Sinocyclocheilus grahami (golden-line barbel): 107591016
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Entry
107591016 CDS
T04918
Name
(RefSeq) protein scribble homolog
KO
K16175
protein scribble
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
107591016
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_9
LRR_LRWD1
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
107591016
NCBI-ProteinID:
XP_016135498
LinkDB
All DBs
Position
Unknown
AA seq
1848 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCSLTAVPDEIYRYNRSLEELLLDANQLRELSKPFFRLHN
LRKLGLSDNEIQKLPPDVANFTQLVELDISRNDISEIPENIKFCQALEIADFSGNPLSRL
PDGFTQLRGLAHLSLNDVSLQSLPNDIGNLSNLVTLELRENLLKSLPSSLSFLVKLEQLD
LGSNVLEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRQLVCLDVSENRLSELPTEIS
GLIALTDLLLSENLLEVLPDSIAAVLQSSAPTLILKVNQNRLVHLTDSIGECENLTELML
TENLLQSLPRSLGKLKKLTNLNVDRNCLSSVPAELGGCVSLNVLSLRDNRLGKLPAELAN
ATELHVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDDEQTGEKVLTCYLL
PQQPSSSLENLLDRSVDETWPTDTNLNRVSVIQFQDDSKHEEEDEETAAEKRQGLQRRAT
PHPSELKVMKNVIEARRNDAYTAKPDEDLESPDSEQKRLSGLSNQSHGSQASSSTASATS
QDEKRGVNSTGVEINDGQGQEEEELDEMEVEYTEPTVHFAEEPIIRGDDEEEEDENEEDE
DAERSDEDSRTPPFPAEKQRLIRKDTPHYKKHFKITKLPKPETVAALLQGFSHDGLSPTA
HTPEDERDGEEEEDEQDEGGVIVNTPFQQRLEAAELEDSRLSQMNSSLQPVKGVSFDQVN
NLLIEPARIEEEELTLTILRQTGGLGISIAGGKGSTPFKGDDEGIFISRVSEEGPAARAG
VKVGDKLLEVNGVDLHGAEHHTAVEALRNSGTAVVMTALRERMVEPENAITTTPLRPEDD
YFPRERRSSGLPFLLDPASPAVSAGPTLRLATSLVRNDKGLGFSIAGGKGSTPYRVGDTG
IFISRIAEGGAAHRDNILHVGDRVISINGVDMTEARHDQAVALLTGTSPTITLLVERDQA
SAGGASPRTRPHSPPPPEPSDSPEQEEGDEHLGNHLNCPMEDEYPIEEVTLIKAGGPLGL
SIVGGSDHASHPFGINEPGVFISKVIPNGLASQSGLRVGDRILEVNTIDLRHATHQEAVR
ALLSNKQEIRMLVRRDPSPPGMQEIVIHKQPGEKLGISIRGGAKGHAGNPFDPTDEGIFI
SKVSSSGAAARDGRLRLGMRILEVGNNSLLGMTHTEAVRVLRASGDSLVMLVCDGFDPRN
AAGIEASPGVIANPFAAGIVRKNSMESISSVDRDLSPEEIDIMQKEVEMVRETSQWEREE
MEKVERMRLEREEATRLLEEETENLSTGPLKLDYKTLAALPTTSLQKVNRSSPSEPHGID
SPVRDAAHSPQNSQSNIHFPSNANTKDNSSTKPGAIQPLSRVRPAVSPASQDGHSSPNPF
QHGLSPINSQTTPSALSPDTHEEYPINIKQVYKAFAAVPHSLAVLEPPQDLYSPQNYVSA
KQPSPEPELNNEVFMDEADGEGSGPLRPRPPLSSDRREYRSLAAVPHLPRPSVEPKTPSS
VGRDSPEQRSFRDRQKYFEIDVKQQTPDKPKPRISLVGEDDLKKMKEEEAKLIEQRAQEY
MLDEDEEDEEEDLAKQVADMKAHGKVVLDGVEYKVESLGGHSSPSPRKCATPPSHCGGSG
KGDSQRNSMEDSFRLEQRPNSMTGLIPVYAGESVAPIRTAKAERRHQDRLRMQSPELAVT
MDKELSPAEKRALEAEKRAMWRAARMKSLEQDALKAQMVIAKSKEGKKRGTLDQLSESPS
PAPTPSPTPIEDISPRAVTSPGRLSLSEKKFDYRQFAAIPSSKPVYDIQSPGAGDDVHFM
DDASSNPVSVVDPEVPVATTSALEEMALYSNKRKLRQGRHSLEAPVPT
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatcccgctgtggcggtgtaaccgtcacgttgagtccgtggataagcgg
cactgctcgctcactgcggtgcccgatgagatctaccgctacaaccgcagtctggaggag
ctgctcctggacgccaaccagctgagagagctgtccaagcctttcttcagattgcacaat
ctgcgaaagctgggcctcagcgacaatgagattcaaaaattgccgcccgacgttgccaac
ttcacacagctggtggagctagacatctctagaaatgatatttctgagattcccgaaaac
ataaaattctgtcaggccttggagattgcagacttcagcggaaaccccttgtccaggttg
cctgatggcttcacacagctcagaggactggctcacctatcactcaatgacgtgtcactg
cagtctttacccaatgacattggaaacttgtcaaacctggtgactctagagctgagggag
aatctactgaaatctttaccctcctctctttccttcctggttaaactggaacagctggat
ctgggcagcaatgtactggaagttttgcctgacacacttggggcactgcccaatcttcgt
gagctttggttggacagaaaccagctctcctcactacctccggagctggggaacctgcgg
cagctggtttgcttggacgtgtcagagaaccgtctatcagagcttcccacagagatcagt
ggccttatcgccctcacagacctgctgctctctgagaacctcctggaagtcttgccggac
agcattgccgcagtcctgcagagttcagctccaaccctcattctgaaagtgaaccagaac
cgcttagtgcatctcacagactctattggcgagtgtgagaacctgacagagcttatgttg
actgagaaccttctccagtccctccctcgctcacttgggaagctgaagaagttgactaac
ttgaatgtggaccgaaactgcttgagcagcgtgccagcagaactgggaggatgtgtcagc
ctgaacgtgctctccctcagagataaccgtttgggaaaactacccgctgagctggccaat
gcaacagaattacatgtgctggacgtggcaggcaacaggttgcagaatttaccgttcgca
ttggccaatctgaacctgaaggccatgtggctggcagagaaccagtctcagcccatgctt
aagttccagacagaggacgacgaacagactggggaaaaagttctcacctgctacctgctg
cctcagcaaccctcatcgagccttgagaatctactggacaggagcgttgatgaaacctgg
cccacagacactaatttgaacagagtatcggtcattcagttccaggatgactccaaacac
gaagaggaagatgaggagactgctgcagagaagaggcagggtcttcagaggagagccaca
ccacatcccagtgagttgaaggtaatgaagaatgtcattgaagccagaagaaatgatgct
tatacagccaagccagatgaggatctggagtccccggactctgagcagaaacggttgagt
gggctgtccaatcaaagtcatggttctcaggcatccagtagcaccgcctctgccacttct
caggatgagaagcggggtgtaaacagtacaggggtggagattaatgatggtcagggtcaa
gaagaggaggagctggatgagatggaggtggagtatactgagcctactgtgcactttgct
gaagagcccatcatccgtggcgatgatgaggaggaagaagatgaaaatgaagaagatgaa
gacgctgaaaggagtgatgaggactctcgaacgccgccttttcctgcagagaaacagcgg
ctcatacgtaaagacacaccacactacaaaaagcacttcaaaatcaccaagctgcccaaa
ccagagactgtcgccgccctgctgcaaggcttcagtcatgacggcctctcacctactgct
cacacccctgaggatgagagggatggtgaggaggaggaagacgagcaggacgagggagga
gtaatagtcaataccccttttcaacaaagactagaagcagctgagctagaagacagcagg
ctgagtcagatgaactcatccctgcagccagtgaagggggtgtcatttgatcaagtcaat
aatctgctgattgagcctgctcgaattgaggaggaagagctgaccctgactatcctgagg
cagaccggtgggttaggcatcagcatagcaggggggaaaggatctacgccctttaagggc
gatgatgagggtattttcatctctagagtgtcagaagagggccctgcagctcgtgctggg
gtcaaagtgggagacaaacttcttgaggtgaacggagtagacctgcacggagcggaacat
cacacagctgtcgaggccctgcgcaattcagggacggccgtggttatgaccgctctgcga
gaacgcatggttgaaccagagaacgccatcaccaccactccactgagaccagaagatgat
tatttcccccgggagagacggtccagtgggctgcctttcctcctagaccctgcctctccg
gctgtcagcgctggaccgacactgcgactagccacttctctggtccgcaacgataaaggt
ttagggttcagcattgctggagggaaagggtcaaccccgtaccgagtaggagacacggga
atcttcatctctcgtattgctgaaggaggagctgctcacagagacaatatcctgcacgtg
ggagacagggtcatatcaatcaatggtgtagacatgacagaggccagacatgaccaggca
gtagcgctgcttactggcacctcccccaccatcaccctcctggtcgaacgggaccaggcc
agtgcagggggcgcctcccctcgaactcgaccgcattcgccccctcctccagagccgtct
gactcacctgagcaagaggaaggagatgagcaccttggaaaccatctcaactgccccatg
gaggatgaataccccattgaggaagtgacactgatcaaagcaggtggacccctgggtctg
agcattgtagggggtagcgatcatgccagccacccgtttggaattaatgagccaggagtg
ttcatctcaaaggtcatccccaatggcttggcctctcagagtggacttcgggtgggcgat
cgtatcttggaggtgaacaccatcgacctacgacatgccacacatcaggaagctgtcaga
gccctgctctccaacaagcaggagatccgcatgcttgtgcgcagagatccctcgccccct
ggcatgcaggagattgtcattcacaagcagcctggagaaaagctgggcatcagcatcagg
ggtggagctaaaggccatgcaggcaacccctttgaccccacagatgagggcatcttcatt
tccaaggtgagctccagcggagctgctgcacgagatggccgactgcgactaggcatgcgt
attcttgaggtgggcaacaacagtctgctgggtatgacacacacggaagcagtgagggtc
ttgcgtgcttccggtgactccctggtcatgcttgtgtgtgatggctttgacccacgaaac
gctgcaggcatcgaggcatcgcctggtgttattgcaaacccgtttgcggcaggtattgtt
cgtaagaacagtatggagagcatctcatcagtagacagagacctgagtccggaagagatt
gacatcatgcagaaggaggtagagatggtgagagagacgtcccagtgggaacgggaggag
atggaaaaagtggagcgtatgcgcttggagcgcgaggaggcaactcgtttgctggaggag
gaaactgagaatttgagcactggaccactgaaactggactacaagacactggcggctcta
cctaccactagcctacagaaagtgaatagatcttcaccgtctgagcctcacgggattgac
agtcctgtccgagatgctgctcactctccacagaactcacagtcaaacattcatttccct
tcaaatgcaaacaccaaggataattcatcaactaaacctggtgccatccagcctctctct
cgggtgcgacccgctgtgtctccagccagtcaggatggccacagcagtcccaaccctttc
cagcatggcctctctcccatcaactctcagaccactcctagtgccctatcccctgacaca
catgaggaataccccatcaatatcaagcaggtatataaggccttcgcagctgtgccacac
tccctggctgtactggaacccccacaggatctttactctccgcagaactatgtcagcgca
aagcaaccgtcaccagagcctgagctgaataatgaggtgtttatggatgaggctgatggt
gagggcagtggtcctctcaggcctcgtccccccctctcatctgaccgccgcgagtacagg
agcctggcagcagtgccacacctgcctcgcccctcagtggagccgaagaccccctcctct
gttggcagagacagcccagagcagcgctccttcagagacaggcagaaatattttgagatt
gatgtgaagcagcagacaccagacaaacccaaacctcgcatctcacttgtgggagaagat
gacttgaagaaaatgaaagaggaagaagcaaaactaattgaacagagggcacaagagtat
atgctggatgaagatgaggaggatgaggaggaagatctggcgaagcaggtggcagatatg
aaggctcacggaaaggttgtcctagatggtgtggagtacaaggtggagagcttgggaggc
cacagttccccatctccgaggaagtgtgccacacctcccagccactgtggcggctcaggt
aaaggagactctcagcggaattcaatggaagacagcttcagactggaacagagacccaac
tccatgacgggtttgatcccagtttatgccggtgaatctgtggctcccattcggacggcc
aaagcagagcgtagacatcaagaccgattacgcatgcagagcccggagcttgctgtcacc
atggataaggagctatcccctgctgaaaaacgagccctggaagcagagaagagagccatg
tggagagcagccaggatgaagtctctagagcaggatgcgttgaaggcccagatggtcatt
gccaagtctaaagaggggaagaagcgtggcacgttggatcagctgtcagagtcgccgtcc
cctgcgcccacaccctctccaacaccaatagaagatatcagtccacgggcagtgacttca
ccaggcagactgtccctgtcagaaaagaagtttgactaccgacaatttgctgccattcct
tcttccaaacctgtttacgacattcagtctcctggtgcaggtgatgacgtgcacttcatg
gatgatgcctccagtaacccagtgtctgttgtagatccagaagttcctgtggccaccaca
tctgctctagaggagatggctctctacagtaacaagcgcaaactacgacagggccgccac
agcctggaggctccagtgcccacataa
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integrated database retrieval system
