Sinocyclocheilus grahami (golden-line barbel): 107589316
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Entry
107589316 CDS
T04918
Name
(RefSeq) laminin subunit beta-4-like
KO
K06245
laminin, beta 4
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04510
Focal adhesion
sgh04512
ECM-receptor interaction
sgh04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107589316
04518 Integrin signaling
107589316
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107589316
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMB1
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB4
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
107589316
NCBI-ProteinID:
XP_016133202
LinkDB
All DBs
Position
Unknown
AA seq
1840 aa
AA seq
DB search
MLFVFICKGPAMLIRLETSAFLLLLIAALVHLQDECVGNSCYPNLGDLMVGRAAQLKASS
TCGLYRPQNYCILGYLENQRKCFICDSRSPYNLHHNPNSHRVENIITTFQPERKMSWWQS
ENGVHEVSIQLDLESMFQFSHLILTFKSFRPAAMLVERSKDFGRTWKVFRYFAEDCANSF
PGVSEGLADSIDDLICDSRYSGAEPSTDGEVVLKALDPSFDIHDPYDPTIQELITLTNLR
VNFTRLITLGDTLLTRRRRNPQDKYYYALYEMVVRGSCFCNGHASQCIPVDGTRGDTFSE
PGMVHAKCVCQHNTAGLNCERCQDFYHDAPWRPGGKTDSDVCRRCNCHGHSEKCHFDLAR
YLATGGVSGGVCDDCRNNRAGPHCDLCGPYYYQDPQRSMDDPNACIPCECNPDGSVDRGL
CDSVTGQCVCKQNVEGERCDRCKFGFYGFSRDDPSGCQLCRCNFMGTIRTGNPCDQTTGT
CICKPFAFGPQCDQCLPGYWGLGNTVYGCLPCDCDIGGALRTKCSSVDGQCECRPNMVGP
KCSEPVLGYFLAPLDFYIYEAEHAAPRMAISPFIQAPPLVYPLEQIPVRPTKLPLCPSAP
KPSPTPYKEPEPPTVKPSPTPFNPHVTLPICEHYYRQRGYDFKISNGRVVVVKREKRQTR
RRRQGQRTIPFEPGSPLQVILQQRTPDQPITWTGLGFVRVQDGAGLRFNVSNIPATLDYY
VVVRYEPESTDDWTAFVNVVSFGSGDRRCLNDPFDKMFTLPASGRTATLDLPICLSDGNK
YHVDITFRKKPIADPQISSYILIDSMGLIPKVDSLPNFCTQSYLAQFQQYRCIELGAQAG
QHTLPEVCEKLIGSMSAFIHNGAVSCNCHHVGAYGSSCSKFGGQCQCKPNVIGRCCDSCT
PLTYGLGPDGCSPCDCDPSGSTSELCDQTTGQCLCREGVTARRCDKCYPGYYGFPLCRRC
QCNGLADICDLVTGDCLDCREHSAGPHCERCKDGYVGDPVSGKRCEPCLCPDVNRSGRFF
AISCNKDPYSGAPYCECLPGHTGLNCDSCSPGYYGDLRLPGGRCEECCCNNNIDPRDGEA
CDAVTGECLQCLHNTEGPRCQSCKRGYYGNALAQDCKECSCDRRGTDDTKCPAGSPCFCD
QETGKCPCRTGVKGTLCNECEDGYWNLDGESGCQPCNCDPEHALNYICDKITGQCFCQPE
YGGRKCDECGPNHFGNPDIQCMSCDCNMEGTIYPACDSYTGECLCKPGVTGLFCDDCAPG
HDTNFPACEPCHDCYHLWEKIVSDVRLDIERIETKRPCPEDDRPISELQNLSNLLEKLQS
LANMTAKDELKKLEELLARIRNETETIDPNIIIIDPTILLNTDIDNIRLEFNRLLKNLRE
KTKEIPATDVKAINDILNKIKKLYEEFIDSEKKVEAAKKAQEASRKTRENVTLEFSKCRI
GEIEKLARKAKALSVASLNKEVCGAPGDAECEKAKCGGASCGICGGPACTGSLPISLNAS
KLAEMTEKNITDLRSKLKEADAKLMGTSKMTNYIKDQAEDLMNKINQTKNKYEKEKIDTK
NLIEKLKNYLRDELVKPEDIEKLANAVLSIQLPKSPDEIKDMIEDIKRILANVTDFDDDL
EHLEKQARIAEDMKERAQEILNRTKAINVREIDKALNDTAKLNDKIFFDLDKAEENNDVI
RGKVNETEPKLKHIEDNLDSTRAKKLQDEIKALKDKTEMNRAQGKEAKDAANAVLDSAKN
IEKDLEELKEQFEKLKLNSTTQNVNEEANERLKNITIEAETLAKNVEDKMKEIEELEKRI
LVAAERKEERIKDLEALQKEADDLRNFIVDKVDKYNLCST
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgctatttgtcttcatctgcaaaggtccagctatgctgatccgattggagacatcggcg
ttcctgctcctcttgatagctgctctagtccacctccaggacgaatgtgtggggaattca
tgttatcctaacctcggtgacctcatggtgggccgcgccgcccagctcaaggcttcttca
acctgtggactctacagaccacaaaactattgcatcctgggatacctagagaatcagcgc
aagtgcttcatctgtgactccaggagcccctacaatctccaccacaatcccaacagccac
cgcgtagagaacatcatcaccaccttccaacctgaacgcaagatgagctggtggcagtcc
gagaatggtgtgcatgaagtcagcattcagttggatctggaatcaatgtttcagtttagt
catttgatattgacgttcaagagttttcggcctgctgccatgttggtcgagaggtcgaaa
gacttcgggagaacctggaaggttttccgttactttgcggaggactgtgccaactctttc
cccggtgtctctgaggggctagcagacagtattgatgaccttatctgtgatagtcgctac
tctggggcagagccgtccaccgatggagaggtggtgttgaaagccttggatcccagtttt
gacatccatgatccttacgaccctactatacaagagctgatcaccctgacgaacctgcga
gtaaactttacccgtttgatcaccctgggcgacacgttgctcacgcgacggaggaggaac
ccacaggataagtactattatgccctctatgagatggtggttcgggggagctgcttctgc
aatggccacgccagtcagtgcattcctgtggatggcacacgtggagatacctttagtgag
cctggcatggtacatgctaaatgtgtttgccaacacaacactgcagggctcaactgtgag
cgctgtcaagacttctaccatgacgccccctggaggccaggtggaaaaacagactcggat
gtttgcagaaggtgtaactgccatggtcattcagagaagtgtcactttgacttagcacgc
tatctggccactggtggggttagtggtggtgtgtgtgatgactgcaggaacaaccgtgct
ggaccccattgtgatctgtgtgggccatattactaccaggaccctcaacgctctatggac
gaccccaatgcctgtataccttgtgaatgtaatcctgatggctcagtggaccgtggtctg
tgtgattcagtgactggccagtgtgtgtgtaaacagaatgttgaaggagagcgctgtgac
cgctgcaagtttgggttctacgggttcagccgggacgaccctagtggatgtcagttatgt
aggtgtaatttcatgggaactatacgcactggcaacccttgtgatcaaacaactggaaca
tgcatctgcaagccatttgctttcggcccacagtgcgaccagtgtctgccaggttactgg
ggtctgggaaacacagtctatggctgcttaccctgcgactgtgacattggaggggcattg
agaaccaaatgttcctcagtggatggccagtgtgaatgcaggcctaacatggtaggcccc
aaatgcagtgagccggtccttggatatttcctggccccgcttgatttctatatctatgag
gctgaacatgcagcacctcggatggcaatttctccatttatacaagcccctccattggtc
taccccctggaacagatacctgtacgaccaaccaagctccctctctgcccctctgcccca
aaaccctccccaacaccttataaagaacctgaacccccaacggtgaagccgtctccgacc
ccattcaacccccatgtcacactacccatctgtgagcactactacagacagagaggttat
gacttcaagatcagtaatggcagggttgtggtggtcaagcgtgagaagcggcaaactcga
agacgaagacaaggccagaggacaatcccctttgaaccaggctcacctcttcaggtcatc
ctgcaacagcgcaccccagatcagcccatcacttggactggactgggttttgtgcgagtt
caggatggggctggacttagatttaatgtcagcaatataccagctactcttgactactat
gtagttgtccgctatgaaccagagtccaccgatgattggacagcttttgtgaacgttgta
tcttttggatcaggggatagacgttgtctgaatgacccgtttgataaaatgtttactctt
ccagcctctggaaggacagccacactggatcttccaatatgcctcagtgatggtaataaa
taccatgtggacattacttttagaaagaagcccattgccgaccctcagatcagctcatac
atcctgattgactctatgggcctcattcccaaagtggactcactcccaaacttctgcaca
cagtcatatctagctcagtttcagcaataccgttgtattgagttgggcgcacaggcagga
cagcacacccttcctgaagtatgtgagaaacttattggaagtatgtcagctttcattcac
aatggtgcagtgtcttgcaactgtcatcatgttggtgcgtatggctcatcttgcagtaaa
ttcggtggacagtgtcaatgcaaacccaacgttattggtcggtgctgtgattcctgtact
ccactgacatatgggcttgggccagatggctgctcaccatgtgactgtgatccgtctggc
tctacctctgagctttgtgaccagacaactggtcaatgtttgtgtcgagaaggagtaact
gctcgtcgatgtgataaatgttaccctggttactacggttttcccctgtgcagacgttgc
caatgcaacgggttggctgacatctgtgacctggtcactggagactgtctggactgcagg
gaacactccgctggaccccactgtgaaaggtgtaaggatggttatgttggtgaccctgtt
tctgggaagcgatgtgagccatgcttatgtccagatgtgaacagaagtgggcgcttcttt
gccatttcctgcaacaaagatccatactctggagccccatactgtgaatgtctgcctgga
catacaggcctaaactgtgactcctgctctcctggttactacggtgatctgaggttgcca
ggcggccgatgtgaggagtgttgttgcaacaataacattgatcctcgtgacggcgaagca
tgcgatgctgtaactggcgaatgtttgcagtgcttacataacacagaggggccgcgctgt
cagagctgcaaacgtggatactatggcaatgcgctcgctcaagactgcaaagagtgttct
tgtgaccggaggggcacagatgacacaaagtgtccagctggaagcccctgtttctgtgac
caggaaactggcaagtgcccatgtcgcacaggtgtcaagggaaccttatgtaatgagtgt
gaggatggatactggaacctggatggggagtctgggtgccagccatgtaattgtgatcca
gaacatgctctcaactacatctgtgacaagatcacaggccagtgtttctgccagccagag
tacggaggcagaaaatgtgatgagtgtgggccaaatcactttggaaacccagatatacag
tgcatgtcttgtgactgtaacatggaggggaccatttatccagcttgtgactcttacacg
ggtgagtgtttgtgtaagccaggggtgactggccttttctgtgatgactgcgccccaggt
catgacacaaactttcctgcctgtgaaccctgccatgactgctaccacctctgggagaaa
attgtctcagatgttagactagatattgagaggatagaaactaaaaggccatgtcctgaa
gatgatcggcctatatctgaactacaaaacttaagcaatttgttggagaagctgcagagt
ctggctaacatgactgccaaggatgagctaaaaaaactagaggagctcttggcacgcatt
aggaacgaaacagagaccattgacccaaacataatcattattgatccaaccatactgctc
aacactgacatcgacaatatccgacttgagttcaacagactcttgaagaatctcagggag
aagacaaaagagattccagcgacagatgtaaaagctattaatgatattttaaataagatc
aaaaagctctatgaagaattcattgacagtgagaagaaagtggaagcagctaaaaaggcc
caagaagcctccaggaagacgagagagaatgttacattggaattttcaaagtgtcgtata
ggagaaattgaaaagctggcgaggaaagcgaaagctctgagtgttgccagcctcaacaag
gaggtctgtggggctccaggcgatgcagaatgtgagaaggcaaaatgtggtggagcttca
tgtgggatatgcgggggtcctgcctgtacagggagtttacccatcagcctcaatgcctcc
aaactggcagagatgaccgagaagaacattactgatctgcgcagtaaactcaaggaagcg
gatgctaagctcatgggcacctcaaaaatgactaattacatcaaagatcaagctgaggac
ctgatgaataaaattaatcagactaagaacaaatatgagaaggaaaagattgacaccaag
aacctcatagagaagctcaagaactacttgagagacgagctggtgaagccagaggacatt
gagaaactggccaatgctgtgttgtccattcagctgcccaaatcccctgatgagatcaag
gacatgatagaggacatcaagaggatcctggcaaacgtcacagacttcgacgatgatcta
gagcacttggaaaaacaagccagaattgctgaagacatgaaggagagggcccaagaaatc
ttgaacagaaccaaggctatcaatgtgagggagatagacaaagcactcaatgatacagca
aagctcaatgacaagatattctttgatctggataaggctgaagaaaacaatgacgttatc
agggggaaagttaatgagactgaacctaaactaaaacatattgaggataatttggattcg
actcgtgccaaaaagttacaggatgaaatcaaggccttgaaggataagacggagatgaac
agagctcaggggaaggaggccaaagatgctgccaatgcagtgctggacagtgccaaaaac
atcgaaaaggatcttgaggaactgaaagagcagtttgaaaagttaaaactgaatagcaca
acccagaatgttaatgaagaggctaacgaacgtctgaagaacatcacaatagaggcagaa
acactggctaaaaatgtggaagataaaatgaaggaaattgaagaattggagaaaaggatt
ctggttgcagctgaaagaaaagaggaaaggataaaagatttggaggcactccagaaggag
gcagatgacttgaggaactttattgttgacaaagtggataaatacaatctgtgctccact
taa
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