Sinocyclocheilus grahami (golden-line barbel): 107588851
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Entry
107588851 CDS
T04918
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107588851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107588851
Membrane trafficking [BR:
sgh04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107588851
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
TPR_VPS8_2
WD40_CDC20-Fz
Clathrin
zf-RING_Vps41
zf-RING_5
zf-RING_2
zf_RING_Vps8_fungal
zf-RING_11
zf-RING_UBOX
ANAPC4_WD40
Beta-prop_HPS5
EIF3I
WDR55
PHD_4
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
107588851
NCBI-ProteinID:
XP_016132578
LinkDB
All DBs
Position
Unknown
AA seq
1146 aa
AA seq
DB search
MAESPDSRSLVSASSQLNLMEIEAIDDKEFDIPQVDTPPTLESILNEPEEEDEPFILEDT
CLLNTENIDAHSCETSSLASSDSGDRTHLKRRRKAVETNATVHGSVLRRNLLKGISAQIV
SAADKVDAGLPTAITVSNVIAVGTSHGLALVFGKDQNQALRLCLGTTATGAEYGAVSALS
INHDCTRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAILHVKFTDHPALAVCNDSGG
SVFELSFRRVMGMRTCESRCLFSGSKGEVCCVEPLHAGPELKDHPITHYSLLAMASLTKI
LLIGLKPSLKVWMTFPYGKTDPASVPLLAWQFVAVQKTINPVLAFCRGDTIHFLLVKKDE
SGTIHVIKQRQLQLNCDLISLSWINPRTLVLMDSTEKLRVVDRPSQEELETVDMAELQLV
YNSSHFKSLATGGNVSQALALVGEKTCYQSVCSYAGQIMYLGTKSVHIMTLRNWRERVDH
LLKQEKFMEALSLAWSFHEGTGKAVLGLFADPAKRKGVVADKMVEILLQYVDRSLKKCPE
QGKIQVMEQHFQDMVPVTVDYCLLLQRTDLLFNQIYPRLVENSVARGVFLESLEPYILSE
RIGCLTAPVMRDLLSYFQENGMMDSVEGCLVHMDITNLDIQQVVQMCWDNQLYDAMIYVF
NSGMNDYISPMEDLVSINSAKTAELVAVHFADQVQPIITSLQDDCLAFQFLKCLLNPSSR
ESLSPQTVLKLGPDLHELLVDLLCQFSPQQVIAFLKTSQDYRLEEAIQITAKHKLHEATA
YLLEKKGDVQGAFEVLLQTLKGKLHKLALEGSETDKPDGEGEETGDEVPSLLQRVEEALH
DIIALCQRSSHGLNQQQREALWFPLLEAMMSPQKLLKGANTKHTSEALKELTMKVLNSMS
SFIAPPAIIQRILQDPVYGKGKLAEIQGLILGMLETFNYEQTLLETTTNLLNSDLHWSLS
HLRKAVSRGLHPRQDHCNICLQQYKRRQESEEEIIIFSCGHLYHCQCLQRKEVGVLSERQ
YSWSCYKCTSNQGTRPADRPSAESSRSCSTSLAQTKVMSTPHGIVAEAHGRKMLTEATLD
AQQTQAWDHFRTLYRGPSRLAVLTELTHSHGSERAGLSNPVHPGTGSIYHSENVQLKLSP
PPLVEE
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatctccggacagtcgcagtcttgtttctgcgtcctcacagctcaatttaatg
gaaatagaggcgattgatgataaagagtttgacatccctcaagtggacacgcctccgacc
ctcgagagcatcctgaatgagcctgaagaggaggatgagccattcattctggaggacacg
tgtcttttgaacacagagaacattgatgcccactcgtgtgaaacctcgtctctggccagc
tctgacagtggagaccgcacacacttaaagaggaggaggaaagcagtggaaactaatgct
acagtacatggatctgttcttagacgcaatctgctgaaaggcatctcggctcagatagta
tcagctgcggataaagttgatgctggcttgccaacggcaataactgtttcaaatgtgatc
gctgtagggacgtcacatggtctggccttagtatttggaaaagaccagaaccaggctctg
cgtctctgtctgggcaccacagcgacaggagcggagtatggggcggtgtcagctctcagt
attaatcacgattgcacacgactgctttgtggctttgccaaaggacagatcaccatgtgg
gatctggccaatgggaagctgctccgcactatcactgacgcccatccacctggcactgcc
atactacatgtgaagttcactgaccatccggcgctagctgtgtgtaatgacagtggcgga
tctgtgtttgagctgtcattcaggagggtaatggggatgaggacatgtgaatccaggtgt
ttattcagtggttctaaaggtgaggtttgctgtgttgagcctctacatgctggacctgaa
ctgaaagatcatcccattacccactactccctgctggccatggcctcactcaccaagatt
ctgctgataggactgaagccttcactcaaagtatggatgacttttccctacggcaagacg
gatcctgcgagtgttcccttgttggcttggcagtttgttgcagtccagaaaacaatcaac
cccgttctggccttctgtagaggagacaccatccacttcctgctggttaaaaaggatgag
tctggcaccatccatgtcatcaaacagagacagcttcaactcaactgtgaccttatcagt
ctgagttggataaacccccgtacgcttgtgttaatggacagcacagagaagctgcgagtg
gtggacaggcccagtcaggaggaactggaaacggtggacatggccgagctgcagctggtt
tataacagcagccattttaaatccctcgctaccggaggaaatgtcagccaagcactggct
ctagttggagagaagacatgttaccagtctgtttgcagctatgcaggccagatcatgtat
ctgggaacaaagtctgtgcacatcatgaccctgaggaactggcgtgagcgtgtggaccat
cttttgaaacaggagaagttcatggaggctctgtctcttgcctggtccttccacgagggc
accggcaaagctgtgctaggtctatttgcagaccctgctaagagaaaaggtgtggttgca
gacaagatggtggaaattttgttacagtatgtggatcgctctctgaaaaaatgtccagag
caagggaaaatccaggtgatggagcaacacttccaggacatggttcccgtcacggtggat
tattgtctccttctgcagagaacggacctactgtttaaccagatctaccctcggctggtg
gagaactcagtggccaggggtgtgtttctggagagtctggagccttacattctgagtgag
aggattggttgtctgactgcacccgtcatgagagacctcctcagctacttccaggagaac
ggcatgatggatagtgtggagggatgcctggtccatatggacatcaccaatctggacata
cagcaggtggtgcagatgtgctgggataaccagctttatgatgccatgatctacgtcttc
aacagtggcatgaacgactacatcagccccatggaggatctggtcagcattaactcagct
aagacagcagagctagttgcagtgcactttgcagaccaggtgcagcctatcatcacatct
ctgcaggacgactgtttggcgttccagtttctgaagtgcctcctgaaccccagctccaga
gagagtctgagtcctcagactgtcttgaagttgggtccagatcttcatgagctcctagtg
gacctactgtgccagttcagtcctcagcaggtcatcgccttccttaagacctctcaggac
taccgactggaggaggccattcagatcacagcgaaacacaagctgcatgaggccacagcc
tacctgctggagaagaagggagatgtgcagggagcttttgaagtgctgctacagaccctg
aagggcaaactccacaaacttgccctggaaggctcagagacagacaagcccgatggtgag
ggggaggagacaggtgatgaagtgccgagtctgttacaaagagtggaggaagctctgcat
gacatcattgctttgtgtcagaggagctcgcacggtctcaaccagcagcagagagaggct
ctgtggtttcctctcctcgaggcgatgatgtcaccacagaaactactcaaaggagccaac
accaaacacacttcagaggcattaaaagagctcactatgaaagtcttaaacagcatgtcc
agttttatcgccccacctgccatcattcaacgcatcctacaggaccctgtgtatgggaaa
ggaaagctggctgagattcagggactcattttagggatgctagaaaccttcaactatgaa
cagacattgttggagaccaccacaaatctgttgaactcagatcttcactggtctctgtca
cacctgcgtaaggcggtcagtagagggcttcaccccagacaggaccactgcaacatctgc
ttacagcagtacaagagacgccaggagagcgaggaggagatcattatctttagctgtgga
cacctgtaccactgccagtgtcttcagcgtaaagaggtgggtgttttgagcgagaggcag
tactcatggagctgctacaaatgcacatccaaccagggcacacggccagcggacagaccc
agcgcagagagctctcgatcatgctctacttctctggcacagaccaaagtgatgtctact
cctcatgggattgtggcagaggctcatgggagaaagatgttgactgaagccactctggat
gcccagcagactcaggcctgggatcatttccgcactctctacagaggaccatctaggctt
gctgttctgacagaactcactcattcgcatggcagtgagagggccggtctgtcgaaccct
gtccatccaggaacaggaagtatttatcacagcgagaatgtccagctaaagctttctcct
ccgccactggtggaggagtag
DBGET
integrated database retrieval system
