Sinocyclocheilus grahami (golden-line barbel): 107592245
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Entry
107592245 CDS
T04918
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107592245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgh03021
]
107592245
03036 Chromosome and associated proteins [BR:
sgh03036
]
107592245
Transcription machinery [BR:
sgh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107592245
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107592245
PBAF complex
107592245
GBAF(ncBAF) complex
107592245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
HEAT_GCN1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
107592245
NCBI-ProteinID:
XP_016137151
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MATAATAAGGTGSGGPSAGQAGAGSSIGRKKDGGPSSKFWESSETVSQLETVRLWTGKHY
KKYVQTDSPTNKTLAALVVQLLQFQEDAFGRRVSNPALTKLPAKSFLDFKPGGALCHILG
SAYKFKSEQGWRRFDLQNPSRMDRNVEMFMTIEKTLVQNNSLTRPIVYIVSDMEQKQANK
LKDIIKRHQGTITEEKSKATHIIYPSPAQVEEEEWLRPVMRKDKQVLVHWGNYPDSYDTW
VSTNDVDGDVEDAPSSEKPWRVHAKWVIDTDAFNEWMNEEDYEVDESKKPVSFRQRILPG
EEVSSRTPDRKDRKSLVAGKKRRRSPSPPSTPVESRKKGKKGNPGSQGRRRGHQNDDEQD
EDLTKDLEDPSPVPGMEEVTLPKNFNQKKDSENTPVKGGTVADLDDQEDDSLASGGKEED
EQGKTEVNRLIDSEDNVTEQTHHIIIPSYAAWFDYNSIHEIERRALPEFFNGKNKSKTPE
IYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAVMRVHAFLEQWGLVNYQVDAESRP
LPMGPPPTPHFNVLTDTPSGLVPLQHRPPQVPPAQQMLNFPEKGKDKPTDLQNFGLRTDI
YSKKNPKGKGAAAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPI
EDQYLESSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVAAAAAKAALEEFSRVR
EEVPMELVEAHVKKVQEAARSTGKVDPAFGLESSGIAGTAPEEPEKTEPXFTDKLAGDGD
LLPRNRLYXRDAHDNHMRLIAQPYVLYKVFIYIXLCSKLTESVHFCYLVPEKDKDEDMET
TEEGKEGEEEKEEGKKKLELDIREGNIATAAAAALASAATKAKHLAAVEERKIKSLVALL
VETQMKKLELKLRHFEELETIMDREKEALELQRQQLLTERQAFHMEQLKYAEMKARQQIE
QQAAAQQNAGGHHGPSPHGPPPGMHPGHPGHPGHPGPGYPPMHHAMGPHHAPQTGPLVGP
GQPMPGQPIPGRMMPGPPPVGPPQGGMPPMMGPRHPGPPNGMYPGPPPTAQPDGMPPGPV
GPPVSAPPPRAAEN
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcggcaactgcagcgggcggaacgggctccggaggaccatcggccggccag
gcgggcgccggttcctcgattggacggaaaaaagacggagggccttcttccaaattttgg
gagagctcggaaacggtgtcgcagttggagacagttcggctgtggactgggaaacattat
aagaagtatgtccaaaccgactctcctacaaacaaaactttggctgcgctggtggtgcag
ttgctgcagtttcaggaggatgcatttgggcgtcgagtcagcaatcctgctcttaccaaa
ctacctgcaaagagctttctggatttcaaacctggaggagccctttgccacattctgggt
tctgcatacaagttcaaaagtgagcaaggctggaggaggtttgatctgcagaacccatcc
agaatggatagaaacgtggagatgttcatgactattgagaagactcttgttcagaacaac
tctttgacccgaccaattgtgtacattgtgtctgacatggagcaaaagcaagccaataag
ctgaaagacatcattaagagacatcagggaaccatcactgaagaaaagtcaaaggccact
catattatttacccctccccagcccaggtggaagaagaggaatggctacgtcccgtcatg
cgcaaagacaagcaagttttggttcactggggcaattatcctgacagttatgacacatgg
gtatcaacaaatgatgtggatggagatgttgaggatgcaccaagttctgagaaaccatgg
agggtgcatgcaaaatgggtcatcgacacagatgctttcaacgagtggatgaatgaggaa
gattacgaagtggatgagagcaagaaacctgtgagtttccgccaacggatccttccaggg
gaggaagtgtcttcccgtacacctgatcgtaaggaccgcaagtccctggttgccggcaag
aagaggagacgctctccatccccacccagcacccctgtggagtcccgcaaaaagggcaag
aaagggaatcctggatcacaggggaggcgccgtggacatcaaaatgatgacgagcaggat
gaagacctcacaaaggacctggaagatccctcccctgtgccaggaatggaggaagttaca
ttgccaaaaaatttcaatcagaaaaaggacagtgagaacacaccagtgaaaggcggaacg
gttgctgatttggatgaccaggaagatgattcactagcatctggaggcaaggaagaggat
gaacagggcaaaacagaggtcaatcgtctgatcgactctgaggacaacgtgactgaacaa
acccatcacatcattatacccagctatgctgcctggttcgactacaacagtatacatgaa
attgagaggcgtgccctgccagagttcttcaatggcaaaaacaaatctaagactccagag
atctatctggcttatcgtaacttcatgattgacacataccggctgaatcctcaggagtac
ttgacctccacctcctgcaggagaaacctcactggagatgtgtgtgcagtcatgagagtg
catgcctttttggagcagtgggggctggtgaactaccaggttgacgctgagagcagaccc
ctccccatgggccctccaccaacgccacatttcaacgttctgactgatactccctctggg
ttagtgccactgcaacaccgccctccacaggttccccctgctcagcagatgctgaacttc
ccagaaaagggcaaagacaagccaactgacctgcagaactttggcctccgtacagatatt
tactcaaagaagaatcccaagggcaaaggggctgctgctgggagagaatggactgagcaa
gaaacgttgcttctgttggaggctctggagatgtataaggatgactggaataaggtttca
gagcacgtgggcagccgtacacaagatgagtgcatcttgcacttcctgcggctgcccata
gaggatcaatacctggagagctccgaagcctcgctaggccctctggcttaccagccgatc
cccttcagccaatcaggaaatcctgtcatgagcactgttgcatttcttgcctctgtggtc
gacccgcgtgtggcggcggctgctgccaaagcagctttggaggagttctcgcgtgtgcgt
gaggaggttcccatggagctggtggaggctcatgtgaagaaggtacaggaggctgcgcgc
agcacaggaaaagtagaccctgcgttcggcctggagagcagtggcattgctggcacagct
cctgaggaaccagagaaaaccgagccgtagttcactgacaaattagcaggtgatggcgat
ttactaccacgtaaccggctttactgacgagatgcacatgacaatcacatgcgattaatt
gcacagccctatgttctatataaagtgtttatatatatttaattatgctctaaattgact
gagtctgtacatttttgttaccttgttccagagaaagacaaagatgaggacatggagacc
acagaggaagggaaggagggcgaggaagagaaggaagaaggaaagaaaaagcttgagttg
gatatcagagagggcaacatcgccactgccgccgctgctgccctggcctctgctgccact
aaggcaaagcacctggctgcagtggaagagaggaagatcaaatctcttgtggctctgctg
gtagagactcagatgaagaagctggagctcaaactcagacactttgaagagctggagacc
atcatggaccgtgagaaggaagccctggagctccagaggcagcagcttttgacagagcga
caggcattccacatggagcagttgaagtacgctgagatgaaggctcgtcagcagattgag
cagcaggcagctgcgcagcagaatgcaggaggacatcacggaccatctccgcacggcccc
cctccaggcatgcaccctggacacccaggacatcccgggcacccaggccctggatatccc
cccatgcaccatgccatgggtccccaccatgcccctcagacaggaccactggttggacca
ggccagcccatgccaggtcagcctataccaggccgaatgatgcctggacctcccccagtt
ggacccccacagggtggcatgcctcccatgatgggacctcgacaccctggaccacccaac
ggcatgtacccaggtccacctccaaccgcacagcctgatgggatgccccctggcccagtg
ggacctcctgtatctgcgccccctcctcgtgctgctgaaaactaa
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integrated database retrieval system
