Sinocyclocheilus grahami (golden-line barbel): 107592061
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Entry
107592061 CDS
T04918
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107592061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgh03021
]
107592061
03036 Chromosome and associated proteins [BR:
sgh03036
]
107592061
Transcription machinery [BR:
sgh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107592061
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107592061
PBAF complex
107592061
GBAF(ncBAF) complex
107592061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
SWIRM-assoc_2
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
DUF919
Motif
Other DBs
NCBI-GeneID:
107592061
NCBI-ProteinID:
XP_016136906
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MPSLSTSHCAKCFQDLRPGGALCHILGSLYKFKTEQGWRRFDLQNPSRMDRNVEMFISVE
KTLTQNNLSRPVVYLSPALEQKQALKLKDIVVRHQGTVTEEKSQASHQIYPSPSTADEEE
WFRPVMRLDRQVMVHWGMCPDSYDLLISASDVDGEVEEPPNPDRCWKVHAKWVLDTDTYN
EWMNEEDYEIDENGNSMCFRRRIYQSTEEQKPGKKRRRSPSPPSSESKKKGGKKSSGVYK
RRGQPEEAEPEEDLTKDMEDPTPVPNMEEVILPKNVNLKKDSENTPVKGGIMADLDDQEE
DLLSGVRDEEEQREFGRGMEGEESATEQTHHIIVPTYASWFDYNCIHQIERRALPEFFNG
KNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSASCRRNLTGDVCALIRVHSFLEQWGLINY
QVDAESRPLPMGPPPTPHFNVLTDTPSGLVPLQHRPLQVSASQHMLHFPEKFKEKPSDLQ
NFGLRTDIYAKKHPKSKGASAGREWIEQETLLLLEALEMYKDDWNKVSEHVGSRTQDDCI
LHFLRLPIEDPYLENSEASMGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAA
LEEFSRAREEAPPEIFSASFHKTQQLGHNLDPAFTLQMGSIAGLDPDHSEKTDGSGIEMM
NTEYEQHEKLEGDGILGEGECVKNEEKEESEGERGEESTAEESFDMGLTQGDGEGMKRRV
ALVVVEGNIATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEEL
ETIMDREKEALEQQRQQLLSERQNFHLEQVKYAEMKARQNMEEQQQTGATQSSSSTAYNP
LHHGRSVGSAGTGQVMGARHSGAPNGMYQTPQADGAAPM
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgccatccctgtccacttcccactgtgcaaagtgttttcaggatctaaggccaggcggt
gctctctgccacattctgggatcattgtacaagttcaagacagaacaaggatggaggcgc
tttgatcttcagaacccatccagaatggatcgcaatgtggagatgttcatatctgtggag
aaaactctgacacagaataacttaagcagacctgtggtgtacctgtctcctgctcttgag
cagaagcaagctcttaaactcaaagacattgttgtgcgacaccagggcacagtgacagag
gagaagtcacaagcctcccaccaaatatacccatccccctccacagcagatgaagaagag
tggtttagaccagtcatgcgattggatcggcaagtgatggtgcattggggcatgtgtcca
gacagttatgacttgcttatatcagcaagtgatgtagatggagaagtagaggaacctccc
aacccagacaggtgctggaaggttcatgctaaatgggttcttgacacagacacatataat
gagtggatgaatgaggaagattatgagattgacgagaatgggaatagtatgtgtttcagg
cggcgtatctaccaaagcacagaggaacagaaacctggaaagaagcggcgacgctccccg
tctccgccttcttctgagtctaagaagaaaggaggaaagaaaagctcaggtgtgtataag
aggcgtggtcaaccagaggaagcggagccagaggaggacctcactaaagatatggaagat
cccacacctgtccctaacatggaggaggtcattctgcctaaaaatgtgaacctgaaaaaa
gacagtgaaaacactccagtcaaaggaggcattatggctgatttagatgaccaggaagaa
gacctgctttctggtgtcagagatgaggaggagcagagggagttcggtcgtgggatggag
ggggaggagagtgccacagagcaaacgcatcacatcattgtgcccacctatgcctcctgg
ttcgactacaactgtattcatcagatagagagacgagctctgcctgagttcttcaatggg
aaaaataagtccaaaacaccagaaatatatcttgcataccgcaacttcatgattgataca
taccggctaaaccctcaggagtatttgacctcagcctcctgtagacgaaacctgacagga
gatgtgtgtgcgcttataagggttcattcatttttggagcagtgggggttgatcaactac
caggttgatgcagaaagtcgacccctccccatgggcccgcccccaacaccacactttaat
gttcttacagacacaccgtctggactcgtcccactacagcacagacccttacaggtttcc
gcttctcagcatatgttgcatttcccagaaaaatttaaagaaaagccgtctgacctgcag
aactttggcctgcggactgatatttatgctaagaaacatccaaagagtaaaggtgcaagt
gcagggagagaatggatagaacaggaaacactcttacttttggaggctttggagatgtat
aaagatgattggaataaggtgtccgagcatgtgggcagtcgcacacaggacgactgtatt
cttcacttcttacggttgcccatagaggacccatacctagaaaactctgaagcctcaatg
ggtcctctggcctatcaacctgtccctttcagccagtcagggaatcctgtaatgagcact
gttgcttttcttgcatctgtggttgaccctcgagtggcctctgcagccgccaaggcagct
ttagaggaattctcaagagcaagagaagaggccccaccagagatattcagtgccagcttt
cacaaaacacagcaactcgggcataatttagatccggcctttacactccaaatgggcagc
attgcgggacttgatcctgaccattcagaaaagactgatgggagtggtatagaaatgatg
aacactgaatatgagcagcatgaaaagcttgagggtgacggcatcttgggagagggagag
tgtgtgaagaacgaggagaaagaagagagtgaaggagagaggggagaggagagcacagca
gaggagagttttgacatgggcctcacccaaggggacggggaggggatgaagagaagggtg
gcgcttgtggtggtggagggaaacatcgccacagctgctgctgcagcactggcctccgca
gctaccaaagcaaagcacttggctgcagtagaagagaggaaaatcaaatctctggtggct
ctgctggttgagactcagatgaaaaagttggagatcaaactgagacactttgaagagctg
gagaccattatggatcgagaaaaagaggctctggagcagcagagacagcagttattgtcg
gagaggcagaacttccacctggagcaggtgaaatatgccgagatgaaggcacggcagaac
atggaagagcagcaacaaacaggagctacacagagcagcagtagtacagcatacaaccct
cttcaccatggtcgttcggtgggcagtgctggtactggacaggtcatgggtgctcggcac
tctggagctcccaatggcatgtaccaaactccacaggccgatggggctgcacccatgtaa
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integrated database retrieval system
