Sinocyclocheilus grahami (golden-line barbel): 107590507
Help
Entry
107590507 CDS
T04918
Name
(RefSeq) AT-rich interactive domain-containing protein 2-like isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107590507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107590507
03021 Transcription machinery [BR:
sgh03021
]
107590507
03036 Chromosome and associated proteins [BR:
sgh03036
]
107590507
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Helix-turn-helix
ARID
107590507
Transcription machinery [BR:
sgh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107590507
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
107590507
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
Motif
Other DBs
NCBI-GeneID:
107590507
NCBI-ProteinID:
XP_016134758
UniProt:
A0A672T8W4
LinkDB
All DBs
Position
Unknown
AA seq
1607 aa
AA seq
DB search
MANSTGKNLPVQRRKGQAFLDELRQFHHSRGSPFKKVPVVGGKELDLGALYMRVVSLGGF
AKVSDKNQWAELSEDFNFPRSCSNAAFVLKQYYLRYLEKYEKVHHFGEEDEEEQPGNPKH
LLPIGAIPTSYNYQQHTVSDYLRQSYGLSTDFVPPSDYNKLVLSLLSGFPNEVDFAINVC
TLLSNESKHAMQLEKEPKLVTLLLAHTGVFDDSLGSFSALFGTDWQEKTSRDFVRFWKDV
IEDNEVKDLISDKSCTPQNVLKTRDVCTPLFHPARAVGIGDVEGQRVLQVAMILRNLSFE
EANIKLLAANRTCLRFLLLCAHCTFIQLRQLGLDTLGNVAGELQLDPVDFRTTHLMFHTI
TKCLLSRDRFLKMRAMEILGNLSKVEDNGVLICEYVDQESYREVIALLTLPDVMLVISAL
EVLHQLAELGEITCSKISSVERSIDLLVRLVSVDLHMFGPDALTAVKLIEHQASSSQVSE
VRPQLVEHAPPPTQGTPGAVNRAPVQSTPPPGIVEVDGEKFTTQWLNSHFEVHPDGSVSR
SEMYSDYLATCSKMARGGVLTSNNFYKCLRTLFPNHTVKRVEDTRLSGQAQIHVVGVRKR
PIPLPVQLYYQQQQASPAPVPKHETPSETPQPLSVLPPGVGGQLVRAPALSLNAGQAAPL
VAFTMHGTSHANAPNAPAPAPTVPRLPMNPPGQAALPPPFPPATAPVPIRPNDILKTAMI
QSSIPTATAAPAAPNHSGSPIQQPLLHHAPVTLIQQGPPPQGHVFTGRVRSVCPSVAQQR
MQAPQGQQGAPSQEAVVLAQPQYVSAPCTPLMAGGQVMTVSGMTSNRVTFQNIAPKPAPQ
AQSPQPQPQQQQQQSLVIVSQNQQPNTAFAPAIHQIVLTNPSPQTIQPQPTQSPASPNAP
TPNPAPMQQAPPNTVSHMLSVKRQFQQTPPPPPPPAQPTSTESSLIKQLLLPKRGPSTPG
GKLILPAPQVPAPVSTRAPSPQVIYQVTNSGPVASQPQLNVQLMQSPLQATGAVPISILP
GQIISTSTPGTLLQATPSNQVTFTVVPNSGFPGQGAQTPPTINLQLTPPLPIAGATPIQP
FRGDKIICQKEEAAKDATGLHVHERKIEVMENNSVTDGSAKASNGESAEVDGPAAKLLNG
RKFDSSLPPYHSGNSQAEVLNGPVAQGSDSGGPGKQTPSDPKKLMVNGVCDFDRSDATHP
SKNIPNHKASKHMGNGEVLSPQKAHGPFGLKDSLAAPQQDTAKAEQAERLANGPSHGTEI
SNGPSSETLGLRQQHPPHNHSPPPPVSEPAPPLPPANGTSESRPLKRPLEDGDRGTSGIP
TKMGVRIVTISDPNNAGNCATMVAVPVGADPSTVAKVAIENAAQQRPSVPSPLPETNAQQ
PVSVQTPPPVDPAAQGTNQSSPAPALSPDQARKPGQNFRCLWKACKRWFDTPSQVFYHAA
TYHGSKDMYPGQCQWEGCEPFPRQRLSFITHLQDKHCSREALTAALKLEEQTQGTSKSPP
AAVSSPPPPPRPQKALVNHPSAALMALRRGSRNLVFRDFTDDKEGPMTKHIRLTAALTLK
SIAKYSDCGRKLVRRHENHLSVLALSTMEVSTTLAKCLYELTRSLQA
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactcgacggggaaaaacctccccgtgcagcggaggaaaggacaggctttcctg
gacgagctgcggcagtttcaccacagcagaggatctccgtttaaaaaggttcccgtagtg
ggtgggaaggagctggacctgggcgctctgtatatgagagtggtgtctttagggggcttc
gcgaaggtgtccgacaagaaccagtgggccgaactgagcgaggatttcaatttccccagg
agctgctcgaatgctgcttttgttttgaaacagtactaccttcgctatttagagaagtat
gaaaaggtgcatcattttggagaggaagatgaagaggagcagccggggaatcctaaacat
ttgcttccgattggtgcaatacccacgtcatacaactaccagcaacacactgtatcagac
tatctccgccaaagctatgggctgtcgacggatttcgtccctccatccgattacaacaaa
ctggtgctgtctctcctgtctgggttcccaaacgaggtggacttcgccattaacgtgtgc
acgctcctgtccaacgagagcaagcacgccatgcagctagaaaaagagcccaaactcgtc
acgctgctgctggcgcacacgggagtcttcgacgactcattaggcagcttttctgctcta
tttgggacagactggcaggagaaaacgtcacgggactttgtgaggttttggaaagatgtc
attgaagacaatgaagtaaaagatctcatctcagacaagagctgcacaccccaaaacgta
ttgaagacgagggatgtctgcactcctctctttcacccggcacgtgccgtaggcatcgga
gacgtcgagggccagcgggtgttgcaggtggcaatgattctgaggaacttgtccttcgag
gaggccaacatcaaactcctggcagctaatcgcacatgtctgcgcttcctcttactgtgt
gcgcattgcaccttcatccagctgcggcagctgggtctcgacacactcggcaacgtcgcc
ggagagcttcagttggatcccgttgatttccgaacaactcatctgatgtttcacaccatc
acgaagtgtttgttgtcacgggatcgttttctcaaaatgagggccatggaaattctcggg
aacctgagcaaagtggaggataacggcgttctgatctgcgagtatgtggatcaggagtcg
taccgagaagtcatcgccctcctgacgctgccggacgtcatgctggtcatctccgcgctg
gaggtcctgcaccagctggcagagctcggggagatcacgtgctctaaaatctcctccgtg
gagagaagcatagatcttctggtgcggttggtgtcagtggatctccacatgtttggaccg
gacgccttgacggcagtaaaactcatcgagcatcaggcctcgagcagtcaggtctcagag
gttcggccgcagcttgtcgagcacgctcccccacccacgcaaggcactcctggcgctgtg
aacagggcgcctgtgcagtctacgcctccgcctgggattgtggaagtagatggagagaaa
ttcacaactcagtggctaaattctcatttcgaggttcatccagatggttcggtctctcgc
tctgagatgtactctgattatctggcgacctgcagcaagatggcgcggggtggagtgtta
acatccaataacttctacaaatgcctgaggacgctgtttcctaatcacacggtgaagcgt
gtggaggacacacggctgagtgggcaggctcaaatccatgtggttggtgtgcggaagagg
ccgattcctcttcccgtccagctttattatcagcagcagcaggccagtcctgcaccagtt
cccaaacacgaaaccccctcagaaacccctcagcccctgtcagtgctgcctcctggtgtg
ggagggcagcttgttcgggcaccagcactaagccttaatgccggccaggcagcaccactg
gtggccttcaccatgcacggtacgtcgcacgccaacgctcccaatgctcctgcgccagcc
ccgactgttccacgactccccatgaaccctccaggacaagctgcacttcctcctccattc
cctcctgccactgccccagttcccatacgacccaatgacattctcaaaacagccatgatc
cagagctctatccccaccgccactgctgcacctgctgctcccaaccacagcggctcacct
atccagcagcccctgctccatcacgctcccgttacactgatccagcagggaccgccgccc
cagggacacgtatttacaggtcgagtgcgaagtgtttgtccttcggtggcccaacagcgc
atgcaagcccctcagggacagcaaggtgccccttcccaagaggctgtggtgctcgcgcag
cctcagtatgtcagtgctccttgcactccgctgatggcaggagggcaggtcatgactgtc
tcaggcatgactagcaaccgcgtcacatttcaaaatatcgcccccaaacctgcaccacaa
gcccagtcgccacagcctcaacctcaacagcagcaacaacaaagcttagtcatcgtcagt
cagaatcagcaacccaacactgcatttgccccagccatccatcaaatcgtactgaccaac
cccagtccacaaaccatccaaccgcagcccacgcagtctcccgcttccccaaatgcaccg
acccccaaccccgcccccatgcagcaagccccacccaacacagttagccatatgctgtct
gtcaagcgccagtttcagcagactccgccccctcctccacccccagcccaacctacctcc
acagaatccagtctgatcaaacagttactgcttccgaaacgcggtccttccaccccaggt
ggaaaactcatactccccgcaccgcaagttcccgctcctgtgagcaccagagcgccaagc
ccgcaagtcatataccaggtgacgaacagcggtccggtggcgtctcaaccgcagttaaac
gtgcaacttatgcagagccccttgcaggcgaccggtgccgttcccatctccatcctccca
gggcagataatttccacttccacccctggcacccttctgcaggctacacccagcaaccaa
gttaccttcacagtagtgccaaactctggcttccctggccagggagcgcagaccccaccc
acaatcaacctgcagttgactccacctctgccaattgctggagccacgcccattcagcct
ttccgaggtgacaaaatcatctgccaaaaggaggaggcggccaaggacgccacggggctg
cacgtccacgagcgcaagatcgaggtcatggagaacaactccgtcaccgacggttcggcc
aaagccagcaatggtgaatccgcagaggtggacggacctgcggccaagctgctcaatggg
aggaagtttgactcgagtctacctccataccactcagggaacagccaagcagaggtgttg
aacggccctgtggcgcaaggcagcgacagcggcggccctgggaagcagacgccctctgat
cctaaaaagctaatggtaaacggggtgtgtgactttgatcgatcggacgccacccatcca
agcaaaaacattccaaatcacaaggcttccaaacacatggggaacggtgaggtgttgtcg
cctcagaaagcgcacgggcctttcggcctcaaggactctcttgctgctcctcagcaggat
actgccaaagcagagcaggccgaacgcctggccaatgggcccagccacggcactgagatc
tccaacggccccagctcagagacattgggcctgaggcaacagcacccacctcataaccac
tccccacctccgcccgtttccgagccggctcccccgctgcctcccgctaacggcacctcg
gagagccggccgctgaagagaccgcttgaggacggggacagaggtacctctggaatcccc
accaaaatgggcgtacggatagtgaccatcagcgaccccaacaatgctggtaactgcgcc
accatggtggccgtgccggtgggcgcagacccaagcacagtagcaaaagtagcaatagag
aatgcagcgcagcagagaccaagtgtgccctcgccgctccctgaaaccaatgctcagcag
cctgtgtcagtgcagactccgcctccagtggatccggctgcacagggaaccaatcagagt
tctccagcacccgccctctctccagatcaagcacgtaaacctggacagaacttcagatgt
ctgtggaaggcatgcaaacggtggtttgacacgccatcacaggtgttttaccatgcagct
acctatcatggcagtaaagatatgtacccagggcagtgccaatgggagggctgtgaacct
tttcctcgccagagactatccttcatcacacacctgcaggataagcactgctcgagggaa
gcgctcacagctgcactcaaactggaggagcaaacgcaaggcacttccaagtctcctcca
gcggccgtcagcagtcctccgcctcctcccagaccacagaaagcgcttgtcaaccacccc
agtgcagctctgatggctttacgcaggggctcacggaacctggtgttcagggacttcaca
gacgataaagagggaccaatgaccaaacacattagactaactgctgccttaacattaaag
agcatcgccaagtactcagattgtggacggaagttggtaaggcggcatgaaaatcatctc
tctgtgctggcgctgagcactatggaggtctccaccacgctcgcgaaatgcctttacgaa
ctcacacgctctctgcaggcctga
DBGET
integrated database retrieval system
