Sinocyclocheilus grahami (golden-line barbel): 107589582
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Entry
107589582 CDS
T04918
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sgh03012
]
107589582
Enzymes [BR:
sgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107589582
Translation factors [BR:
sgh03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107589582
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
RWD
HA2_C
zf-CCCH_4
HA2_N
zf-CCCH
nSTAND3
AAA_19
DEAD
NB-ARC
ATPase_2
UBA
AAA_14
ATPase
oligo_HPY
Motif
Other DBs
NCBI-GeneID:
107589582
NCBI-ProteinID:
XP_016133553
LinkDB
All DBs
Position
Unknown
AA seq
1240 aa
AA seq
DB search
MSGRRRSKPNRGGGRFNKPRGGGGGGGGGSRKAASGDWDDGDDFSLDLGPSQSFKPPSSR
GSRGVRGARGGTARGRSQALPRKHDEDEKRSRFRPEQVQLPLQKIHMTSANKLQVKELLW
ELQSQEYQTPNSGSDYEGGEEEEDEEEECDELDRREEGQFWQTHDDGVERAESDVWMEDS
VEEKHTKPEPVISLFALGTLCRYGFDRERCRQALEAGEESGRGEVGATLELLLSQMFTER
FGSSALRPQTSELPSQEECVALRQEEALALTAIYGDRFCERISSRVWTIQLDLLWLDESQ
NKISDSSNCKKQSGSNQVCKFYLKGAGCKFGNRCKFKHQTCESSSSRDFCKASQPGFSST
EAPVYQLEIRFQPCSLYPFQAPLVAFSSTNESLSGAGRLSVTEHLFDQSLSAAQEGQPVV
YTLVSCLEEDGPARELLSAGHHKYSAPPPVLTPPTVTPARNRSSRNTVANSITTDKAARD
QSNNTTESTHHRVRQKEDASYLRQDIDDEQEDGDDDDKEDEEECIPVENESYVNLRKRMV
KKSEIKTEQILQESKKLCREFKKKQSSRRYTSMQEQRQKLPAWQKREAILECLDKNQVLV
ISGMTGCGKTTQIPQFILDDFLQTGRQDRVPNIICTQPRRISAIAVATRVAQERAEALGH
STGYQIRLETVREQQAVFTRPPEGATKIIISTNIAETSVTIDDVVYVIDSGRMKEKRCVV
YPLHSSLSNEEQQAVFTRPPEGATKIIISTNIAETSVTIDDVVCVVYPLHSSLSNEEQQA
VFTRPPEGATKIIISTNIAETSVTIDDVVYVIDCGRMKEKRYDASRSMESLEDVWLSRAN
ALQRKGRAGRVASGVCFHLFTSHRFTHHLSQQQLPEIQRVPLEQLCLRVKVLEVFAERSL
ESVFSQLIEPPTEGSLEASKQRLCALGALTDKESLTPLGWHLACLPVDVRIGKLMLLGAI
FRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLGFSLANSDHLALLQAYKGWCNATQS
GFKAGYQYCRENFLSIRGLQEIACLKRQFAELLSDIGFVKDGLKARVIEKMSSKGSDGVL
EATGYEANLNSDNTKLMSAMLCAALYPNVVQVRSPQGKYKLTSKGAMKMQPKAEELRFMT
KSDGAVHIHPSSVNFSVRHYDSPYLVYHEKVKTSRVFLRDCSMVCVYPMVLFGGGQVSVE
LQRGEFIISLDDGWIKFAAVSHEVKQTCTRILQWRAVTFF
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaggaggagaagcaaacccaatcggggtggaggacggttcaataaacccaga
ggtggaggaggaggaggaggaggaggaagcaggaaagctgctagtggagattgggatgat
ggagatgatttcagcctggatttgggtcccagtcagtcattcaagcctccctcatctaga
ggttcaagaggtgtccgtggggctcgtggaggaaccgccagaggaagatctcaggcactg
cccagaaagcatgacgaggatgagaagagatccagatttagacccgagcaagtgcaactg
cccctgcagaagatacacatgacgtcagcgaacaagctacaggtcaaagaactgctgtgg
gagcttcagagccaggagtatcagacgccaaatagcggctcggactatgaaggtggtgag
gaggaagaggacgaggaagaggagtgtgatgagctggaccgtcgtgaggaagggcagttc
tggcaaacccatgatgatggagtagaacgtgccgagagtgacgtctggatggaggactcg
gtcgaggagaagcacacaaagccagagccggtgatctccctgtttgctctgggcactctt
tgcagatatgggtttgaccgtgagcgctgtcgacaagctttggaggctggagaagaaagt
ggacgtggtgaggttggagcgacattagagctcctcctatcccagatgttcacagaacgt
tttggctccagcgccctcagaccccaaacatccgagctcccttctcaggaggaatgtgta
gctttgcgacaggaagaggccctcgctttgaccgcaatctacggggatcgcttctgtgag
cgcatcagcagtcgtgtttggactattcagcttgatttgctgtggttggatgaaagtcag
aacaaaatttcagactcttcgaattgtaaaaagcaatcaggatccaatcaggtttgtaag
ttttacctgaagggggcaggttgtaagtttggaaaccgctgcaagttcaagcaccaaact
tgtgaatcgagctcttccagagatttttgtaaggcaagtcaaccggggtttagcagcaca
gaagctcccgtttaccagctggagattcgtttccaaccatgtagtttatatccttttcaa
gctccgctcgtggccttcagtagcaccaatgaatcgctctcaggcgcgggacgcctcagt
gtcacagagcacctgttcgatcagtcactcagtgctgcgcaggaaggacagccggtggtc
tacaccctcgtttcctgtctggaggaggacggacctgccagagagctgctgtcagctggc
catcacaagtacagtgctccgccccctgttctgactccacccactgtcactccggccagg
aatcggagtagcaggaacacggtagccaacagcattacgactgataaagcagctagggat
caatcaaacaacaccaccgagagcacacaccacagagtgagacaaaaggaagatgcgtca
tacctaagacaggatattgatgatgaacaagaagatggtgacgatgatgataaagaagat
gaggaggaatgtatcccagtggaaaatgagagctatgttaacttgaggaagaggatggtg
aagaagagcgagatcaaaactgagcagatactgcaagagagcaagaagctctgcagagag
ttcaagaagaaacagtcatcgaggcgctatacatcgatgcaggagcagaggcagaagcta
cctgcatggcagaagagagaggccatattggagtgtttggataagaaccaggttctcgtc
atcagtgggatgactggatgcgggaaaaccactcagatccctcagtttatcctggatgat
ttccttcagactggacggcaggatagagtgcccaatattatttgcactcagccacggcga
atctctgccattgctgtggcgacccgagtggcccaggaacgagcagaggccctgggtcac
tctacaggctatcagatccgtctggagaccgtcagggagcagcaggcggtctttacccgc
ccacccgagggtgcgaccaaaatcatcatctccaccaacatcgctgaaacttctgtcacc
attgatgatgtggtgtatgtcatagactctggccggatgaaggagaagaggtgtgtagtg
tatcctctacactcatccctgtccaatgaggagcagcaggcggtctttacgcgcccaccc
gagggtgcgaccaaaatcatcatctccaccaacatcgctgaaacttctgttaccattgac
gatgtggtgtgtgtagtgtatcctctacactcatccctgtccaatgaggagcagcaggcg
gtctttacccgcccacccgagggtgcaaccaaaatcatcatctccaccaacatcgctgaa
acttctgttaccattgacgatgtggtgtatgtcatagactgtggccggatgaaagagaag
cggtacgatgctagtcgcagtatggagagtctagaggacgtgtggttgtctcgtgccaac
gctcttcagagaaaaggccgtgccggtcgtgtggcgtcaggtgtctgcttccatctgttt
acgagccatcgcttcacacaccacctgagccaacagcagctgcctgagatccagagagtt
cctctggagcagctctgtctaagggttaaggtgttggaggtgtttgcagagcgttctctg
gagtcagttttctctcagcttattgagccgcccactgaaggcagtctggaggcctctaaa
cagcgcctgtgtgccctgggcgccctgacagacaaggagtctctgactcccctcggttgg
catttggcctgtctgcccgtcgacgtccgcatcggtaaactcatgctgctgggagccatc
ttccgctgcctggaccctgccctcaccatcgccgccagcctggccttcaagagtccattc
gtgtctccatgggataaacgagaggaagctaatgagaagaagttggggttctctctggcg
aacagtgaccatctagctttgctgcaggcatacaagggttggtgtaatgcaacacaaagc
ggatttaaggctggttaccagtactgcagagagaacttcctctcgatccggggcttacag
gagatagcatgtcttaaaaggcagtttgcagagcttctgtctgacattggctttgtgaag
gatggactgaaggccagggtcattgaaaaaatgagctcgaaaggaagtgatggggtgcta
gaggccacaggctatgaggccaacctgaactctgataacacaaagctgatgtcagccatg
ctgtgcgcagctctctaccctaatgtagtccaggtgagatctcctcaggggaagtacaag
ctcactagtaaaggtgctatgaagatgcagcctaaagcagaggaactgcgcttcatgacc
aagagtgatggagccgtccacatacacccctcatctgtcaacttctctgtgcggcactat
gacagcccatacctggtgtaccatgagaaagtgaagaccagtcgagtgtttctgcgtgac
tgtagcatggtgtgcgtgtatcccatggtgctgttcggtggggggcaagtgagcgtggag
ctgcagcgtggagagttcatcatctctctggatgatggctggatcaaatttgctgctgtg
tctcatgaggtaaagcagacttgcactagaatattacagtggcgtgcggtgacttttttt
taa
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integrated database retrieval system
