLGRVLAHLPVDLQLGKLIVFGHVFGCLEECLIIAASLSLKSFFAMPSLQQ
LAGYRSKLSFAQNLPSDLIAFVNAFKAWYTSRAKGELRHPKDELEWGKENCIQIKRIREV
AELFEDLKKRVSRFNMHISSSSNPTDYTSLHKQRFILQGAIAGAFFPNYFSQGEIDEQLA
SKELSGNDPKTTIMIRNLPPFAFLCYKQLQSLFRQCGQVKSICFDGSRAYVVFYRSCVRE
TGVLPEVLLALLRARQTPALQLQVHHADEVEARAKGKPITHLRYTRVNVDVQSHAVSPVG
VLSSTVNPEKLPSSRDFIINITEVIDVGHFWGFRTDESSVEKQCQLTAALNIRDLRPVSV
SLYPNLLCVAPFKDGQQMAKYYRAKVLHILGSNVESYLTGFTGALCGLGWNSVSQNAMLP
EHDIELAFDVKFDFEDITEINALRGTVNKLVCDGPNGLTNLSPDKISSLQEEARERLVGL
FIKNPPRPECTPVYYEKFKKWNQVDRSQQMELQEKDDGKSKGVLFQLHPITLLNM
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaggccatcacatcagctcagatagcccactggtttactgtcggggtacagttt
gcaaacatcacaatcacagatgaagtgaaaaagcaggccgaagctccttctactacagac
agcagctctgtggagcagttgtctgaacagacttctccagagaaggcaggatcagatgga
ggaaaccagaagagcaggaggccagaactaccaaccagtccaggaaccaccccgccttcg
ctcggcagttatgtgtatccaattctccctattactaagaacagacaagagttggtctct
ctgattgagaataactccgtgatcatcattcgtggagcgaccggcagtggtaaaaccacc
cagctgccacagttcattttggatcattatgccgaaaaaaagacgccctgtaatctggtt
gttactcagccacgcaaaattggcgccaccagcattgcccgctgggtggcacgtgaacgc
aaatgcaccctgggcagcttggtggggtatcaggtgggtttagagaagatggccacagag
cacaccaagctgatttatgtgaccacaggagtcttactgcagaaattggtgtcagccaaa
acactcacggagtactctcacatcttcatagatgaggtccatgagagaacagaagaactt
gacttcctgttgctggttgtcagaaaactgctgcggaccaattccagatatgtcaaggtc
attctgatgtcagccaccataaactgtgcagagtttgcagagtattttggtactccgatc
cgcaatcagatgaatccagcatatgtgtttgaggtggaaggagccccatacgccattgaa
gagttctacttggatgagctcaaaaccatcctacctcttggagtcaatgtggacctaacc
ttcccagtcgacccttgtatcacagaggagatgtataatattgccatctctcttatccag
agctttgatgagatggaggctaaagatcaaaggtgctctgagcaaactggaagtactact
catccagagagaggtagtgtgcttgtctttctgcctgggcttgctgaaatacaatatatg
aaggaggccctcgcaaaacttgtgcgcaagaggctgcaggtatatcctcttcactcaact
gtcactttagaggagcaaaatggagtgttcttggttcctatacctggataccggaagatt
attctctccacaaacatcgctgagagttctgtcactgtgcctgacgttaaatatgtgatt
gacttctgccttgtgcgtcagttggtttgcgataaggagactaattacagatgtcttcga
atcacctgggcatccaagaccagttgcaaccagcgtcgaggtcgtgctggacgggtgtct
aaaggcttctgttacagattggtgagcagacatttctgggagcatgagattccggatttc
acaatcccagagatgctgcgatcaccattggccagtaccttgttgaaggtgaagttgttg
gatatgggcgatccccgctcagttctctccacagccctcacaccacccaacctaaatgac
atcgaaagaactgtcctgcagctcaaacagattggagctctttctgatcagagcaacagt
cagaggcaatttgatggcgagttgacatttctgggtcgcgtgttggcgcacctgcctgtg
gatctgcagctgggcaagctgattgtttttggacatgtgttcggctgtctggaggagtgt
cttatcattgctgcgtctctctctctgaagagtttctttgccatgccatcactgcagcag
ttggctgggtacaggagcaagctgagctttgcacaaaatcttccaagtgacttaattgct
ttcgtcaatgccttcaaggcctggtacacatctagagctaaaggagagctcagacaccca
aaggatgaactggaatggggcaaagagaactgcattcagatcaaacgaatcagagaggtg
gcagagctctttgaggatctaaagaagagagtgtccagatttaacatgcacatcagcagc
tcctcaaaccccacagactacaccagcctgcacaaacagagattcatcctgcagggagcc
attgcgggtgcattcttcccaaactatttctctcagggagagattgatgagcagctggca
tctaaggaactttctggaaacgatccaaagaccaccattatgattaggaatttgcctcca
tttgcattcctgtgctataagcagctgcagtcactgttccgtcaatgtggacaggtcaaa
tcaatctgtttcgatggatccagagcgtatgttgtgttttatcgctcttgtgtgagggag
acgggtgtattacctgaggtcttgttggcactgctgcgagcacgacaaactccagcgctc
cagctgcaggtgcaccacgcagacgaggtggaggcccgcgctaaaggaaagcccatcaca
cacctacgttacacaagggttaatgtggatgttcagagccatgctgtgtctcctgttgga
gttctgagcagcactgtaaatccagagaaacttccatccagcagggattttatcattaac
atcacagaggtgatcgatgtaggccatttttggggctttcggacagatgagagcagcgta
gagaaacagtgtcagttaacagcagccctaaacataagagatctgagacctgtatctgtc
tctctctatccaaacctgctgtgtgtggcccccttcaaagatggacagcaaatggccaaa
tactatagagccaaagtactgcacatccttggcagcaatgtagagtcatatcttaccggt
tttactggtgctctgtgcgggctgggctggaactccgtttcccaaaatgcaatgctgcct
gaacatgacattgagcttgcctttgatgtcaagtttgattttgaggacatcacagagata
aatgctttgagaggcacagtgaacaagctggtgtgtgacggaccaaatggcctgacaaac
ctgagtcctgacaagatcagcagccttcaggaggaggcccgggaacgacttgttggactg
ttcattaaaaaccctcccagaccagagtgtacacctgtgtactatgagaaattcaagaaa
tggaaccaggtggatcgctcccagcagatggagctgcaggagaaggatgatgggaaatcc
aaaggtgtgctatttcagctgcatccaatcaccttactgaacatgtga
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integrated database retrieval system
