KEGG   Sinocyclocheilus grahami (golden-line barbel): 107589131
Entry
107589131         CDS       T04918                                 
Name
(RefSeq) nuclear RNA export factor 1-like
  KO
K14284  nuclear RNA export factor
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03008  Ribosome biogenesis in eukaryotes
sgh03013  Nucleocytoplasmic transport
sgh03015  mRNA surveillance pathway
sgh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107589131
   03015 mRNA surveillance pathway
    107589131
   03008 Ribosome biogenesis in eukaryotes
    107589131
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    107589131
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgh03019]
    107589131
   03009 Ribosome biogenesis [BR:sgh03009]
    107589131
Messenger RNA biogenesis [BR:sgh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     107589131
   mRNA cycle factors
    Stress granule specific factors
     107589131
Ribosome biogenesis [BR:sgh03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    107589131
SSDB
Motif
Pfam: NXF_NTF2 LRR_NXF1-5 TAP_C NTF2 LRR_4 LRR_9 UBA_8 LRR_6
Other DBs
NCBI-GeneID: 107589131
NCBI-ProteinID: XP_016132970
LinkDB
Position
Unknown
AA seq 504 aa
MTRYREWYPNLSVITRVCESSSDPSGSAVVREVWSTESSFTDHDGRWLGVRRGWGSIKAR
LHSDTVRLQHRGAAPVPRSRFQGGSVDVSVMASQNGKSQHRFIPYGRSSQRGEGGMDKIG
GGNAHRFGAEDAERGGENWFKITVRVKLFLLKLLLCLNLSNNKLCKLTDIAELVNKAPNL
QSLNLSHNELKSEQELDKVKGFRLVELWLDRNPLCDAFKDQTTYISAVRERFPRLLRLDG
HVLPPPICFDVETGTNIPACKGSHFVSNEIQGLIQHFLQHYYCVYDSGDRQLLLEAYHDD
ACFSLSLPSINHLSRCRLKNYHEHSRNIKNIKDSSAWFHLLKRSRLTVVAFLSELPKTQH
DMNSVNVDVNTYSRTLLVFTVSGVFKEADDKLRDRVKAFSRVFITVPAQNSGLCIVNDEL
FVRNATSEEIHCAFAAPAPSNSPVLPTLAASQQEMLSAFSQMSEMNLEWSQKCLQDNAWD
FHRAAQIFTELKAQGKIPEAAFIK
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgactcgataccgggaatggtaccccaacctgtctgtgataacacgggtttgcgagagt
tcttcagatcccagtggctctgctgtagttagagaggtgtggagcactgaaagctctttc
acagatcatgacggccgctggttgggggtgcgtcgaggttgggggtccatcaaggctcgt
ctacacagtgatacagttcgcttgcagcatcgaggtgcagccccggtaccccgcagcagg
tttcagggcggcagtgttgatgtgtctgtgatggctagtcagaatgggaagtcccaacac
agatttattccatatggccgttctagtcagagaggagagggggggatggacaagattgga
gggggaaacgcgcacagattcggagcagaagatgcagagagaggaggggaaaattggttt
aaaattacagtaagagttaaactattcctgttaaaacttttgttgtgtttgaatctgagt
aacaataagctgtgtaagctgactgacattgcagaacttgtgaacaaagcccctaacctg
cagtccctgaacctgtctcataatgagctgaagtcagagcaagagctggataaggtgaag
gggttcaggctggtggagctctggttggacaggaaccctctgtgtgatgccttcaaagat
cagaccacatacatcagtgctgttcgggagagatttcccaggcttctcagattggacggt
catgtgcttccacctccaatctgctttgacgtggaaacaggcacaaacatccctgcttgc
aagggcagccactttgtatcgaatgaaatccagggactcattcaacattttctgcaacat
tattactgtgtgtatgactctggggacagacagctgctgctggaggcatatcacgatgat
gcctgcttctctctcagtctgccatccataaaccatctctctaggtgcaggttaaaaaat
tatcatgaacacagccgcaacatcaagaacatcaaagattcctccgcttggttccacttg
ctaaaacgctcccgcctgactgtagtcgccttcctcagtgagctcccaaagacccagcat
gacatgaattcagtcaatgttgatgtcaacacttactcaaggactttattagtgttcaca
gtgagtggagtgttcaaagaagctgatgacaaattgagagaccgtgtcaaggctttctcc
agagtcttcatcacagttccagctcagaattctggtctgtgtattgtgaacgatgagctc
tttgtgaggaacgccaccagcgaggagatacactgtgcatttgcagcaccagccccctcg
aatagcccagtgctgcccaccctcgcggcatcccagcaggaaatgctctccgctttctcc
cagatgtctgaaatgaacctggaatggtctcaaaaatgtctgcaggataacgcatgggat
tttcaccgagctgctcagattttcacagaactcaaggctcaaggaaagatcccagaagct
gctttcataaaatga

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