Sinocyclocheilus grahami (golden-line barbel): 107592098
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Entry
107592098 CDS
T04918
Name
(RefSeq) non-syndromic hearing impairment protein 5-like
KO
K22146
gasdermin-E
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
107592098
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgh02000
]
107592098
Transporters [BR:
sgh02000
]
Other transporters
Pores ion channels [TC:
1
]
107592098
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Motif
Other DBs
NCBI-GeneID:
107592098
NCBI-ProteinID:
XP_016136960
UniProt:
A0A672SHI6
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MFEKATKKLVQQIDPKGALIAASSLNNSKKLKPLAVVQKIQKGWFWQQTKYKPTEFKLND
LLEGDPIKPVCEEEEFVKFEGEYKISAAGTVEVGCTAVCLNANGQGTSKLCLSLGTLKKE
AVDIPKLVKLTRGRKLDLTGSFFKKLPPKNKVLTLLKERILTTSDCFISYIELEKAGCRA
AIGCTEMHMKDSGKFQYGSKTAFHIPPKTVMAYSVIEMTVESDGYFDLCVGPSGVESDDI
SQNPLPTFSEVDGQWPLTQEGFPLTTLKKALADVQARFCALADLSAESRSSILLLLRKIL
TDRSVLSALVDRLEVLSSGEAPCFLTSELSEEQSQNISAFLDLLKCDQLDKTSSTSLSSY
NGCQISTTNHSDPSLASELIGSSSTPEERNGCHIAVSHENGCSTKASRKNMELMYAMQML
MNALDELMDAELDLLEPFCTSEGLQSLQDLVIHLTTSDMPLCKDTIPVFLQSDNDFHRVE
ELFQSCNVLLRKENDMLTSKITCREGFLPVVLCIAIHGLASFVAA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaaagcgacaaagaagctggtccaacagatagatccgaagggtgctctgatt
gcggcttccagcctaaataattccaaaaaactaaagcctcttgcggtggtgcagaaaatc
cagaaaggctggttctggcagcaaactaaatacaaacccacagaattcaaactcaatgac
ctgctggaaggggatccaattaaaccagtgtgtgaggaggaagagtttgtaaagtttgag
ggagagtacaaaatctctgcagctggaactgtagaggtgggatgtactgctgtctgccta
aatgcgaatggacagggcacatcgaaactttgtttatccctcgggacacttaagaaggaa
gctgtggatattcccaaacttgtgaagctcacaagaggaaggaagttggacctcacaggc
tcttttttcaagaagctacccccaaaaaacaaggttttaaccctccttaaagagcgaatt
ttaaccaccagtgactgctttatctcctacatcgaactggagaaggccggctgccgtgct
gcgattggttgtactgagatgcacatgaaagacagcggtaaatttcaatatggctctaag
actgcatttcacatcccaccgaagactgtgatggcttacagtgtcattgaaatgaccgtc
gaaagtgacggctactttgatttgtgcgttggacccagtggggtggaatcagatgatatt
tcccagaatcccttacccactttctcagaggtggacggtcaatggccacttacccaggaa
ggtttcccacttactactctaaagaaagctcttgcagatgttcaggctagattttgtgca
ctggctgacttgtctgctgaaagccgttcctccattctgctcctgttgaggaaaattctg
acggaccgatctgtcttgtcagctttggtggatagacttgaggtgttaagcagcggtgaa
gctccctgcttcttaaccagcgagttgtctgaagaacagagtcagaacatcagtgcattt
ttagacttactgaagtgtgaccagctagacaagacgtcatcaacgtcattgtcaagttat
aatggatgtcagatatcaacaaccaatcacagcgatccttccttggcatctgagttaatt
ggatcaagctccacaccagaagaacggaatggatgtcacatagccgtatcccatgagaat
ggatgctcaacaaaagcaagcaggaagaacatggagctcatgtatgccatgcaaatgctg
atgaacgctcttgatgagctgatggacgctgaactggacctgctagagccgttctgcact
tctgaaggtctccaaagtctacaggatttagtaattcatctgactacaagcgatatgcct
ctctgcaaggacaccatccctgttttcctccaaagtgacaatgacttccacagagtggag
gaactttttcagtcatgcaatgttttactaaggaaagagaatgacatgttgacctcaaaa
ataacttgtagagagggattcctccctgtggttctgtgcattgccatccatggccttgca
tcctttgttgctgcgtga
DBGET
integrated database retrieval system
