Sinocyclocheilus grahami (golden-line barbel): 107589421
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Entry
107589421 CDS
T04918
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
107589421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107589421
Membrane trafficking [BR:
sgh04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107589421
Protein recycling
Other Rab GTPase associated proteins
107589421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Sulfotransfer_3
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
107589421
NCBI-ProteinID:
XP_016133344
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MSQRSERRGIHVDQSELLCKKGCGYYGNAAWQGLCSKCWREEYQRARQRQIQEDWALAEK
LQREEEAAYVSSHSSSQTQPPQSQSQHSLATFSKFEEKKTNEKTRKVTTVKKFFSPSSRT
APKKVPPEKEREKEEKLQGRRESHGENLLRDLKGIFTQPWEMASPTEALVSRLRESHEGK
TPSPSITRQSSIETDRVSRDFVEFLKTLQKPGREIHKQSRGFIESMGNKKDLSAEELSEC
VQDFYQGMSDRLLNHFKGSSEKVDRVMDQVEKYIMTRLYKSVFCPETSDDEKKDLATQHR
IRALHWVTIQMLCVPVDEEIPEVSDSVVKAITDIIEMDPKRVPRDKLACITSCSKHIFSA
IRVTKNEPASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLPA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcgctcagagcgacgggggatccatgtggaccaatcagaactactgtgtaag
aaaggctgtggttactatggcaacgctgcatggcagggcctatgctccaagtgctggagg
gaggagtaccagagagctcggcagagacagatccaggaggactgggctctggctgagaag
ctgcagcgagaagaggaggcagcttatgtcagcagtcacagttcctctcagacccagcct
ccacagtcccagtctcagcactctctcgccaccttctctaagtttgaggagaagaaaacc
aatgagaagacccgtaaggtcaccaccgtaaagaagttcttcagcccctcctctcgcacg
gcccctaaaaaagtcccccctgaaaaagaaagagagaaagaggagaagttgcagggcagg
agggagagccatggagaaaacctcctgagggatctgaagggaatttttacccaaccctgg
gagatggcctctcccactgaagctctggtatcaaggctgagagaaagccacgagggaaaa
acgcccagtccctccattacccgccagtccagcatcgagactgatcgcgtgtcacgagac
tttgtggagtttctcaagaccttacagaagcccggcagagagatccacaagcagagccgt
ggtttcatagagagcatgggaaataaaaaggatctcagtgctgaagaactgtcagagtgt
gtgcaggacttctatcagggcatgtctgaccgactcttgaatcattttaaaggctcctct
gagaaagtggacagagtaatggaccaagtggaaaaatacatcatgactcgactctacaag
agcgtcttctgtccagagacctcagatgatgagaaaaaagacctggctacccagcacagg
attcgggcattacactgggtcaccattcagatgttgtgtgttcctgtggatgaagagatc
cctgaggtctctgatagtgtagtcaaagccatcactgatatcattgagatggaccctaag
cgtgtgcccagggataaactggcctgcatcaccagttgcagcaagcatatattcagtgcc
atcagggtcaccaagaacgaaccagcttctgcagatgacttccttcccaccctcatctat
attgtgttgaaggccaacccgccacggctgcagtccaacatccagtacatcacacgtttc
tgcaacccttcaagactcccggcttga
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