Sinocyclocheilus grahami (golden-line barbel): 107589708
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Entry
107589708 CDS
T04918
Name
(RefSeq) pre-mRNA-processing-splicing factor 8-like isoform X1
KO
K12856
pre-mRNA-processing factor 8
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107589708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgh03041
]
107589708
Spliceosome [BR:
sgh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107589708
Complex C
U5 SnRNP specific factors
107589708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
107589708
NCBI-ProteinID:
XP_016133690
LinkDB
All DBs
Position
Unknown
AA seq
2364 aa
AA seq
DB search
MIRHSAEHKPSTQLHLLAIHAAMAAAFPYRGVPGTMPPGVPPPPPAVAPVPDYMTEEKLQ
EKARKWQQLQAKRYSEKRKFGFVDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGA
LKYMPHAVLKLLENMPMPWEQIRDVPVLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMM
RREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEAIQMELDPEEDSSVAEWLYEHK
PLKDTTKYVNGTTYRRWQFTLPMMSTLYRLANQLLTDLVDGNYFYLFDLKAFFTSKALNM
AIPGGPKFEPLVRDINLQDEDWNEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTW
YHTPNVVFIKTEDPDLPAFYFDPLINPISHRHSVKSQEPLPDDDEEFELPEYVEPLLKET
PLYTDNTANGIALLWAPRPFNLRSGRTRRAIDVPLIKNWYREHCPAGQPVKVRVSYQKLL
KYYVLNALKHRPPKAQKKRYLFRSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRK
NLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDA
FQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWA
SGWRVWLFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMH
DILDMMPEGIKQNKARTILQHLSESWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWT
NTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYT
TTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAY
DNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEAD
KRRLFPPWIKPADTEPPPLLVYKWCQGINNLQDVWETAEGECNVMLESRYEKMYEKIDLT
LLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVHYYGLVMDLL
VLGLHRASEMAGPPQMPNDFLSFQDTVTESAHPIRLYCRYIDRIHIFFRFSADEARDLIQ
RYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTIQWE
NSFVSVYSKDNPNLLFNMCGFECRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLR
VDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKC
ENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGIT
HFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDS
WDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYR
TDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPN
RRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVM
DLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDV
MDSTTTQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNL
HSAYGNWFPGGKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEL
FSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQK
RLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQL
PFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAK
VILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDII
LGMEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKT
EWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGT
SPPDNPQVKEIRCIVMVPQWGTHQTVHLPNQLPQHEYLKEMEPLGWIHTQPNESPQLSPQ
DVTTHAKVMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGY
LPSHYERVQMLLSDRFLGFFMVPGQVSWNYNFMGVRHDPNMKYDLQLSNPKEFYHEVHRP
SHFLNFASLQEGEIYNADREDMYA
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgatacgccattccgctgagcacaaacctagcacacaactacatttactggcgatacac
gctgccatggcagctgcattcccctacagaggtgtacctggaacaatgcctccaggtgtt
cctccacctcctcctgctgttgctccagtaccagattacatgactgaggagaaactgcaa
gagaaagctcggaaatggcagcagcttcaggccaaacgctactcagagaagaggaaattt
ggctttgtggatgctcagaaagaggacatgccacctgagcatgtgcgcaaaatcatcagg
gatcatggtgacatgacaaacaggaaatttcgtcatgacaagagggtctaccttggggcc
ctgaaatatatgccccatgcagtgctcaaactgctggagaacatgcccatgccctgggag
caaatcagagatgttcctgtgctctaccacatcacaggcgccatttcctttgtaaatgaa
atcccatgggtgattgagccggtgtacattgctcagtggggcacgatgtggatcatgatg
cgtcgtgagaagcgagacaggcggcacttcaagcgcatgcgtttccccccatttgatgat
gaagagcctccgttggactatgcggacaacatcctggatgttgagcctcttgaggcgatc
cagatggagctggaccctgaggaggactcctctgttgcagaatggctttatgagcataaa
cctctgaaagataccacaaaatatgtgaatgggaccacatacagacgctggcaattcaca
ttaccaatgatgtccactctgtatcgattggctaatcagttgctgacagacttggtggat
ggaaactacttctacttgtttgacttgaaggctttcttcacctctaaagcattgaacatg
gccattccggggggacccaaatttgagccacttgtcagagacattaacctccaggatgaa
gactggaatgaattcaatgacatcaacaagatcatcatcagacaaccaatcaggacagaa
tacaaaattgcattcccttacttatacaacaacctgccacatcatgtgcacctcacctgg
taccacacaccaaacgtggtgttcatcaagactgaggatcctgatttgcccgccttctac
tttgaccctctgatcaaccccatctcccataggcactctgtcaagagccaagagccactg
ccagatgatgatgaggagtttgaactgcctgagtatgtagagccattactgaaagagacg
cctctctacactgacaacacagctaatggaattgcgctgttgtgggcgcctcgtccattt
aatctccgctctggaagaaccagacgggccatcgatgtgcctcttatcaaaaactggtat
cgtgagcactgtcctgcaggccagcctgtgaaggtgcgtgtgtcttaccagaagctcctg
aagtactacgtgctgaatgcgctaaaacacagaccacctaaggcacagaaaaagagatac
ctgttccgctctttcaaagccaccaaattcttccagtcaacaaagctggattgggtagaa
gtcggtctccaggtgtgccggcagggctacaacatgctgaacctgctgattcacagaaag
aacctcaactaccttcacttggactacaacttcaacttgaagcctgtgaaaaccctcacc
acaaaggaacgtaagaaatccagattcgggaacgcgttccacttgtgccgtgaggttctg
cgtttgagcaagcttgtggtggacagtcatgtgcagtacaggcttggaaatgttgacgct
ttccagctggcagatggactgcagtacatcttcgcccatgtcggtcaattgactggcatg
taccgctacaagtacaagctcatgaggcagattagaatgtgcaaagacctgaagcatctc
atctactaccgcttcaacacaggtccagttggaaaaggtccgggctgtgggttctgggct
tcaggatggagagtctggctgttcttcatgagaggcatcacacctcttctggagcggtgg
cttgggaatcttctggccaggcagtttgagggtcgacactccaagggtgttgcaaagact
gtgaccaaacagcgtgtggaatctcacttcgatctggagcttagagctgctgtgatgcat
gacattctggatatgatgcctgagggtatcaagcagaacaaggccagaaccatcttgcag
catctcagtgagtcatggagatgctggaaggccaacatcccttggaaggttcctgggctt
ccaacacccattgagaacatgattcttcgctacgtgaaggccaaagctgactggtggacc
aacacagcccactataaccgtgaaagaatcagaagaggagccactgtggataagactgtg
tgcaagaagaacctgggacgtctcactcgactctatctaaaggcggagcaggagagacag
cacaattacctgaaggatggaccttacatcacagctgaggaggccgtggccatctacacc
accacagtgcactggctggagagtcgtcgtttctctccgatccccttccctcctctctct
tacaaacatgacactaagctgctcatcctggctttggagagactcaaggaggcttacagt
gtgaagtcaaggctgaaccagtcacagcgtgaggagttaggtctgattgagcaggcctat
gacaaccctcatgaggctctgtcaaggatcaaacgtcacctcctcactcagagagccttc
aaagaggtgggcattgaattcatggacctttacagtcacttggtgccggtttatgatgtt
gaacccctggaaaagatcactgatgcatacctggatcagtacctctggtatgaggcagac
aagcgcagactttttccaccctggatcaaaccagctgacacagagccacctccactgctg
gtgtacaaatggtgccaaggaatcaacaacctgcaggatgtgtgggagacggcagagggc
gaatgcaatgtcatgctggagtctcgctatgagaagatgtacgagaagattgacttgacg
ctgctgaacaggcttctgcgtctcattgttgatcacaacattgccgattacatgacggcc
aaaaacaacgttgtcattaactataaggacatgaaccacacaaattcgtacggtattatc
cgcggcctgcagtttgcctctttcatcgtgcattactatggtttggtgatggacctgctg
gtgctgggtctacacagagccagtgagatggctggacctcctcagatgcccaatgacttt
ctcagcttccaggacacggtcactgagagtgcccatcctatacgcctttactgcagatac
atagaccgcattcacatcttcttcaggttctctgctgatgaggcgagagatctgatccag
aggtacttgaccgaacacccagaccccaacaatgagaacattgtgggctacaacaataag
aaatgctggccaagagatgctaggatgagactgatgaaacatgatgtgaacttgggccgt
gctgtgttctgggacatcaagaatcgcctgcctcgttctgtgaccacaattcagtgggag
aacagctttgtgtctgtgtacagcaaggacaaccccaacttactcttcaacatgtgtggc
tttgagtgtcgcatccttcccaagtgccgcactagttatgaggagtttacgcacaaagat
ggtgtgtggaatttgcagaatgaggtaacaaaggaaaggaccgcacagtgtttcctgcgt
gtagatgatgagtcaatgcagaggttccacaacagagtgcgacagattctgatggcttct
gggtccaccaccttcacgaagattgtgaacaagtggaacactgctctgattggtctgatg
acatacttccgtgaagccgtggtcaacacccaagagcttttggacctgctggtgaagtgt
gagaataagatccaaacccgtatcaagattgggttgaactccaaaatgcctagtcgtttc
cctcctgtggtgttttacacccctaaggagttgggtggactgggaatgctttccatggga
cacgtactgattccacagtctgaccttaggtggtccaaacagaccgatgtgggcatcact
catttccgttccggtatgagtcatgaggaggatcagctgattcctaatctgtaccgctac
atccagccatgggagagcgagttcattgactcccagagggtttgggccgaatatgctctc
aaacgacaggaggccattgctcagaacagacgtttgacactggaagatctggaggactcc
tgggacagaggtattccacgtattaacacactcttccagaaggacagacacactctggct
tatgacaagggttggagagtcagaacagacttcaagcagtaccaggtgttgaagcaaaat
ccattctggtggactcaccaaaggcatgatgggaaattgtggaatttaaacaactaccgt
accgacatgatccaggctcttggaggagtggaaggcattcttgaacacacgctcttcaag
ggaacctacttccccacctgggagggtctcttctgggaaaaggccagtggtttcgaagag
tccatgaaatggaagaaactcaccaatgctcagagatctggtctgaaccagattcctaat
cgacgattcaccttgtggtggtctcctacaatcaacagagccaatgtatacgtgggtttc
caggtgcagttggacctcactggaatcttcatgcatggtaaaatcccaactctcaagatc
tctctgatccagatcttcagagctcacttgtggcagaagattcatgagagcgtcgtcatg
gatctctgtcaggtgtttgaccaggagctggatgctttggagattgagacagtccagaaa
gagacaatccatcccaggaagtcttacaagatgaattcctcctgtgctgacattctgttg
tttgcctcctacaagtggaacgtctctcgtccctcgcttctagcagactccaaggatgtt
atggacagcaccaccacgcagaagtactggattgacattcagctcagatggggtgactac
gactctcatgacattgagcgatatgccagggccaagttcttggattacaccactgacaac
atgagtatttacccatcacccactggagtgctgattgccattgatctggcatacaacctt
cacagtgcttatggtaactggttccctggaggtaagcccctgatccagcaggccatggcg
aagataatgaaggccaacccagcactgtatgtgctgagagagcgaatccgcaagggtctg
caactctactcttcagagcccactgagccttacctgtcttcccagaactacggagagctg
ttctccaaccagatcatctggtttgtggatgacaccaatgtgtatagagtcaccatccac
aagacctttgaaggaaacttgaccacaaaaccaatcaacggagccattttcattttcaac
cccagaactggacagcttttcctaaagatcattcacacatctgtatgggcaggacaaaag
cgtcttgggcagctagctaagtggaaaactgctgaagaagtggctgccctgatccgatcg
ctgcctgttgaagagcagcccaagcagattattgtgaccaggaagggcatgttggatcct
cttgaggtgcacttgctggacttccccaacattgtaatcaagggctctgagctccagcta
cccttccaggcctgtctgaaagtggagaagtttggagacctcattctgaaggccacagag
cctcaaatggtcctattcaatctgtatgacgattggctgaagaccatctcctcttacact
gcattctctcgtttgatcttaatcctgagagcacttcatgtgaacaatgaccgtgccaaa
gttatcctgaagcctgacaagaccacgatcaccgagccccaccacatctggcccactctg
accgatgaggagtggatcaaagtggaggtgcagctcaaagatctcatcttggctgactat
ggcaagaagaacaatgtgaatgtggcatctttgacccagtctgaaatcagggacatcatc
ctgggtatggagatctctgctccatcccagcagagacagcagatcgctgagattgagaag
cagaccaaagagcagtctcagctaacagccacacaaactcgcactgtcaacaaacacgga
gatgagattatcacctccaccaccagcaactacgagacgcagaccttctcttccaaaacc
gaatggagagttagggcgatctctgctgccaacttgcacttacgtactaaccacatctac
gtgtcatcggatgacatcaaagaaactggctacacttacatcctgcccaagaacgttctg
aagaagttcatttgcatctcagatctgcgtgctcagattgcaggttacctgtatggaacc
agtcctccagataaccctcaggtaaaggaaatccgctgcattgtgatggtgccacagtgg
ggtacacatcagaccgttcacctgcccaaccagctgccacaacatgagtacttgaaggaa
atggagcctcttggatggatccatacacagcccaatgaatcgccccagctctctcctcag
gatgtaaccacccatgcaaaggtcatggctgacaacccatcctgggatggcgagaagact
atcattattacttgcagtttcacccctggttcctgcacgctgacggcctacaagctgact
cccagtggatatgagtggggtcgacaaaatacagataagggaaataaccccaaaggttac
ttgccctctcactacgaaagagtccaaatgcttttgtctgaccgtttccttggcttcttc
atggtgcctggccaagtctcctggaactacaacttcatgggtgttcgccatgatcccaac
atgaagtatgacctacagttgtccaacccaaaagagttctaccatgaagttcacaggcca
tctcacttcctcaacttcgcttctctgcaggagggtgaaatctacaatgctgaccgtgaa
gatatgtatgcataa
DBGET
integrated database retrieval system
